mRNA_Ecto-sp13_S_contig17632.5332.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Match: A0A6H5KGW7_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW7_9PHAE) HSP 1 Score: 383 bits (983), Expect = 6.460e-127 Identity = 205/276 (74.28%), Postives = 211/276 (76.45%), Query Frame = 1
Query: 1 QGMHEVLAPLILVLEKE--------------------------------------------------SIVNGEPLNAGTHPAFAAILGHGSTSEDLEADAFWLFSAVMNGLERFYEHGEKATLTSALGAGRGGREWGGVDSPVVEMCKRLQGARMRAADPKLQQHLSHLDISPQAGGRFGCGRRFMQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQGVSTAISLSLSL 678
QGMHEVLAPLILVLEKE SIVNGEPLNAGTHPAFAAILGHGST EDLEADAFWLFSAVM+GLERFYEHGEKAT TSALGAGRGG E G VDSPVVEMCKRLQG RMRAADP+LQQHLSHLDISPQAG +++LYGMKWARLMFGREFRVEGVLVLWDHIFASSWI+GQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQ VSTAISLSLSL
Sbjct: 180 QGMHEVLAPLILVLEKEVAAATRAEAIAGDSTXXXXXXXXXXXXXXXXXXXXXXXXXXVKASPWVGKSIVNGEPLNAGTHPAFAAILGHGSTPEDLEADAFWLFSAVMSGLERFYEHGEKATSTSALGAGRGGGEGGSVDSPVVEMCKRLQGVRMRAADPELQQHLSHLDISPQAG--------YLKLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIEGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQDVSTAISLSLSL 447
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Match: D7FWI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWI0_ECTSI) HSP 1 Score: 184 bits (466), Expect = 4.480e-52 Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 1
Query: 403 FMQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQGVSTAISLSLSL 678
+ QLYGMKWARLMFGREFRVEGVLVLWDHIFASSWI+GQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQGVSTAISLSLSL
Sbjct: 138 YRQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIEGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQGVSTAISLSLSL 229
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Match: A0A8H7PNJ4_9FUNG (Rab-GAP TBC domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PNJ4_9FUNG) HSP 1 Score: 124 bits (312), Expect = 3.890e-29 Identity = 75/225 (33.33%), Postives = 118/225 (52.44%), Query Frame = 1
Query: 1 QGMHEVLAPLILVLEKESIVNGEPLNAGTHPAFAAILGHGSTSEDLEADAFWLFSAVMNGLERFYEHGEKAT------------LTSALGAGRGGREWGGVD-SPVVEMCKRLQGARMRAADPKLQQHLSHLDISPQAGGRFGCGRRFMQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPP 636
QGMHE+LAP+ LVL E + G+ G + ++ + LE D++ LF +M+G +++YE ++ + L +G G G+ +P+V+ C+R+Q +++ DP L QHL L I PQ LYG++W RL+FGREF +E VL LWD IFA P + +E + + +++ IR +++ + CL LLMRYPP
Sbjct: 163 QGMHELLAPIFLVLNTEGVDIGDGSLVGPADSSTKLMAQVLDKKYLEHDSYALFERLMSGAKKWYEFNDEVSTRLTPAKKKELDLIDPMGLGGTGKTAPAAQLTPIVKSCRRIQHQLLKSTDPALYQHLETLGIEPQ-------------LYGIRWIRLLFGREFSIENVLELWDAIFAED-----PSL-NIVEYICLVLLLRIRDKMVDGEYAECLTLLMRYPP 368
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Match: A0A397T3M7_9GLOM (Rab-GAP TBC domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397T3M7_9GLOM) HSP 1 Score: 119 bits (299), Expect = 2.180e-27 Identity = 81/233 (34.76%), Postives = 118/233 (50.64%), Query Frame = 1
Query: 1 QGMHEVLAPLILVLEKESIVN--GEPLNAGTHPAFAAILGHGSTSEDLEADAFWLFSAVMNGLERFYEHGEKATLTSALGAGRGGR-EWGGVD----------SPVVEMCKRLQGARMRAADPKLQQHLSHLDISPQAGGRFGCGRRFMQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQGVSTAI 660
QGMHE+LAP++ V++KESI N G + G L S+ +E D F LFSA+M + +YE+ ++ + +G E+ + +PVV C ++ +R D +L HL +L+I PQ LYG++W RL+FGREF + VLVLWD +FA + ++ V VAM++ IR +LL D CL +LMRYPP V I
