mRNA_Ecto-sp13_S_contig176.5314.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 967 bits (2501), Expect = 0.000e+0 Identity = 536/641 (83.62%), Postives = 546/641 (85.18%), Query Frame = 1
Query: 1 GTGCGGRGEGCCTSDAALSLCSVTGKSPCLMDSAIPATTTDVIDN--------------------------TDTTXXXXXGTKSVASTATSCGGVASGYYCCNAGCGTCGGXXXXXXXXXXXXXXXXLSXXXXXXXSPCLMEXXXXXXXXXXXXXXXXXXXXXXXXXCTDYSKSTVTIEIKNNVETSSKKN-GGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDYMKTYDSLPDLC 1842
GTGCG RG+GCCTSDAALSLCSVTG SPCLMD T TT GT +TATSC GV+ G YCCNAGCGTCGGXXXXXXXXXXXXXXXX XXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX GGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEE SLLQVHGPDAGGDARVLRIQSTGS DYYEIRGHGGSLSFMDTKVTSWDTDEK+VNTNY+KERSFIRCVSEELAD PDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPE+FERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVW NTVYDM+DAGMAIMESMGAHI+DNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGND+PEASK WDGLLVDNTFHANTVEGGVKIQKAEGI FTDN FYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKN DYMK+YDSLPDLC
Sbjct: 205 GTGCGMRGDGCCTSDAALSLCSVTGMSPCLMDCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTTTTTDTTSGTSVADATATSCDGVSKGAYCCNAGCGTCGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTVEGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNIDYMKSYDSLPDLC 845
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D8LDB5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB5_ECTSI) HSP 1 Score: 964 bits (2493), Expect = 0.000e+0 Identity = 520/652 (79.75%), Postives = 529/652 (81.13%), Query Frame = 1
Query: 22 GEGCCTSDAALSLCSVTGKSPCLMDSAIPATTTDVIDNTDTTXXXXXGTKSVASTATSCGGVASGYYCCNAGCGTCGGXXXXXXXXXXXXXXXXLSXXXXXXXSPCLMEXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------CTDYSKSTVTIEIKNNVETSSKKNGGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDYMKTYDSLPDLC 1842
GEGCCTSDAALSLCSVTGKSPCLMDSAIPATTTD+IDNTDTTXXXXX VASTATSCGGVASGYYCCNAGCGTCGG XXXXXX LS SPCLME XXXXXXXXXXXXXXXXXXX CTDYSKSTVTIEIKNNV+TSSKKNGGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQST S+DYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNY KERSF+RCVSEELADNPDTCDGHAVNHMGECRM VRGDIIDS+IYGMYYGHYSFGHDGGIWTGN+MHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGA+RN+VENN F ECDQYGIYTYQGNDEPEASK WDGLLVDNTFHANTVEGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNN VPD ICLKGD NTDY K+YDSLPD C
Sbjct: 296 GEGCCTSDAALSLCSVTGKSPCLMDSAIPATTTDIIDNTDTTXXXXXXXXXVASTATSCGGVASGYYCCNAGCGTCGGTXXXXXXDGCCASDAALSLCSATGMSPCLMETSSTXXXXXXXXXXXXXXXXXXXGSVAXXXTSCGGVAKGAYCCNAGASTTTTTTVDGXXXXXXXXXXXXTCTDYSKSTVTIEIKNNVQTSSKKNGGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTASNDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYNKERSFVRCVSEELADNPDTCDGHAVNHMGECRM-----------------------------------------VRGDIIDSNIYGMYYGHYSFGHDGGIWTGNQMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGASRNVVENNKFSECDQYGIYTYQGNDEPEASKDWDGLLVDNTFHANTVEGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNLVPDGICLKGDDNTDYFKSYDSLPDTC 906
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 472 bits (1215), Expect = 4.870e-152 Identity = 249/447 (55.70%), Postives = 303/447 (67.79%), Query Frame = 1
