prot_Ecto-sp13_S_contig17584.5303.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig17584.5303.1
Unique Name	prot_Ecto-sp13_S_contig17584.5303.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	56

Homology

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BLAST of mRNA_Ecto-sp13_S_contig17584.5303.1 vs. uniprot
Match: D7G099_ECTSI (Phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G099_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 9.110e-29
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0

Query:    1 QVLLEEGGANNIFSGLTRAQFRDVRQTIVQAILGTDMSGHMQHCADVFQCVQKAKK 56
            QVLLEEGGANNIFSGLTRAQFRDVRQTIVQAILGTDMSGHMQHCADVFQCVQKAKK
Sbjct:  822 QVLLEEGGANNIFSGLTRAQFRDVRQTIVQAILGTDMSGHMQHCADVFQCVQKAKK 877

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BLAST of mRNA_Ecto-sp13_S_contig17584.5303.1 vs. uniprot
Match: D7G095_ECTSI (Phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G095_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 1.030e-24
Identity = 51/56 (91.07%), Postives = 52/56 (92.86%), Query Frame = 0

Query:    1 QVLLEEGGANNIFSGLTRAQFRDVRQTIVQAILGTDMSGHMQHCADVFQCVQKAKK 56
            QVLLEEGGANNIFSGLTR QFRDVRQTIVQAILGTDMSGHMQHCADVFQ   KAK+
Sbjct:  536 QVLLEEGGANNIFSGLTRIQFRDVRQTIVQAILGTDMSGHMQHCADVFQFALKAKR 591

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BLAST of mRNA_Ecto-sp13_S_contig17584.5303.1 vs. uniprot
Match: A0A6H5KY22_9PHAE (Phosphodiesterase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY22_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 2.620e-24
Identity = 50/56 (89.29%), Postives = 52/56 (92.86%), Query Frame = 0

Query:    1 QVLLEEGGANNIFSGLTRAQFRDVRQTIVQAILGTDMSGHMQHCADVFQCVQKAKK 56
            QVLLEEGGANNIFSGLTR QFRDVRQTIVQAILGTDMSGHMQHCADVFQ   KA++
Sbjct:  793 QVLLEEGGANNIFSGLTRIQFRDVRQTIVQAILGTDMSGHMQHCADVFQFALKARR 848

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BLAST of mRNA_Ecto-sp13_S_contig17584.5303.1 vs. uniprot
Match: A0A835YJJ2_9STRA (Phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJJ2_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 2.340e-10
Identity = 32/56 (57.14%), Postives = 42/56 (75.00%), Query Frame = 0

Query:    1 QVLLEE-GGANNIFSGLTRAQFRDVRQTIVQAILGTDMSGHMQHCADVFQCVQKAK 55
            ++LLEE GGANNI S L+RAQF + R+ IV+AIL TDMS H+ HCA   + + +AK
Sbjct: 1280 KILLEEAGGANNILSRLSRAQFTESRKVIVRAILSTDMSQHLDHCARAARLLSRAK 1335

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig17584.5303.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig17584.5303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D7G099_ECTSI	9.110e-29	100.00	Phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 Re...	[more]
D7G095_ECTSI	1.030e-24	91.07	Phosphodiesterase n=1 Tax=Ectocarpus siliculosus T...	[more]
A0A6H5KY22_9PHAE	2.620e-24	89.29	Phosphodiesterase n=1 Tax=Ectocarpus sp. CCAP 1310...	[more]
A0A835YJJ2_9STRA	2.340e-10	57.14	Phosphodiesterase n=1 Tax=Tribonema minus TaxID=30...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036971	3'5'-cyclic nucleotide phosphodiesterase, catalytic domain superfamily	GENE3D	1.10.1300.10		coord: 1..56 e-value: 2.0E-10 score: 42.2
IPR002073	3'5'-cyclic nucleotide phosphodiesterase, catalytic domain	PFAM	PF00233	PDEase_I	coord: 5..54 e-value: 2.5E-8 score: 34.0
IPR002073	3'5'-cyclic nucleotide phosphodiesterase, catalytic domain	PROSITE	PS51845	PDEASE_I_2	coord: 1..56 score: 18.713
None	No IPR available	SUPERFAMILY	109604	HD-domain/PDEase-like	coord: 10..53

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig17584	contig	Ecto-sp13_S_contig17584:3385..3552 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig17584.5303.1	mRNA_Ecto-sp13_S_contig17584.5303.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig17584 3385..3552 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig17584.5303.1 ID=prot_Ecto-sp13_S_contig17584.5303.1|Name=mRNA_Ecto-sp13_S_contig17584.5303.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=56bp
QVLLEEGGANNIFSGLTRAQFRDVRQTIVQAILGTDMSGHMQHCADVFQC
VQKAKK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036971	PDEase_catalytic_dom_sf
IPR002073	PDEase_catalytic_dom