Sbjct: 175 QGMHELLAPILWVVDKESIPNSNGYAVENGEDTIIKQTLN----SDFVEHDTFALFSALMKAAKVYYEYNDEVFNRRPVKRAQGSDLEYARIIKDAQAEAAKLTPVVMKCSKIYDEYLRTIDSELYSHLKNLEIEPQ-------------LYGIRWIRLLFGREFPLNKVLVLWDGMFA------EDPTLRIVDFVCVAMMLLIRDELLESDYAECLSMLMRYPPISDVEVLI 384
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Match: U9TLX3_RHIID (Rab-GAP TBC domain-containing protein n=9 Tax=Rhizophagus TaxID=1129544 RepID=U9TLX3_RHIID) HSP 1 Score: 119 bits (298), Expect = 2.940e-27 Identity = 79/231 (34.20%), Postives = 118/231 (51.08%), Query Frame = 1
Query: 1 QGMHEVLAPLILVLEKESIVNGEPLNAGTHPAFAAILGHGSTSEDLEADAFWLFSAVMNGLERFYEHGE----KATLTSALGAG-------RGGREWGGVDSPVVEMCKRLQGARMRAADPKLQQHLSHLDISPQAGGRFGCGRRFMQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQGVSTAI 660
QGMHE+LAP++ V++KESI N + I+ ++ +E D F LFSA+M + +YE+ + K + A G+ + + +PV C ++ ++ DP+L +HL L+I PQ LYG++W RL+FGREF + VL+LWD IFA + +E V VAM++ IR++LL D T CL +LMRYPP I
Sbjct: 161 QGMHELLAPILWVIDKESIPNSS--GYAVENSEDTIIKQTLNADYVEHDTFALFSALMKSAKEYYEYNDEIFNKKPVKRAQGSDLEYARLIKNNQAEVAKATPVFRKCNKIY-EYLQIIDPELYKHLIDLEIEPQ-------------LYGIRWIRLLFGREFPLNKVLILWDGIFA------EDPALRIVEYVCVAMMLLIRNELLDSDYTECLSMLMRYPPTSDTEVLI 369
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Match: A0A2Z6QHF3_9GLOM (Rab-GAP TBC domain-containing protein n=2 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QHF3_9GLOM) HSP 1 Score: 119 bits (298), Expect = 2.950e-27 Identity = 80/229 (34.93%), Postives = 120/229 (52.40%), Query Frame = 1
Query: 1 QGMHEVLAPLILVLEKESIVNGEPLNAGTHPAFAAILGHGSTSEDLEADAFWLFSAVMNGLERFYEHGE----KATLTSALGAG-------RGGREWGGVDSPVVEMCKRLQGARMRAADPKLQQHLSHLDISPQAGGRFGCGRRFMQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPP--DQGV 648
QGMHE+LAP++ V++KESI + + I+ +E +E D F LFSA+M + +YE+ + K + A G+ + + +PV C ++ ++ DP+L + L+ L+I PQ LYG++W RL+FGREF ++ VL LWD IFA + +++V VAM++ IR LL D TGCL +LMRYPP D GV
Sbjct: 161 QGMHELLAPILWVVDKESIPSSNGYAVENNED--TIIKQTLNAEYVEHDTFALFSALMKAAKEYYEYNDEIFNKKPVKRAQGSDLEFARLIKNNQAEVAKATPVFRKCNKIY-EYLQTIDPELHERLNELEIEPQ-------------LYGIRWIRLLFGREFPLDKVLTLWDGIFA------EDPTLRIVDHVCVAMMLLIRDDLLKSDYTGCLSMLMRYPPTSDTGV 367
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Match: A0A7I4YGT4_HAECO (Rab-GAP TBC domain-containing protein n=1 Tax=Haemonchus contortus TaxID=6289 RepID=A0A7I4YGT4_HAECO) HSP 1 Score: 117 bits (294), Expect = 6.900e-27 Identity = 83/230 (36.09%), Postives = 119/230 (51.74%), Query Frame = 1
Query: 1 QGMHEVLAPLILVLEKESIVNGEPLNAGTHPAFA----AILGHGSTSEDLEADAFWLFSAVMNGLERFYEHGEKATLTSALGAGRGGREWGGVDSPVVEMCKRLQ--GARMRAADPKLQQHLSHLDISPQAGGRFGCGRRFMQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQGVSTAISLSL 672
QGMHE+LAPLI VL + L G + +IL H + LE+D++ +F +M + ++YE G + T G +P ++ + L G R++ DP+L +HL+ LDI PQ LYG++W RL+FGREF + +L +WD + + +P V +E V +AM+V IRH LL D GCLQ LMRYPP VST I +L
Sbjct: 159 QGMHEILAPLIFVLFSDQQSFCHCLETGGLTTLSEEDRSILSHVYDPKYLESDSYGMFCEMMLEVTKWYEDGSQPATTPKPFNESGPFMRVQDAAPTNQVMRELVAIGERLQCVDPELAEHLNSLDIPPQ-------------LYGIRWLRLLFGREFAIHDLLYVWDVL-----VCDRP-VARMVECVFLAMLVQIRHLLLQSDYGGCLQYLMRYPPIVDVSTFIQQAL 369
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Match: A0A3N2PMH0_9PEZI (WD repeat domain-containing protein n=1 Tax=Sodiomyces alkalinus F11 TaxID=1314773 RepID=A0A3N2PMH0_9PEZI) HSP 1 Score: 117 bits (293), Expect = 1.310e-26 Identity = 77/212 (36.32%), Postives = 118/212 (55.66%), Query Frame = 1
Query: 1 QGMHEVLAPLILVLEKESIVNGEPLNAGTHPAFAAILGHGSTSEDLEADAFWLFSAVMNGLERFYEHGEKATLTSALGAGRGGREWGGVDSPVVEMCKRLQGARMRAADPKLQQHLSHLDISPQAGGRFGCGRRFMQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPP 636
