prot_Ecto-sp13_S_contig1757.5292.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1757.5292.1
Unique Nameprot_Ecto-sp13_S_contig1757.5292.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length50
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1757.5292.1 vs. uniprot
Match: D7FP48_ECTSI (DEAD box helicase similar to CG7922-PA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP48_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 9.660e-19
Identity = 46/49 (93.88%), Postives = 46/49 (93.88%), Query Frame = 0 
Query:    1 MLETFTGRSGKEVVASSARELQASVPGMTAQQAAKLKRFLMSVAFRGRG 49
            MLE F GRSGKEVVASSARELQASVPGMTAQQAAKLKRFLMS AFRGRG
Sbjct: 2606 MLEAFRGRSGKEVVASSARELQASVPGMTAQQAAKLKRFLMSTAFRGRG 2654
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BLAST of mRNA_Ecto-sp13_S_contig1757.5292.1 vs. uniprot
Match: A0A6H5KRV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV1_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 9.660e-19
Identity = 46/49 (93.88%), Postives = 46/49 (93.88%), Query Frame = 0 
Query:    1 MLETFTGRSGKEVVASSARELQASVPGMTAQQAAKLKRFLMSVAFRGRG 49
            MLE F GRSGKEVVASSARELQASVPGMTAQQAAKLKRFLMS AFRGRG
Sbjct: 2385 MLEAFRGRSGKEVVASSARELQASVPGMTAQQAAKLKRFLMSAAFRGRG 2433
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1757.5292.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FP48_ECTSI9.660e-1993.88DEAD box helicase similar to CG7922-PA n=1 Tax=Ect... [more]
A0A6H5KRV1_9PHAE9.660e-1993.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1757contigEcto-sp13_S_contig1757:9761..10389 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1757.5292.1mRNA_Ecto-sp13_S_contig1757.5292.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1757 8907..10520 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1757.5292.1 ID=prot_Ecto-sp13_S_contig1757.5292.1|Name=mRNA_Ecto-sp13_S_contig1757.5292.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=50bp
MLETFTGRSGKEVVASSARELQASVPGMTAQQAAKLKRFLMSVAFRGRG*
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