Query: 508 YIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDP------NPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEG-----GVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDYMK 1815
Y GGGC TLT +Y AQ G DGPL+VLD N++VVGG+PTGYWLL R++ V + S L VHG A GDA VLR+ ST S D+ E+RG+GG+L F T VTSWDTD + RSFI CV++ CDG + GECRMDII S MG MG+ AESYG++WKVRG C DP N E+FE V GDI++S+IYGMYYGHYS+GH GG+W N M DN QYGFDPHDDSD+L I+ N V+GNGNHGIIASKRCNNVKI +N VYDGGE AVGIFLHRSSD EV +N VY+M+DAGMA+MES A+IYDN+FTN +YGIRLS+G+ RNI+ NN F QYG+YTY G+D+P+ +G DN F NT+E GV I++ + F DN F S+ Y FED D W +N CL G +TD+ +
Sbjct: 192 YFEGGGCGTLTQMYEAQEG---DGPLYVLDENNDVVGGTPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNS-NGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVST---YEFEDSSDTTWVDNTGGG--CLDG--STDFAE 626
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 442 bits (1136), Expect = 6.520e-143 Identity = 233/450 (51.78%), Postives = 297/450 (66.00%), Query Frame = 1
Query: 517 GGGCATLTDIYTAQGGHNDD---GPLFVLDSNDNV--VGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTV---EGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDYMKTYDSLPDLC 1842
GGGC TL+D+Y QG +N+ GP+FVLDSND V + TG WLL D+ V + L G GG+ LRI+ST SD++EIRGHGG+L F DT VTSWD D ++ Y+ RSFIRCVSE L DTC A+N+MGECRMDII SEMG +GYDA+E+YGI+WKVRG+CS+ NP++F+ V GD+ SDI+ MYYG YSFGH GG+WT N MHDN QYGFDPHDDSD L IA N V+ N NHGIIASKRCNNVKI+ N VYDGG A GIFLHRS DD EV+ NT+ +M DAG+A++E+ G I+DN ++GIR+ +G++ N V +N F G++TY G+DEP G DN F+ NT+ E GVKI++++ I+ T+N F S E F + D+VW+ N +P + CL+ N LP C
Sbjct: 8 GGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLT-GEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGGG---RPCDNEFYNNTIQATETGVKIKESDNISITNNAF---SGTTEIEFNNAIDIVWSGNSIPTNTCLEDIDNNSTFTGSSGLPLEC 447
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 449 bits (1154), Expect = 7.520e-140 Identity = 230/455 (50.55%), Postives = 299/455 (65.71%), Query Frame = 1
Query: 499 GKNYIRGGGCATLTDIYTAQGGHNDD---GPLFVLDSNDNV--VGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEG---GVKIQKAEGIAFTDNKFYEHS--SGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDYMKTYDSLP 1833
G+ Y G GC T+TD+Y +G ND GP+++LD + + T WLL ++++ + G AGGD LRIQSTGS D++E+RGHGGSL F DT VTSWDT KE YE RSF+ CVSE+L D C+G+A N MGECRMDII SE+ +GY +ESYG++WKVRG+C + NPE+FE T V GD+ SDI+ +YYGHYS+GH GG+WT NKMHDN QYGFDPHDDSD L IAYN V+ N NHGIIASKRCNNVKI N V DGG A GIFLHRSSD V++NT+ +M+DAG+A++ES A IY N KYGIR+S+G+ N V NSF + QYG+YTY+G+DEP+ S DG N N VE GVKI++ + DN+FY+++ + + + F + + +W+ N + D C++ D D DS+P
Sbjct: 440 GRLYAEGEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTG--DDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS---DGRPSGNVLALNLVEDCPIGVKIKEGD-----DNEFYQNTFINVDAFEFPESTNTMWSGNDIGDG-CIEEDDEFDAASGSDSIP 883
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 426 bits (1096), Expect = 8.450e-132 Identity = 292/620 (47.10%), Postives = 366/620 (59.03%), Query Frame = 1