QGMHE+LAP++ VL ++++ + + T AIL S+ +E DAF LFS +M + FYE + T +++ A RG E S +VE K + + DP+L +HL +++ PQ ++ ++W RL+FGREF + +LVLWD IFA P + E I+ + VAM++ IR +LL D + CLQLL++YPP
Sbjct: 158 QGMHELLAPVVHVLHEDAV---DRRSTTTDTQVDAILLDVFDSDYIEHDAFALFSKIMERAQVFYEVKDSITRSASASASRGQAE----TSAIVEKSKFIHEDCLARVDPELARHLKDVEVLPQ-------------IFLIRWIRLLFGREFPFDQLLVLWDTIFAID-----PSL-ELIDLICVAMLIRIRWKLLEADYSVCLQLLLKYPP 343
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Match: A0A397GIP1_9GLOM (Rab-GAP TBC domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397GIP1_9GLOM) HSP 1 Score: 116 bits (291), Expect = 2.600e-26 Identity = 79/230 (34.35%), Postives = 118/230 (51.30%), Query Frame = 1
Query: 1 QGMHEVLAPLILVLEKESI--VNGEPLNAGTHPAFAAILGHGSTSEDLEADAFWLFSAVMNGLERFYEHGE-------KATLTSALGAGRGGREWGGVDSPVVEMCKRLQGARMRAADPKLQQHLSHLDISPQAGGRFGCGRRFMQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQGVSTAIS 663
QGMHE+LAP++ V++ ESI NG + I+ S+ +E D F LFS++M + YE+ + K + + L R +E +PVV C ++ ++ DP L HL++L+I PQ LYG++W RL+FGREF +E VL+LWD +FA + ++ V + M++ IR +LL D GCL LMRYPP V +S
Sbjct: 164 QGMHELLAPILWVVDDESIPSANGYAVENDE----ITIIRQTLNSDYVEHDTFVLFSSLMKAAKINYEYNDEVFNRRPKRSQGTDLDYSRMIKEEAAKLTPVVMRCNKIYEEYLQKIDPDLFLHLNNLEIEPQ-------------LYGIRWVRLLFGREFTLEKVLILWDGMFA------EDPTLRIVDFVCLTMMLLIRDELLESDYAGCLSKLMRYPPIDEVELLVS 370
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Match: A0A1L9SW47_9EURO (Rab-GAP TBC domain-containing protein n=1 Tax=Penicilliopsis zonata CBS 506.65 TaxID=1073090 RepID=A0A1L9SW47_9EURO) HSP 1 Score: 116 bits (290), Expect = 3.220e-26 Identity = 75/214 (35.05%), Postives = 112/214 (52.34%), Query Frame = 1
Query: 1 QGMHEVLAPLILVLEKESIVNGEPLNAGTHPAFAAILGHGSTSEDLEADAFWLFSAVMNGLERFYEHGEKATLTSALGAGRGGREWGGVDSPVVEMCKRLQGARMRAADPKLQQHLSHLDISPQAGGRFGCGRRFMQLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIKGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYP-PD 639
QGMHE+LAP++ V+++++ V+ L G +L + +E D+F LF VM L +YEH E+ +++ +G SP+V C+ LQ + + A DP L HL +DI PQ ++ +W RL+FGREF + VLV+WDH+FA + +E VAM++ IR QLL D + L L+RYP PD
Sbjct: 157 QGMHEILAPILWVVDRDT-VDKSSLGDGLGEQNGDVLQL-LDPDYIEHDSFTLFCTVMQTLRVYYEHKEQRSISGQVGV-----------SPIVSRCQNLQTSMLAATDPDLSNHLQAVDILPQ-------------IFLTRWIRLLFGREFPFDDVLVVWDHLFAEGLRT------DLVEFFCVAMLLRIRWQLLEADYSTALSTLLRYPSPD 338 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17632.5332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17632.5332.1 >prot_Ecto-sp13_S_contig17632.5332.1 ID=prot_Ecto-sp13_S_contig17632.5332.1|Name=mRNA_Ecto-sp13_S_contig17632.5332.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=224bp MHEVLAPLILVLEKESIVNGEPLNAGTHPAFAAILGHGSTSEDLEADAFWback to top mRNA from alignment at Ecto-sp13_S_contig17632:146..1710+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17632.5332.1 ID=mRNA_Ecto-sp13_S_contig17632.5332.1|Name=mRNA_Ecto-sp13_S_contig17632.5332.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1565bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17632:146..1710+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17632:146..1710+ >mRNA_Ecto-sp13_S_contig17632.5332.1 ID=mRNA_Ecto-sp13_S_contig17632.5332.1|Name=mRNA_Ecto-sp13_S_contig17632.5332.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=672bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17632:146..1710+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |