prot_Ecto-sp13_S_contig1750.5258.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1750.5258.1
Unique Nameprot_Ecto-sp13_S_contig1750.5258.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length303
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1750.5258.1 vs. uniprot
Match: D8LLQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ3_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 1.150e-21
Identity = 52/97 (53.61%), Postives = 64/97 (65.98%), Query Frame = 0 
Query:    2 MHTKNVKFEVRKGTRMHFRAPGFTFERDQGDKTHIFDVNGNLSFHAHLHHSRDLGNTRPDDPHWMLHASPDANVTTLGGSSLHFSETSVIVVAGPVD 98
            ++TKN++F VRKG +M FRAP  TFER+QGD   IF+V+G L      H   DL NTR DDPH  +  SPD ++ T G S+L FSETSVIV   P D
Sbjct:  299 LYTKNLRFNVRKGEKMKFRAPALTFEREQGDTAEIFNVDGELHLRGDQHRFDDLVNTRTDDPHDTIRGSPDGDIITYGVSTLRFSETSVIVDVAPTD 395
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BLAST of mRNA_Ecto-sp13_S_contig1750.5258.1 vs. uniprot
Match: A0A6H5L8D9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D9_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 4.690e-12
Identity = 46/107 (42.99%), Postives = 56/107 (52.34%), Query Frame = 0 
Query:    2 MHTKNVKFEVRKGTRMHFRAPGFTFERDQGDKTHIFDVNGNLSFHAHLHHSRDLGNTRPDDPHWMLHASPDANVTTLGGSSLHFSETSVIVVAGPVDA--LASGSDN 106
            ++TKNV+F VRKG +MH RAP  TFER+Q                              DDPH  +H SPD ++ T G S+L FSETSVIV A P D     +GSDN
Sbjct:  318 LYTKNVRFSVRKGEKMHIRAPALTFEREQ------------------------------DDPHDTIHGSPDGDIITYGVSTLRFSETSVIVDAAPADTDTYDNGSDN 394
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BLAST of mRNA_Ecto-sp13_S_contig1750.5258.1 vs. uniprot
Match: A0A6H5L206_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L206_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 6.310e-10
Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = 0 
Query:    2 MHTKNVKFEVRKGTRMHFRAPGFTFERDQGDKTHIFDVNGNLSFHAHLHHSRDLGNTR 59
            ++T+NV+F VRKG +M FRAP  TFERDQGD   IF+VNG L      H   DL NTR
Sbjct:  307 LYTRNVRFSVRKGEKMKFRAPALTFERDQGDTAEIFNVNGELHLRGDQHRFDDLVNTR 364
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1750.5258.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LLQ3_ECTSI1.150e-2153.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L8D9_9PHAE4.690e-1242.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L206_9PHAE6.310e-1056.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 182..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1750contigEcto-sp13_S_contig1750:14051..15887 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1750.5258.1mRNA_Ecto-sp13_S_contig1750.5258.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1750 14051..15887 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1750.5258.1 ID=prot_Ecto-sp13_S_contig1750.5258.1|Name=mRNA_Ecto-sp13_S_contig1750.5258.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=303bp
MMHTKNVKFEVRKGTRMHFRAPGFTFERDQGDKTHIFDVNGNLSFHAHLH
HSRDLGNTRPDDPHWMLHASPDANVTTLGGSSLHFSETSVIVVAGPVDAL
ASGSDNADLHSSASPPFVDEKRSELQQKEPRSSTEQSSVNGARDNANSGG
HSDSGTKDNTNLSPEQHRHHHHHQDKQQRQRQQQQQRQHHQHEQQHEQQQ
QHQHQQHLQHHEDDSPSVPTASSSSTMGLDSDSNPNPLQQQQKQQQQQQQ
PHINNHIDTPNSSPQPSDVNSPSTTGGDIIVAPNQGLLPIDDIQNTRASA
LYT
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