prot_Ecto-sp13_S_contig175.5257.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig175.5257.1
Unique Nameprot_Ecto-sp13_S_contig175.5257.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length212
Homology
BLAST of mRNA_Ecto-sp13_S_contig175.5257.1 vs. uniprot
Match: D7G5X4_ECTSI (F1E22.3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5X4_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 2.020e-56
Identity = 106/130 (81.54%), Postives = 113/130 (86.92%), Query Frame = 0
Query:   82 SGGIPQQ----RPTSSYR-AWREREQARHVATEERQRCMRRVEALDRELSGRGRVQQPEAAALSAVKQDENFALENQRAAAVRVAEECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLAEKTSM 206
            SG IP      R TSS+R  WRE     HVATEERQRCMRRVEALDRELSGRG VQQPEAAALSA+KQ+ENFALE+QRAAA+RVAEECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLD+LAEK S+
Sbjct:    5 SGWIPPSSRWARTTSSFRRGWRE-----HVATEERQRCMRRVEALDRELSGRGGVQQPEAAALSALKQEENFALESQRAAALRVAEECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDVLAEKVSV 129          
BLAST of mRNA_Ecto-sp13_S_contig175.5257.1 vs. uniprot
Match: A0A6H5KR90_9PHAE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR90_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 8.190e-52
Identity = 94/101 (93.07%), Postives = 100/101 (99.01%), Query Frame = 0
Query:  104 RHVATEERQRCMRRVEALDRELSGRGRVQQPEAAALSAVKQDENFALENQRAAAVRVAEECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLAEKT 204
            +HVATEERQRCMRRVEALDRELS RGRVQQPEAAALSA+KQ+ENFALE+QRAAA+RVAEECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLA+KT
Sbjct:  211 KHVATEERQRCMRRVEALDRELSSRGRVQQPEAAALSALKQEENFALESQRAAALRVAEECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLAQKT 311          
BLAST of mRNA_Ecto-sp13_S_contig175.5257.1 vs. uniprot
Match: A0A7S2B9E8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9E8_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 2.510e-6
Identity = 27/53 (50.94%), Postives = 35/53 (66.04%), Query Frame = 0
Query:  151 ENQRAAAVRVAEECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLAEK 203
            E QRA  +    E  V +  EE KFA W++ENMRRKH+Y+PF + L+  LAEK
Sbjct:   69 EAQRADVMAKIAELQVNIRTEEDKFAAWKQENMRRKHNYIPFVMALMKALAEK 121          
BLAST of mRNA_Ecto-sp13_S_contig175.5257.1 vs. uniprot
Match: F0YGW3_AURAN (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGW3_AURAN)

HSP 1 Score: 55.5 bits (132), Expect = 1.230e-5
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 0
Query:  139 LSAVKQDENFALENQRAAA-VRVAEECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLAEK 203
            L A+ +D+  ALE+ +AAA    A E D  +A E AK A W  EN+RR H+YVPF + LL +LAE+
Sbjct:  212 LMAIVRDKRAALEDAKAAADAATAAELDAELAREHAKRADWAAENVRRHHNYVPFVIDLLKVLAEQ 277          
BLAST of mRNA_Ecto-sp13_S_contig175.5257.1 vs. uniprot
Match: F4PRH4_CAVFA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PRH4_CAVFA)

HSP 1 Score: 55.5 bits (132), Expect = 1.410e-5
Identity = 22/45 (48.89%), Postives = 33/45 (73.33%), Query Frame = 0
Query:  162 EECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLAEKTSM 206
            E  D  + +E+ KF  WR+EN+RRKH+Y+PF +KLL +LAE+  +
Sbjct:  284 ETIDQNIMMEDEKFRNWREENIRRKHNYIPFIIKLLQILAERQEL 328          
BLAST of mRNA_Ecto-sp13_S_contig175.5257.1 vs. uniprot
Match: A0A6G0WB30_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WB30_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.340e-5
Identity = 23/36 (63.89%), Postives = 30/36 (83.33%), Query Frame = 0
Query:  168 VALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLAEK 203
            +A EE K A W+KEN+RRKH+YVPF +KLL +LA+K
Sbjct:  258 IAAEEQKRANWKKENLRRKHNYVPFVIKLLQILAKK 293          
BLAST of mRNA_Ecto-sp13_S_contig175.5257.1 vs. uniprot
Match: A0A2U1KFR1_ARTAN (Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1KFR1_ARTAN)

