prot_Ecto-sp13_S_contig176.5314.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig176.5314.1
Unique Nameprot_Ecto-sp13_S_contig176.5314.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length585
Homology
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 931 bits (2407), Expect = 0.000e+0
Identity = 507/570 (88.95%), Postives = 516/570 (90.53%), Query Frame = 0
Query:   16 TDTTXXXXXGTKSVASTATSCGGVASGYYCCNAGCGTCGGXXXXXXXXXXXXXXXXLSXXXXXXXSPCLMEXXXXXXXXXXXXXXXXXXXXXXXXXCTDYSKSTVTIEIKNNVETSSKKN-GGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDYMKTYDSLPDLC 584
            T TT     GT    +TATSC GV+ G YCCNAGCGTCGGXXXXXXXXXXXXXXXX  XXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXX                         GGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEE SLLQVHGPDAGGDARVLRIQSTGS DYYEIRGHGGSLSFMDTKVTSWDTDEK+VNTNY+KERSFIRCVSEELAD PDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPE+FERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVW NTVYDM+DAGMAIMESMGAHI+DNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGND+PEASK WDGLLVDNTFHANTVEGGVKIQKAEGI FTDN FYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKN DYMK+YDSLPDLC
Sbjct:  276 TTTTTDTTSGTSVADATATSCDGVSKGAYCCNAGCGTCGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTVEGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNIDYMKSYDSLPDLC 845          
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D8LDB5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB5_ECTSI)

HSP 1 Score: 918 bits (2373), Expect = 0.000e+0
Identity = 497/629 (79.01%), Postives = 506/629 (80.45%), Query Frame = 0
Query:    1 MDSAIPATTTDVIDNTDTTXXXXXGTKSVASTATSCGGVASGYYCCNAGCGTCGGXXXXXXXXXXXXXXXXLSXXXXXXXSPCLMEXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------CTDYSKSTVTIEIKNNVETSSKKNGGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDYMKTYDSLPDLC 584
            MDSAIPATTTD+IDNTDTTXXXXX    VASTATSCGGVASGYYCCNAGCGTCGG XXXXXX         LS       SPCLME    XXXXXXXXXXXXXXXXXXX                                               CTDYSKSTVTIEIKNNV+TSSKKNGGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQST S+DYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNY KERSF+RCVSEELADNPDTCDGHAVNHMGECRM                                         VRGDIIDS+IYGMYYGHYSFGHDGGIWTGN+MHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGA+RN+VENN F ECDQYGIYTYQGNDEPEASK WDGLLVDNTFHANTVEGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNN VPD ICLKGD NTDY K+YDSLPD C
Sbjct:  319 MDSAIPATTTDIIDNTDTTXXXXXXXXXVASTATSCGGVASGYYCCNAGCGTCGGTXXXXXXDGCCASDAALSLCSATGMSPCLMETSSTXXXXXXXXXXXXXXXXXXXGSVAXXXTSCGGVAKGAYCCNAGASTTTTTTVDGXXXXXXXXXXXXTCTDYSKSTVTIEIKNNVQTSSKKNGGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTASNDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYNKERSFVRCVSEELADNPDTCDGHAVNHMGECRM-----------------------------------------VRGDIIDSNIYGMYYGHYSFGHDGGIWTGNQMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGASRNVVENNKFSECDQYGIYTYQGNDEPEASKDWDGLLVDNTFHANTVEGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNLVPDGICLKGDDNTDYFKSYDSLPDTC 906          
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 472 bits (1215), Expect = 7.730e-157
Identity = 249/447 (55.70%), Postives = 303/447 (67.79%), Query Frame = 0
Query:  140 YIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDP------NPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEG-----GVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDYMK 575