Query: 1 GTGCGGRGEG-----CCTSDAALSLCSVTGKSPCLMDSAIPATTTDVIDNTDTTXXXXXGTKSVASTATSCGGVASGYYCCNAGCGTCGGXXXXXXXXXXXXXXXXLSXXXXXXX----SPCLMEXXXXXXXXXXXXXXXXXXXXXXXXXCTDYSKSTVTIEIKNNVETSSKKNGGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGG-----SPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEG---GVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDY 1809
G+GC RG G CCTSD + +LCSVTG +PC++D DT+ XXX + + T C GV G YCC+AGCG CGGXXXXXXXX S +PC+++ XXXXXXXXXXXXXXX S + TSS + GGGCATLTD+Y Q G GPL+VLDS++N+V G SPTGYWLL + + + L VHG AGGDA VLRIQST D++EIRG GGSLSF++T VTSWDTD+ E T YE RSFI CV++ + +C G + GECRMDII S MG MG+ AESYG++WKVRG CS+ N E+ + V GDI S+IYGMYYG YS+GH GG+WT N M DN YGFDPHDDSD+L IA NTV+GNGNHGIIASKRCNNV+I+ A+MES A IYDNT N KYGIRLS+G+A N + +N+F YG+YTY+G+D+P+ S G DG + DN+F ANT+ +KI++ + +FT+N F + + + FED D VWTNN + CL D++TD+
Sbjct: 259 GSGCSDRGGGLTGADCCTSDIS-NLCSVTGAAPCIVDG-------------DTSPTXXXXXXXXSGSFT-CDGVLKGDYCCSAGCGECGGXXXXXXXXGLTGADCCTSDISNLCSVTGAAPCIVDGDSTGPTPTPXXXXXXXXXXXXXXXXXGTIAS---------ISTSSDSSS----FSGGGCATLTDMYNTQSGS---GPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVYGNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVS-GNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVF---ENVKTFEFEDSTDTVWTNNDIGGG-CL--DESTDF 837
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 412 bits (1059), Expect = 3.220e-131 Identity = 215/445 (48.31%), Postives = 284/445 (63.82%), Query Frame = 1
Query: 523 GCATLTDIYTAQGGHNDD---GPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVR---------GYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVE---GGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTD 1806
GC TLTD+Y +G ND GPL++LD + + + S T WLL +++V ++ G + GGD LRIQSTG D+YE+RGHGGS+ F T VTSWDT K+ YE RSF+ CVSE+L +TCDG A N MGECRMDII SEMG MG+ +ESYG++WKVR G+C + NP++FE T V GDI +SDI+ MYYGHYS+GH GG+WT N+MHDN QY +A N V+ N NHGIIASKRCNNVKI+ N V DGG AVGIFLHRSSD+ EV+ N +++M DAG+A++ES A I+DN V++GIR+S+G+ N V +N F +C +G+YTY G+DEP+ S G NTF+ N V GGVK + ++ I T+N+F + EE F D + W+ N +P +C+ + D
Sbjct: 21 GCFTLTDLYNFRGTENDGSSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTG--ETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSNG---RPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEF---TGTEELEFYDAQATTWSGNSLPSGVCIDNITSDD 445
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 395 bits (1016), Expect = 4.720e-124 Identity = 209/437 (47.83%), Postives = 273/437 (62.47%), Query Frame = 1
Query: 517 GGGCATLTDIYT--AQGGHNDDGPLFVLDSNDNVVGGSP--TGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHAN---TVEGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTD 1806
G GC T+TD+Y + + GP+F LD + N V + WLL ++H+ ++ G GGD LRIQSTG +D++E+R HGGS+ F T VTSWDT K Y RSF+ CVSE+L + C G A N MGECRMDII SE+G +GY +ESYG++WKVRG+C + NP++F+ T V G++I SDI+ YYG YS+GH GG+W N+MHDN QYGFDPHDDSD L IIASKRCNNV+I++N VYDGG A GIFLHRSSD V +N V+DM+DAGMA++ESM A IY+N F++VK+GIRLS+G++ N V N F + G+YTYQG+DEP DG DN F N V GVKI++ + TDN F + E F D ++ W N +P +C+K + D
Sbjct: 84 GEGCFTITDLYNFRLESDGSAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTG--EVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVS-DGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVF---TGTSELEFFDAQNTRWKGNTLPQGVCIKNIHSDD 502