HSP 1 Score: 53.1 bits (126), Expect = 2.630e-5
Identity = 34/87 (39.08%), Postives = 46/87 (52.87%), Query Frame = 0
Query:  123 RELSGR--GRVQQPEAAALSAVKQDENFALENQRAAAVRVA-EECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLAEKTSM 206
            +EL GR  G VQQ  A   + +    N    N+  A V    E     + +EE KF +WR EN+RRKH+Y+PF    L +LAEK  +
Sbjct:   43 KELQGRRAGLVQQVNAVQAAGMADGGNLEALNKSLAEVNAGIESATDKILIEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQL 129          
BLAST of mRNA_Ecto-sp13_S_contig175.5257.1 vs. uniprot
Match: A0A7S0P1A7_9EUKA (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P1A7_9EUKA)

HSP 1 Score: 54.3 bits (129), Expect = 3.500e-5
Identity = 45/118 (38.14%), Postives = 62/118 (52.54%), Query Frame = 0
Query:   98 REREQARHVATE-ERQRCMRRVEALDRELSGRGRV-----QQPEAAALSAVKQDEN------FALENQRAAAVRVAEECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLAEK 203
            RER     V TE ER   + +V+A   +L     +     Q PE  A+  V  DE        AL +  A A RV    +  +A+EE + AQWR+EN+RR+H+YVPF V  L +LAE+
Sbjct:  220 RERLLREQVVTEKERNMTVGKVQARSGKLPSHAELEKLAQQHPEPPAMGEVAVDERSISELLIALAHLTARANRV----NAQIAMEEQRVAQWRRENVRRRHNYVPFLVNFLKVLAER 333          
BLAST of mRNA_Ecto-sp13_S_contig175.5257.1 vs. uniprot
Match: M8A5S1_TRIUA (Ubiquitinyl hydrolase 1 n=1 Tax=Triticum urartu TaxID=4572 RepID=M8A5S1_TRIUA)

HSP 1 Score: 53.1 bits (126), Expect = 7.270e-5
Identity = 22/40 (55.00%), Postives = 30/40 (75.00%), Query Frame = 0
Query:  168 VALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLAEKTSMT 207
            +A+EE KF +W+ EN+RRKH+Y+PF   LL  LAEK  +T
Sbjct:  227 IAMEEEKFRKWKTENVRRKHNYIPFLFNLLKALAEKKQLT 266          
BLAST of mRNA_Ecto-sp13_S_contig175.5257.1 vs. uniprot
Match: A0A804PRG8_MAIZE (Ubiquitin carboxyl-terminal hydrolase n=7 Tax=Panicoideae TaxID=147369 RepID=A0A804PRG8_MAIZE)

HSP 1 Score: 53.1 bits (126), Expect = 7.410e-5
Identity = 22/39 (56.41%), Postives = 30/39 (76.92%), Query Frame = 0
Query:  168 VALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLAEKTSM 206
            V +EE KF +W+KEN+RRKH+Y+PF   LL +LAEK  +
Sbjct:  237 VIMEEEKFKKWKKENIRRKHNYIPFLFNLLKMLAEKQQL 275          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig175.5257.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7G5X4_ECTSI2.020e-5681.54F1E22.3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KR90_9PHAE8.190e-5293.07Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ecto... [more]
A0A7S2B9E8_9STRA2.510e-650.94Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0YGW3_AURAN1.230e-548.48Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aure... [more]
F4PRH4_CAVFA1.410e-548.89Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Cave... [more]
A0A6G0WB30_9STRA2.340e-563.89Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Apha... [more]
A0A2U1KFR1_ARTAN2.630e-539.08Peptidase C12, ubiquitin carboxyl-terminal hydrola... [more]
A0A7S0P1A7_9EUKA3.500e-538.14Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Calc... [more]
M8A5S1_TRIUA7.270e-555.00Ubiquitinyl hydrolase 1 n=1 Tax=Triticum urartu Ta... [more]
A0A804PRG8_MAIZE7.410e-556.41Ubiquitin carboxyl-terminal hydrolase n=7 Tax=Pani... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041507Peptidase C12, C-terminal domainPFAMPF18031UCH_Ccoord: 164..203
e-value: 1.6E-14
score: 53.5
NoneNo IPR availableGENE3D1.20.58.860coord: 116..202
e-value: 4.8E-13
score: 51.5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..211
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..47
NoneNo IPR availableTMHMMTMhelixcoord: 28..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig175contigEcto-sp13_S_contig175:22320..34094 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig175.5257.1mRNA_Ecto-sp13_S_contig175.5257.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig175 22320..34467 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig175.5257.1 ID=prot_Ecto-sp13_S_contig175.5257.1|Name=mRNA_Ecto-sp13_S_contig175.5257.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=212bp
VPACSLSLHAHLCKTLDAAAWTSWHRSTTAAAAAGIVLLAVVWVLAIKSS
SSLSHHQLAHAARPRKEVDRQTRCRFCLLLCSGGIPQQRPTSSYRAWRER
EQARHVATEERQRCMRRVEALDRELSGRGRVQQPEAAALSAVKQDENFAL
ENQRAAAVRVAEECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDLL
AEKTSMTWSSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041507UCH_C