            Y  GGGC TLT +Y AQ G   DGPL+VLD N++VVGG+PTGYWLL R++ V + S L VHG  A GDA VLR+ ST S D+ E+RG+GG+L F  T VTSWDTD  +        RSFI CV++        CDG +    GECRMDII S MG MG+  AESYG++WKVRG C  DP      N E+FE   V GDI++S+IYGMYYGHYS+GH GG+W  N M DN QYGFDPHDDSD+L I+ N V+GNGNHGIIASKRCNNVKI +N VYDGGE AVGIFLHRSSD  EV +N VY+M+DAGMA+MES  A+IYDN+FTN +YGIRLS+G+ RNI+ NN F    QYG+YTY G+D+P+     +G   DN F  NT+E      GV I++ +   F DN F   S+   Y FED  D  W +N      CL G  +TD+ +
Sbjct:  192 YFEGGGCGTLTQMYEAQEG---DGPLYVLDENNDVVGGTPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNS-NGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVST---YEFEDSSDTTWVDNTGGG--CLDG--STDFAE 626          
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 442 bits (1136), Expect = 1.480e-147
Identity = 233/450 (51.78%), Postives = 297/450 (66.00%), Query Frame = 0
Query:  143 GGGCATLTDIYTAQGGHNDD---GPLFVLDSNDNV--VGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTV---EGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDYMKTYDSLPDLC 584
            GGGC TL+D+Y  QG +N+    GP+FVLDSND V     + TG WLL  D+ V   + L   G   GG+   LRI+ST  SD++EIRGHGG+L F DT VTSWD D ++    Y+  RSFIRCVSE L    DTC   A+N+MGECRMDII SEMG +GYDA+E+YGI+WKVRG+CS+  NP++F+   V GD+  SDI+ MYYG YSFGH GG+WT N MHDN QYGFDPHDDSD L IA N V+ N NHGIIASKRCNNVKI+ N VYDGG  A GIFLHRS DD EV+ NT+ +M DAG+A++E+ G  I+DN     ++GIR+ +G++ N V +N F      G++TY G+DEP    G      DN F+ NT+   E GVKI++++ I+ T+N F   S   E  F +  D+VW+ N +P + CL+   N         LP  C
Sbjct:    8 GGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLT-GEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGGG---RPCDNEFYNNTIQATETGVKIKESDNISITNNAF---SGTTEIEFNNAIDIVWSGNSIPTNTCLEDIDNNSTFTGSSGLPLEC 447          
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 449 bits (1155), Expect = 1.110e-144
Identity = 230/455 (50.55%), Postives = 299/455 (65.71%), Query Frame = 0
Query:  137 GKNYIRGGGCATLTDIYTAQGGHNDD---GPLFVLDSNDNV--VGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEG---GVKIQKAEGIAFTDNKFYEHS--SGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDYMKTYDSLP 581
            G+ Y  G GC T+TD+Y  +G  ND    GP+++LD +     +    T  WLL  ++++    +    G  AGGD   LRIQSTGS D++E+RGHGGSL F DT VTSWDT  KE    YE  RSF+ CVSE+L    D C+G+A N MGECRMDII SE+  +GY  +ESYG++WKVRG+C +  NPE+FE T V GD+  SDI+ +YYGHYS+GH GG+WT NKMHDN QYGFDPHDDSD L IAYN V+ N NHGIIASKRCNNVKI  N V DGG  A GIFLHRSSD   V++NT+ +M+DAG+A++ES  A IY N     KYGIR+S+G+  N V  NSF +  QYG+YTY+G+DEP+ S   DG    N    N VE    GVKI++ +     DN+FY+++  + + + F +  + +W+ N + D  C++ D   D     DS+P
Sbjct:  440 GRLYAEGEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTG--DDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS---DGRPSGNVLALNLVEDCPIGVKIKEGD-----DNEFYQNTFINVDAFEFPESTNTMWSGNDIGDG-CIEEDDEFDAASGSDSIP 883          
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 412 bits (1058), Expect = 1.530e-135
Identity = 214/438 (48.86%), Postives = 282/438 (64.38%), Query Frame = 0
Query:  145 GCATLTDIYTAQGGHNDD---GPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVR---------GYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVE---GGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICL 565
            GC TLTD+Y  +G  ND    GPL++LD + + +    S T  WLL  +++V   ++    G + GGD   LRIQSTG  D+YE+RGHGGS+ F  T VTSWDT  K+    YE  RSF+ CVSE+L    +TCDG A N MGECRMDII SEMG MG+  +ESYG++WKVR         G+C +  NP++FE T V GDI +SDI+ MYYGHYS+GH GG+WT N+MHDN QY            +A N V+ N NHGIIASKRCNNVKI+ N V DGG  AVGIFLHRSSD+ EV+ N +++M DAG+A++ES  A I+DN    V++GIR+S+G+  N V +N F +C  +G+YTY G+DEP+ S G       NTF+ N V    GGVK + ++ I  T+N+F   +  EE  F D +   W+ N +P  +C+
Sbjct:   21 GCFTLTDLYNFRGTENDGSSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTG--ETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSNG---RPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEF---TGTEELEFYDAQATTWSGNSLPSGVCI 438          
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 409 bits (1052), Expect = 7.990e-130
Identity = 266/550 (48.36%), Postives = 331/550 (60.18%), Query Frame = 0
Query:   36 CGGVASGYYCCNAGCGTCGGXXXXXXXXXXXXXXXXLSXXXXXXX----SPCLMEXXXXXXXXXXXXXXXXXXXXXXXXXCTDYSKSTVTIEIKNNVETSSKKNGGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGG-----SPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEG---GVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDY 573
            C GV  G YCC+AGCG CGGXXXXXXXX         S           +PC+++          XXXXXXXXXXXXXXX      S         + TSS  +       GGGCATLTD+Y  Q G    GPL+VLDS++N+V G     SPTGYWLL   + + +   L VHG  AGGDA VLRIQST   D++EIRG GGSLSF++T VTSWDTD+ E  T YE  RSFI CV++    +  +C G +    GECRMDII S MG MG+  AESYG++WKVRG CS+  N E+ +   V GDI  S+IYGMYYG YS+GH GG+WT N M DN  YGFDPHDDSD+L IA NTV+GNGNHGIIASKRCNNV+I+                                      A+MES  A IYDNT  N KYGIRLS+G+A N + +N+F     YG+YTY+G+D+P+ S G DG + DN+F ANT+      +KI++ +  +FT+N F    + + + FED  D VWTNN +    CL  D++TD+
Sbjct:  314 CDGVLKGDYCCSAGCGECGGXXXXXXXXGLTGADCCTSDISNLCSVTGAAPCIVDGDSTGPTPTPXXXXXXXXXXXXXXXXXGTIAS---------ISTSSDSSS----FSGGGCATLTDMYNTQSGS---GPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVYGNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVS-GNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVF---ENVKTFEFEDSTDTVWTNNDIGGG-CL--DESTDF 837          
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 395 bits (1016), Expect = 2.030e-128
Identity = 211/447 (47.20%), Postives = 277/447 (61.97%), Query Frame = 0
Query:  143 GGGCATLTDIYT--AQGGHNDDGPLFVLDSNDNVVGGSP--TGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHAN---TVEGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTD----YMKTYD 578
            G GC T+TD+Y    +   +  GP+F LD + N V      +  WLL  ++H+   ++    G   GGD   LRIQSTG +D++E+R HGGS+ F  T VTSWDT  K     Y   RSF+ CVSE+L    + C G A N MGECRMDII SE+G +GY  +ESYG++WKVRG+C +  NP++F+ T V G++I SDI+  YYG YS+GH GG+W  N+MHDN QYGFDPHDDSD L              IIASKRCNNV+I++N VYDGG  A GIFLHRSSD   V +N V+DM+DAGMA++ESM A IY+N F++VK+GIRLS+G++ N V  N F +    G+YTYQG+DEP      DG   DN F  N    V  GVKI++ +    TDN F   +   E  F D ++  W  N +P  +C+K   + D     + T+D
Sbjct:   84 GEGCFTITDLYNFRLESDGSAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTG--EVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVS-DGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVF---TGTSELEFFDAQNTRWKGNTLPQGVCIKNIHSDDGIDIELSTFD 512          
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 378 bits (971), Expect = 2.370e-122
Identity = 207/464 (44.61%), Postives = 276/464 (59.48%), Query Frame = 0
Query:  118 STVTIEIKNNVETSSKKNGGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEGGVK---IQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDYMKTYD 578
            S++ + ++ N E++       N    GGC TL  I+  Q    D  PL+ +D     V  S TG WLL  +++VE+   LQVHG  AGGDA  LR+ ST S  +  +R +GGSL F+ TKV +WDT +   + +    RS+I  VSE + D+  TC+G A N+MGE RMDI  SEM  +GY   E+YG++WKVRG+C +  NPELF+   V G+I DSDI+   +G Y++GH  G W  NKMHDN+ YGFDPHDDSD L I  N VW NG HGIIASKRCN V I  N VY G  G+ GIFLHRSSD+  V  N V+D  DAG+A++ES  A + DNTF N KYG+RLSVG  RNI   N      ++  ++Y G D+PE      G   DN F  N + GGV+   +++A+G  F DN F + ++    RF D    + + N    D  LK D+   + ++ D
Sbjct:   12 SSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQ---VDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLST-SDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDS--GRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAA---IRFVDATKTLMSGNTGLADSTLKVDRGATFDESSD 466          
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 1.610e-121
Identity = 202/444 (45.50%), Postives = 271/444 (61.04%), Query Frame = 0
Query:  144 GGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEGG---VKIQKAEGIAFTDNKF-YEHSSGEEYRFEDCEDVVWTNN----------RVPDDICLKGDKNTDY 573
            GGCATL  I+ ++ G     PL+ +D +   V  + TG WLL  +++VE+   L+V+G D GGDA  LR+ ST S  Y  +R HGGSL F+ TKV SWDT     + +    RS+I  VSE + D  +TC+G+A N MGE RMDI  SE+G +G+  +ESYG++WKVRG+C +  NPE+F+   V G++ DSDI+ + +G Y++GH  G W  NKMHDN+ YGFDPHDDSD L I  N V+ NG HGIIASKRCN V I  N VY G E + GIFLHRSSDD  V  N V+D  DAG+A++ES  A + +NTF N KYG+R+SVG A N+   N      +Y  YTY G+DEP+      G   +N F  N+  G    +KI++A+G  F DN F    + G   RF+D  + V   N          +V +D C  G+ ++ Y
Sbjct:   71 GGCATLGQIWESRAGK---APLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLST-SETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSS--GRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGY 508          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNF5_9PHAE0.000e+088.95MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D8LDB5_ECTSI0.000e+079.01Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G8D9_ECTSI7.730e-15755.70Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FRR8_ECTSI1.480e-14751.78Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LC73_ECTSI1.110e-14450.55Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
A0A6H5JGU8_9PHAE1.530e-13548.86MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FWE8_ECTSI7.990e-13048.36Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D8LRM4_ECTSI2.030e-12847.20Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
Q7XAJ8_9PHAE2.370e-12244.61Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
D7FXE4_ECTSI1.610e-12145.50Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 373..395
e-value: 34.0
score: 13.3
coord: 327..357
e-value: 8600.0
score: 0.6
coord: 469..491
e-value: 66.0
score: 12.4
coord: 446..467
e-value: 18.0
score: 14.3
coord: 423..445
e-value: 1400.0
score: 6.1
coord: 501..524
e-value: 920.0
score: 7.5
coord: 397..421
e-value: 24.0
score: 13.8
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 86..501
e-value: 7.9E-86
score: 290.4
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 417..540
e-value: 2.3E-13
score: 50.3
NoneNo IPR availablePANTHERPTHR22990:SF15F-BOX ONLY PROTEIN 10coord: 332..552
NoneNo IPR availablePANTHERPTHR22990F-BOX ONLY PROTEINcoord: 332..552
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 331..537

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig176contigEcto-sp13_S_contig176:26407..34314 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig176.5314.1mRNA_Ecto-sp13_S_contig176.5314.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig176 25406..34404 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig176.5314.1 ID=prot_Ecto-sp13_S_contig176.5314.1|Name=mRNA_Ecto-sp13_S_contig176.5314.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=585bp
MDSAIPATTTDVIDNTDTTTDTTGGTKSVASTATSCGGVASGYYCCNAGC
GTCGGTGCGTRGDGCCASDAALSLCSATGMSPCLMESASTTTTTTVDGTT
TTTGGTTFTSTCTDYSKSTVTIEIKNNVETSSKKNGGKNYIRGGGCATLT
DIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVH
GPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNT
NYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDA
AESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHD
GGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNV
KIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAH
IYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASK
GWDGLLVDNTFHANTVEGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCE
DVVWTNNRVPDDICLKGDKNTDYMKTYDSLPDLC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR039448Beta_helix
IPR011050Pectin_lyase_fold/virulence