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 378 bits (971), Expect = 4.150e-118 Identity = 207/464 (44.61%), Postives = 276/464 (59.48%), Query Frame = 1
Query: 442 STVTIEIKNNVETSSKKNGGKNYIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEGGVK---IQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNTDYMKTYD 1824
S++ + ++ N E++ N GGC TL I+ Q D PL+ +D V S TG WLL +++VE+ LQVHG AGGDA LR+ ST S + +R +GGSL F+ TKV +WDT + + + RS+I VSE + D+ TC+G A N+MGE RMDI SEM +GY E+YG++WKVRG+C + NPELF+ V G+I DSDI+ +G Y++GH G W NKMHDN+ YGFDPHDDSD L I N VW NG HGIIASKRCN V I N VY G G+ GIFLHRSSD+ V N V+D DAG+A++ES A + DNTF N KYG+RLSVG RNI N ++ ++Y G D+PE G DN F N + GGV+ +++A+G F DN F + ++ RF D + + N D LK D+ + ++ D
Sbjct: 12 SSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQ---VDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLST-SDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDS--GRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAA---IRFVDATKTLMSGNTGLADSTLKVDRGATFDESSD 466
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 377 bits (969), Expect = 2.790e-117 Identity = 202/444 (45.50%), Postives = 271/444 (61.04%), Query Frame = 1
Query: 520 GGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTGSSDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYEKERSFIRCVSEELADNPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPELFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDEPEASKGWDGLLVDNTFHANTVEGG---VKIQKAEGIAFTDNKF-YEHSSGEEYRFEDCEDVVWTNN----------RVPDDICLKGDKNTDY 1809
GGCATL I+ ++ G PL+ +D + V + TG WLL +++VE+ L+V+G D GGDA LR+ ST S Y +R HGGSL F+ TKV SWDT + + RS+I VSE + D +TC+G+A N MGE RMDI SE+G +G+ +ESYG++WKVRG+C + NPE+F+ V G++ DSDI+ + +G Y++GH G W NKMHDN+ YGFDPHDDSD L I N V+ NG HGIIASKRCN V I N VY G E + GIFLHRSSDD V N V+D DAG+A++ES A + +NTF N KYG+R+SVG A N+ N +Y YTY G+DEP+ G +N F N+ G +KI++A+G F DN F + G RF+D + V N +V +D C G+ ++ Y
Sbjct: 71 GGCATLGQIWESRAGK---APLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLST-SETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSS--GRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGY 508 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig176.5314.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig176.5314.1 >prot_Ecto-sp13_S_contig176.5314.1 ID=prot_Ecto-sp13_S_contig176.5314.1|Name=mRNA_Ecto-sp13_S_contig176.5314.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=585bp MDSAIPATTTDVIDNTDTTTDTTGGTKSVASTATSCGGVASGYYCCNAGCback to top mRNA from alignment at Ecto-sp13_S_contig176:25406..34404- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig176.5314.1 ID=mRNA_Ecto-sp13_S_contig176.5314.1|Name=mRNA_Ecto-sp13_S_contig176.5314.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8999bp|location=Sequence derived from alignment at Ecto-sp13_S_contig176:25406..34404- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig176:25406..34404- >mRNA_Ecto-sp13_S_contig176.5314.1 ID=mRNA_Ecto-sp13_S_contig176.5314.1|Name=mRNA_Ecto-sp13_S_contig176.5314.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1755bp|location=Sequence derived from alignment at Ecto-sp13_S_contig176:25406..34404- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |