mRNA_Ecto-sp13_S_contig175.5257.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig175.5257.1
Unique Name	mRNA_Ecto-sp13_S_contig175.5257.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig175.5257.1 vs. uniprot
Match: D7G5X4_ECTSI (F1E22.3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5X4_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 1.150e-54
Identity = 106/130 (81.54%), Postives = 113/130 (86.92%), Query Frame = 1

Query:  244 SGGIPQQ----RPTSSYR-AWREREQARHVATEERQRCMRRVEALDRELSGRGRVQQPEAAALSAVKQDENFALENQRAAAVRVAEECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLAEKTSM 618
            SG IP      R TSS+R  WRE     HVATEERQRCMRRVEALDRELSGRG VQQPEAAALSA+KQ+ENFALE+QRAAA+RVAEECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLD+LAEK S+
Sbjct:    5 SGWIPPSSRWARTTSSFRRGWRE-----HVATEERQRCMRRVEALDRELSGRGGVQQPEAAALSALKQEENFALESQRAAALRVAEECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDVLAEKVSV 129

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BLAST of mRNA_Ecto-sp13_S_contig175.5257.1 vs. uniprot
Match: A0A6H5KR90_9PHAE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR90_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 4.430e-50
Identity = 94/101 (93.07%), Postives = 100/101 (99.01%), Query Frame = 1

Query:  310 RHVATEERQRCMRRVEALDRELSGRGRVQQPEAAALSAVKQDENFALENQRAAAVRVAEECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLAEKT 612
            +HVATEERQRCMRRVEALDRELS RGRVQQPEAAALSA+KQ+ENFALE+QRAAA+RVAEECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLA+KT
Sbjct:  211 KHVATEERQRCMRRVEALDRELSSRGRVQQPEAAALSALKQEENFALESQRAAALRVAEECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLAQKT 311

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BLAST of mRNA_Ecto-sp13_S_contig175.5257.1 vs. uniprot
Match: A0A7S2B9E8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9E8_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 7.530e-6
Identity = 27/53 (50.94%), Postives = 35/53 (66.04%), Query Frame = 1

Query:  451 ENQRAAAVRVAEECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLAEK 609
            E QRA  +    E  V +  EE KFA W++ENMRRKH+Y+PF + L+  LAEK
Sbjct:   69 EAQRADVMAKIAELQVNIRTEEDKFAAWKQENMRRKHNYIPFVMALMKALAEK 121

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BLAST of mRNA_Ecto-sp13_S_contig175.5257.1 vs. uniprot
Match: F0YGW3_AURAN (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGW3_AURAN)

HSP 1 Score: 55.5 bits (132), Expect = 4.560e-5
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 1

Query:  415 LSAVKQDENFALENQRAAA-VRVAEECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLAEK 609
            L A+ +D+  ALE+ +AAA    A E D  +A E AK A W  EN+RR H+YVPF + LL +LAE+
Sbjct:  212 LMAIVRDKRAALEDAKAAADAATAAELDAELAREHAKRADWAAENVRRHHNYVPFVIDLLKVLAEQ 277

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BLAST of mRNA_Ecto-sp13_S_contig175.5257.1 vs. uniprot
Match: F4PRH4_CAVFA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PRH4_CAVFA)

HSP 1 Score: 55.5 bits (132), Expect = 5.560e-5
Identity = 22/45 (48.89%), Postives = 33/45 (73.33%), Query Frame = 1

Query:  484 EECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLAEKTSM 618
            E  D  + +E+ KF  WR+EN+RRKH+Y+PF +KLL +LAE+  +
Sbjct:  284 ETIDQNIMMEDEKFRNWREENIRRKHNYIPFIIKLLQILAERQEL 328

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BLAST of mRNA_Ecto-sp13_S_contig175.5257.1 vs. uniprot
Match: A0A2U1KFR1_ARTAN (Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1KFR1_ARTAN)

HSP 1 Score: 53.1 bits (126), Expect = 7.470e-5
Identity = 34/87 (39.08%), Postives = 46/87 (52.87%), Query Frame = 1

Query:  367 RELSGR--GRVQQPEAAALSAVKQDENFALENQRAAAVRVA-EECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLAEKTSM 618
            +EL GR  G VQQ  A   + +    N    N+  A V    E     + +EE KF +WR EN+RRKH+Y+PF    L +LAEK  +
Sbjct:   43 KELQGRRAGLVQQVNAVQAAGMADGGNLEALNKSLAEVNAGIESATDKILIEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQL 129

[Close]

BLAST of mRNA_Ecto-sp13_S_contig175.5257.1 vs. uniprot
Match: A0A6G0WB30_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WB30_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 8.540e-5
Identity = 23/36 (63.89%), Postives = 30/36 (83.33%), Query Frame = 1

Query:  502 VALEEAKFAQWRKENMRRKHDYVPFAVKLLDLLAEK 609
            +A EE K A W+KEN+RRKH+YVPF +KLL +LA+K
Sbjct:  258 IAAEEQKRANWKKENLRRKHNYVPFVIKLLQILAKK 293

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig175.5257.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig175.5257.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7


Match Name	E-value	Identity	Description
D7G5X4_ECTSI	1.150e-54	81.54	F1E22.3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
A0A6H5KR90_9PHAE	4.430e-50	93.07	Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ecto...	[more]
A0A7S2B9E8_9STRA	7.530e-6	50.94	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
F0YGW3_AURAN	4.560e-5	48.48	Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aure...	[more]
F4PRH4_CAVFA	5.560e-5	48.89	Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Cave...	[more]
A0A2U1KFR1_ARTAN	7.470e-5	39.08	Peptidase C12, ubiquitin carboxyl-terminal hydrola...	[more]
A0A6G0WB30_9STRA	8.540e-5	63.89	Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Apha...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig175	contig	Ecto-sp13_S_contig175:22320..34467 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	0
Model size	1009
Hectar predicted targeting category	other localisation
Exons	5
Cds size	636

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig175.5257.1	prot_Ecto-sp13_S_contig175.5257.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig175 22320..34094 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462911.327854-CDS-Ecto-sp13_S_contig175:22319..22630	1681462911.327854-CDS-Ecto-sp13_S_contig175:22319..22630	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig175 22320..22630 +
1681462911.339978-CDS-Ecto-sp13_S_contig175:32221..32342	1681462911.339978-CDS-Ecto-sp13_S_contig175:32221..32342	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig175 32222..32342 +
1681462911.348427-CDS-Ecto-sp13_S_contig175:32848..32952	1681462911.348427-CDS-Ecto-sp13_S_contig175:32848..32952	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig175 32849..32952 +
1681462911.3569365-CDS-Ecto-sp13_S_contig175:33194..33267	1681462911.3569365-CDS-Ecto-sp13_S_contig175:33194..33267	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig175 33195..33267 +
1681462911.3652585-CDS-Ecto-sp13_S_contig175:34067..34094	1681462911.3652585-CDS-Ecto-sp13_S_contig175:34067..34094	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig175 34068..34094 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462911.3734276-UTR-Ecto-sp13_S_contig175:34094..34467	1681462911.3734276-UTR-Ecto-sp13_S_contig175:34094..34467	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig175 34095..34467 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig175:22320..34467+
coding sequence from alignment at Ecto-sp13_S_contig175:22320..34467+

protein sequence of mRNA_Ecto-sp13_S_contig175.5257.1

>prot_Ecto-sp13_S_contig175.5257.1 ID=prot_Ecto-sp13_S_contig175.5257.1|Name=mRNA_Ecto-sp13_S_contig175.5257.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=212bp
VPACSLSLHAHLCKTLDAAAWTSWHRSTTAAAAAGIVLLAVVWVLAIKSS
SSLSHHQLAHAARPRKEVDRQTRCRFCLLLCSGGIPQQRPTSSYRAWRER
EQARHVATEERQRCMRRVEALDRELSGRGRVQQPEAAALSAVKQDENFAL
ENQRAAAVRVAEECDVTVALEEAKFAQWRKENMRRKHDYVPFAVKLLDLL
AEKTSMTWSSR*

mRNA from alignment at Ecto-sp13_S_contig175:22320..34467+

Legend: polypeptideCDSUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig175.5257.1 ID=mRNA_Ecto-sp13_S_contig175.5257.1|Name=mRNA_Ecto-sp13_S_contig175.5257.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=12148bp|location=Sequence derived from alignment at Ecto-sp13_S_contig175:22320..34467+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTACCTGCCTGCTCTCTCTCCCTCCACGCTCATCTCTGCAAGACATTGGA
CGCTGCTGCGTGGACTTCATGGCACCGCAGCACAACAGCAGCAGCGGCAG
CCGGTATCGTGCTTTTAGCAGTGGTGTGGGTGCTGGCGATCAAATCCTCT
TCTTCTCTCAGTCATCATCAATTAGCCCACGCAGCGCGTCCCAGAAAAGA
AGTAGATCGCCAGACCCGCTGCCGCTTCTGTTTGTTGTTGTGCTCCGGGG
GAATCCCACAGCAGCGACCAACATCATCTTACAGGGCGTGGAGGGAGAGA
GAGCAGGCAAGGTACGTAAAGCAGTACGTACATGCATACATACATACGAT
ACAACACTGCTGCTGTTGCGAGTTGAGGTCTGTCTGCAGTCAATCGAACT
TGTGGGACTGCACTACATGTGTACTACTCTGCACGTTCGGTTGGGTTGCC
AGCCCGGGTTCGAGTTATGAAAGAAGAAGCAGGGGATACGACAAACAAAC
GTTCATATAGATTGCCGTACAGGACGTCTACTGCTGCTGTGCTGCTGTGG
CTTGTTGATGGAAAGGAGCTCGCGAAATCGATTCACTAAAACGTAAGTGT
ATGTATGTTCCGACGCCCTTCATCCGCCCCGCGACCGATCGTACGGTGGA
GACGTTTGGCGCGTTGTGTCTAACCTCAAGAGGTACGTATTGTAGTACAG
AACATTCCAGAGAGAGAGGTGAAAATGTTCGGCGGGTTTGGTCTAATTTC
AAGATGTAGCTCCAGACATTTCGGGTGACTGAACGAACACCGAAAATGTG
TTTGGGGTTCAGTCTAATTTCAAGATGTAGCTCCCGACATTTCAGGTTTG
CTCATGTCTCCGAACCGGCGTGTTGTTTTACTTTGAAAGTATGGCCCTCT
TGCGTGTGAAAGCCCGCATCTTGACTACTACTTTCAAAGACACACCAACC
AACGGCACGCCCACACGCCACACGACACCCCTCGGAACGACGACTAACTG
CCTGTCAAGCACCTTATCGCTAATTTTTCATGCATACGGAAGGCCACAAA
TAAGTATCGAAGAGAGGCCCGTCGTCAGCACCACACACCACCCCGCGTCC
GCCCAGAGCACTCTCTGTAGATCGCCAGCGTGTGTGCTACTACTATGTTT
GTTTGTAATTGTTGTTGTTCTATCTATTTGTAAAAAGAAGTAGTATGTAT
CCTCGTACTACTTTTTTTTACAAATAGATAAAACAACTGCAAACAAACAC
AGACTTCCCGTTCGAGACATCACCAAGTCGAAGGGGGTGTTTTGAAGTTT
TTCCAGGGAGTGGGCAGAAAACCGGCTGGATGTACGTGATCAGATCTTCA
ACATCAAACCCTAGCCCGACTCTTTCCAGGGAGTGGGCAGAAAACCGGCT
GGATGTACGTGATCAGACCTTCAACAACATCCAAACCCTAGCCCGCGCAT
GCTTCCTCCCGTTCTTTCTTCCCACGAGTGGATATCTTGCAACTGCCAAC
GCGTTTACTCATATTCGGTAAACAACGTCAGTCACCAGACCTCCACCAGA
CCAGTGCAATATGTATGTATTCATTATCACCAGCAACATAATCATGGTAG
TTGTTGTAGCACCGAGGACAGCGGTTGAAAAAATGTGCAGCGATGAAAGG
CGGGTGACCCGATGGCTAATTGGAGTTGGCGTCTCTGAGTCTTGCCGGCC
TTCCGGCTACCTTGCATACGAGGCGTGGAAACAGTTTTCTTCGGGGGTCT
GACCTGTGCCTACGTTGGCCTTGGAAGAAATGTTTCGGTGTTTTTTGCTT
GAGCAAACCGCTTTTTGTTTTCTCGAGATTTTTTCTCAACGATGAGAATC
GTCTGTTAATAGGTCAATGTGCTTCAGGGAGGAGGTTTGGCGAGGCATTG
ATGAATGGCGGCGTAGGTTGATAGAAGAAGAAGGTGAATGCAACTCCATG
TGGCGGTGAGAGCTAGCTGTGAGTTTTGATTTGGGGGGGATGAACTGTTA
GGCGTTTGTGCATGCGGCAGTACAGCCGTAGGGGTAGAGCAGTATGCAGT
ACGACGTATGCTGCGAAGGGCCAGCAGTTCGAGCACGACTGATTTTTGCA
TGGCACGGTAGATTTTGATATATTTGGAGTGTGCAGATTTTGGCTTTCGA
TGTCGTTTTGTGGAAATCGGAGTTGCTCGTGGTGTAGGCACATCAGCTGA
GGCATATAGTTCTTCACATGATGAACAGCCCCGAGAAGGAGTACTGATGC
AGATGCATACCTACGTCGCGTAGTAAGTTGTTGATGCCGCTGTGTGTGGT
GTCCGTGTCATGAACCACAGCCATTCGCAAACAAACGGGACGTTTTGTTG
AAGCTGATGCTGTGGTATACATACATACACACGCGTATAAAATACATGTC
ATGGCTCGCAGCCATTCGGAAAAAATCGGAGATCGAAGGATCGACTTTCA
GCCATTGAACTATGTACAGTAGATAGATGTGAAAATGCACCATATTTACA
TGTCCTACTACATACAGCCCATAGACACACACAGCAGTGTAAGACGGCTA
CAGCAGCAGTGGAAGACGGCTGCTGTGATGCTGTGTGATATGTAAGGGAA
TCGTACCTGTTAAATCGTGTTTGTACGCGGACTGTTCTGGCTGGCAGCCA
TTCCGAGAAAACGAATTATGGAAAGTATTCGAAAAAGGATGGCGTCATCA
ATCAACCATCATCCAATCGCAAACCGGAGGTGAAAGGTCAAATCAGAGTG
GCTGCCACATTGTTTAGTCAGCCCCTACAAGAGGGAGGACTGATGATGCA
GACATACGTCACGAAGTATGTGCGATGGAAACGTTGTACTGCTCTCTGTC
TGTGTGTTAACCGTGAGAAGCGTACTGCTGGCCCGCATCAAGTTCGGAGA
AAAGCGGACTTTGTCAAGAAAAAGGTCCGACACAAAGGTATCGAATTCGT
TCTGCAGGCTTTGTCGTCGCGGCACGCGTCCCCTGGGTATTTAGCCAGTT
TTCGACACTTTGAGCGTCAATCACACGCGCCAAGGTGGCCTGCCGAGCTC
CGGGCACGAGCTTAAGTGCACCGACGAGCCTCCTGCGTGCCCCTGAGAAT
AAATCGCGAGAAAAGACTTGTTGCCGCGACAGAAAGAAATGCCGAGGTAT
GAGAAGTGACCAAATGTTTTATGTACATACGACATCCCTCCGGAGTGGGG
TAAAGAGAGCACCGCGGCAAGGGGTGATCCAAGAACATGCAAAAAGCTAA
ACACCAGAGAAACAACAGCAGCAAGTATGCACACTTCGTAATTTTGCTGT
AGGTAAATTACAGGTCGGCGCGAGCTTTTTTTTCAACGATTTTCCAGATG
TGTTTTGGTTGAAAGCCTGCAGCCGCGCCGATCGATGTGCAAATACGTGC
ATGTGCGCCGACCTTCCGACCTCGGGCTCGGCAGTCTGCACGGAGAGGTG
CTGCTCTGTGTCTCTGCTGACACCGCCACGACATACATTGCTCGCCTGCT
GCTGGAGACTACATACATGGGGCTGCTCTCTGCTGCTGCTCCTGTACGTA
CGTATGTTGTTCTTTCAGCAGTCGGACATGGCCAGCAGCGAACGACGAAT
GATTTGATTGTGCGGCGTTTTTTCTAGATTTTTCTTGGTTGAAGCCCCGC
ATGCCGTAGCATGTGTATGTCATATGTATGTATGTATGTGTTTGCATCCC
TCCTCCGGAGTGGGGAAAAGAGAGCACCGCGGCAAGGGGTTGCAAGCACA
CGCAAAAAACAAACATAAGGAAAACAGAACCACACGAATATCCTGCTCTA
CCACAGCTGTGCACCACCAAGAATAGGCTCGCGCAATTTTTGGGAGGTCG
GCGCGAGCTTTCTCATCGATACTGCCTGCTGTCAAAGATGTGTGCACTGC
TCAGCATCTCTGCTGACCCTGCAACGACATATACATTACTGGACTGCTGC
TTGGAACTACATACTTGGGGCTGACTCTTGTGTGTAGTTCATCCAGCAGT
TGGACTCAATTCATAGCCTCATGGCCATCATCAGCAGAAGGACGAAATGG
TTGAGCGGCGTCATCAAGCCGTTTTTTTCTGATTTCTCCACGCACACACA
CGCCCACCTACCCTCGAAAGGGCAATGGAGAACAAACTATCTATACATGT
GCGTTTCCAGAGTGTAAACAGTATCAGGTAGTGACCGTAGCATCGTGATG
TCTCAAGCATCCGGTGGGGATGAGGCGAGATGAGACAGACCGCAGTCCAG
AACGTTTCCCCCGTATAAACAGAAAAAAAAGAAAACGAGCTGAAATTGCT
TGGGTTGGTACCGCCTTTCTGAATGTAATGTACTCTGGTAACGCTACTGC
TACTGTATTCTCTTTTCCCAAAAGTACACGCTCGCTCCACAGCCGCTCTC
AGATGTGACAGCTGCCGCGCCAGCGCGCCGCTGATGTTGTGTTGACACAG
GGTTCAACATCATATCAGAAACAGCTTGACACCATGCACGTTTTTGGTTG
AAGCTGACGTCTTGTGCCGGACTGTTCGACACGACAGCCCGACTCTACCC
GACAGCTGACGCGACAGATGGACAGAATCAGTGCGTGGTCTTCTTCCAGC
CACAGGAAACATGTGGAGACTGCGAGGAAGATTTTACAAATCTGTGTATA
CAATTGTAGTCTAAATATATAGCAGAACTCGGTAACAAAATATGCCATGG
TGGCAACACACAGACAACGGCCACGTGGCGTTTCTTCATCTCGGCAGGCA
GCGATCTCACCATGACGCTCGTTCTTCTGAAGACACCACTATTTTGTCGA
TGCTTGCACTGTTGTACACCTCTATCTATACTCGGGTGCGAGGGTATATT
ATCTAATGTGCGATCTGTGCCCTCCTGCTGCTTAGTCTAGTCACCCATCA
CGTCCTTTGAGCTGCCTCAAGAAGCATAACGGACGAGTTCAGAGCGGAGC
AGCCGCTGGGGAAGAGTTTAATGTTGATTAAGCTGCTAGCTGACGCTGAA
CGCTACCACCCCTCTCTGTAAATCACATTGACGTCCCCCACACCCTAACA
CTGCTGTTTGTAACCACACCTTTACACTTGTGGTATACGAGCCAATGCCT
GCTCGAGCCAATGCAGGCATGTGAAAACTAGTGCGCCTCCCGATCTCGGA
AAAATGGCTGGCATCAATTCAAAAGGAAAGTGGTCACAAGTAGAGAACAG
GCTGCAGCTTCCAAAAAAAAGCTCCGCGCCGTTGTATGCTGCTCGGCTCG
ATCTTTTTAATCGACGAAGGTCCTTCGAACGCAACTTGAGTGGTTAGATC
AGCAGTCGGAATCATGGCCAGCAGAGAGACTCCAAATTAGAGCGGTGTAC
ATTCGTGTGTTGTCAAGCAAACGCACAAGCCCTCACAAGGGCAGCGAAGA
GCTGCATTTGTGTGCTTCCATCGTACGAACAGCATGAGGTAGTCACGGTA
ACGTCACAACGTCCCCCAATTGCAAGTTGGGATTTCAGCCAGCCCAATCC
CGAATAAAAGAGAAATCTTGCTCGAAAATGCGAGACTTGTATCAAGTGTA
AAATGCGATCGGATCGAAACATGAATCACGTGAAGAATGTGATCGGAATC
AATATATTGATAAAGTGAAAAATGTCCAAAATTTCGATTCATTAATCAAG
TGAAAAATGTCGCAGATTTTCAACTGCTTCGTCAATTCATTCGTGTGACC
GAAATCAACTCTTAGATCGAGTGATTCGTGTCATCGGATTCCAAATGTTA
GTTGATCGAACTCAAGGTGGGCATGCTTGTTAGTCTAGCTGTTCAAAACT
CACTGCGTTGGGATGTGCCAATCCACCAAATCTCGCGTTTTCGAGGATTA
TTTTCGTTAAAAACATTTCACACCACACGCAAACGCAGCTTTCGAGTGCT
GAATCCAAGCATTGTAAAAATTGCACCTAATTTTCCTACAGCTCATTAGC
TACCCGAAATTTTTCTAGTTGTTTCAATCCGAGCCACTAGCACAAAGTTA
CGATTTTTGAAGAACACTTTGGAAAACCCGCTAAAAGAACTCGTCGGGTG
ATTTTTCCGCAAAAAATAAAATACGGCGTTACGCTTGAGTACGGATGAGT
TTTTTTAAGTACTGGCTCGAAAGCTTTAGTCGAAGTTGAGCATTTTGAAA
TACTTACTCAACCTCCTGAGTTCCCATTAGTTTTTTTAAATACTTGTTCC
ATAATCCGAGTACGGGTGAGTAAATTCAGAATTCTTGCTCAATGGCTTTA
GTACATGTCGAGTATTTTTGAACACTTCCTCAAGGAAGCACTCAAGGATG
AGTAAAATACTCGAGTGTCTGAGTACGCATGAGAAGGTTTGAAGTACGTA
CTCAACCTCTTGAGCATGGTTGAGTATGCCTCCCGGAAAAATACTCACAT
CCGGTGGAACCTGCCGAGACTAAGAGATTACTAATGATGACGTCAGTCGT
GCAGGACAATTTCTACGGCCCTTGCATGCACCACCGCCACACAACACACT
GCTGCTGCGGCACAGAATCACTCGCACTTAAAGCGATACTAAATTCTCGG
ATACTTGTACCCATCGCGTGGGGGTAGCGTCAAGGCTCATGAGTGACGCA
GCTGCTACAAATGCAGCGGCACCCGCCAATGCAGCAGCGGCGGCACCCGC
CAATGCAGCACCCTTGGAGGCAGCGGAAGCACTAGCAACAGATGCTGAGG
TGATCCAGACCCCACGGCCAGGAGGGACCTCCACGATTGTGCGCGTCAGC
GAACCGGCTGTTGCTTACAGCACGGTGAACTCCGAAGTGTACTCTGTGAC
GGCGGAAACGGTGTCCGCCGTCAAGAACTTCAAAACACCAGACGGTTACC
AGCAAGAAGGGGAACACGAGGAATCCTTTCTCTTCTCTCTGGGAAACTAC
TGCAAGCCCCATGTCATAGTTGGGCGTGTTTTCTTGCGCTACCCAAGTAC
GAGATCTCCGTATGCTACGTGTATTGTACCCGCGGTGGTCGAGTATTCTT
GAGTAAACCGAGTGAGTATACTTGGGTAACTTGAGCATTACTGAACATGC
CTCGGAGGACTCCGGTAGGCCGGGCATAGTTGAGTAAGCGTGAGTACGAT
ATGACGTACTTTCTCAAATGCCTGAGTACGCATGAGTAGTTTTGAAATGC
TCACTATTGGTATTAGTCGAAGTTAGATATTTTTGAAGTACTTTCTCAAA
GATACTTGAAGGTTGTGTAAAATACTCGAGTTGCTGAGTACGCGGGAGTA
TTTGAAGTACTTACTCAAACTGTTGAGTACACATAAGTGTTATTGGTATA
CTTACTCAAGAAGAGCTATCCTCGGGGTTGAGTACAATACTCAAAAGTAC
TTGAGCATGAGTATAATTTACTAAACATTCCCTTGATATCTTTGCTTCAT
GTGACTTGCGGGAGTCAATACCAGGAATCTTTCGCCAAAAAAAATACTTC
CGAGAACAGCACACCGCATGCAGCGCGTGTGCCATCCTCCTAATCGTAAA
TTCTCCGCACAGGGCAGCCGTAGAGGCTGCGTAATTTATACTTACAATTT
ACCACCACACGCCTCCTTCCAAATCAAGGCTTTGAAGCCCGATAGGGTTT
CAGAGTCTATCAGCGAAAATCTAAGACCTACATTCGATGTTGACCCCTGG
TTATGTTCCCCAGGTTTCCAGGTTCTGTGCCCCAATTTTTTCGCCCAAGT
CGCGCCGCATCTTGGTTTTTTTTACTTAGGGTTAGAGTTGGCGATATCCG
GCTGCTTCTCTGAAAGAAAGTTGTTTTTTTTTGTCGAGGTTCTCGAGATT
GCAACAACAGATGTTGGAGTGAGTTCGAAGACGTTCCTCCCGCCCCCACC
TGGTCTTCCTGCGAGTTTGATGGAAAACCTTGTCTCAGTCTCTGGGAAAC
GTCTCTCTTTTCTATGACTTCGTGATGTCCTCGGTCCCACACCATGCTAG
ACATGGCATGTCTGTCTCGCCGGCCTTCCACAAGCATACAAATGGCGAGG
CAGCAGTCGTCCCTGCATCTAGTTTGTACAGCGTCGACCGTGCTTTAGCG
AACCTGTGTGTGGCACACCTGTTTTTTGGCGTGTCTCCCAACTATATACA
CTCTGAAGTAACTTTTCCTACAAGCACAACGCAACTTTTTTTTTTGCCTC
TCTCCGTCGATAAAATTGTTCCATAATCACTGTCTACTCCAAACCCATGC
TCAATGGCGCACAGCAACCCCTCTCTACTTACCGCTGTCTTTGGTGCATG
CACTATGTAGACTGAGGGTGACCTTCCTTGCATTTGTGATTTCCAACAGG
GCGACCCCATAACAGAGTCGTATACTACAGAACCGTAAGGATGCGAAAAA
ACACACGGGGATGCGATCAATTTTTGAATGATTTAGCTCTTAAATTTTTT
ATCTCACCCCCGTGCGGTATCACCGGTCCCCGTGTGATTTTCGAATCAAA
TGATTTGGTTCTTGGTTATTCGTCGCACGGGGTGCGATATCACCGGTACG
TGCGATACTAAGTAAACAACAAACCCCACAGCAGCAGCACCGTAGTCGCG
TGGGTGCGTTCGACTCATCCCCCCGTGCGACATCTCCAATACGTGCGATA
CCCAACATGTCACGGCCGTTCTGCATAACATACACACGGTCGGTGCCAAC
GCACAACGAACACAGAGAGACCACACATTTCTGCGTGTCATACTTATCAT
AGCGAGACACGGCGGGATTAAAGCGGCGAAATACCACAGTAATTTGCCTC
CACCGAGAGGTCGCTTGCACAAACGCACCGTGCCACACTCCATCGCAGCA
TGTCAGCGGGTGCAGGCACGGAAGCTGCCACAGCCGCACAGGCGCTGCTG
AATGAATAACTCACGTGACAAATGAGTCTCGTCTGACTCCTTGTCTTTGT
CACTGTGTTTCAATATGTGGTACGCGATGCCGCCATACGTACAGAACAAC
ACCGTTCACGATACCGCGAAGTACCTCCGGCGCAGCGAGTGTCCCAGAGC
CACTCGGGGCCCGGTATTGATGTATATCCGGTCGCCGCGGTGGACTAGTT
GGTAGCCTCGAAGCCTTCTTAAGGTCAGGTCAGGGGTACGAATCCCAGCG
TAGGCGAGCTTTTCTTGCAAAGTGAGTTTTTCTCTCGCTTCCGCTCCTGG
CCAAGTGGATAGCGCTAGTTCGTGTGTACAAGTACAGCAGGAGGGGAGGG
TACAGAGGGGTTTTTCTGTGTGACCACGGGTTGGAGTAGTCGGCACTAGT
GCTGTGAACGCTGATTTGAAGAAAAGAACAAAAAAAAAAAATGTTGATGT
CGCACCCCCGTGCGATTTCACCGAACTCTGTGCGATAATCGAATTAAATC
TCTTGGTTCTTCGCTTTTTATCGCACGGGGGTGCGACATCACCGGTACGT
GCGAGATCACCGAACCGTGCATTCCCTCGCATCCTACGGTAGTCCTTCTG
CGGTTGCTGTTGTTGTGGGCGTGAAAAACCAGTCAGCGTTAACGGATCGA
TCCAACAAAAGGCACCTTTTTGGCACGTTTTTGGCACCTTTTTGCGGTCC
TCACCACCAGACAAGACGATATACGCTATCCAACGCACAACAAGAGAGGT
TAGCACGCTGGCGTAGTGTCACTGTACATCCGCTGTCATTTATGTGGAAG
AACAGGACTCCGCGCAAAGAGAAAAGAAGCCTCGCTCCCTTTTTTTGTCC
ATTGGGATTTACGGGACAAGAAGCGCGGATGGATCTCAATTTAGCACCGC
CTCTGTCTGTATATATACAAGCTTCTCCAATCATAGGTCAACTCTATGCC
TATGCATACAGTAGTACATACAGCAGCAGTACCACCGTCTTTTCTTTGAC
AGAGGGTTGATTTCGTTGCGTTTGACGTGTTGTACACTGTGTGGGGATTC
AGGCATGTGGCAACGGAAGAAAGACAGCGTTGCATGCGGCGTGTGGAAGC
TTTGGACCGAGAATTGTCGGGTAGAGGCCGGGTGCAACAGCCCGAGGCCG
CCGCGCTCTCTGCGGTGAAGCAGGTAAGACCTTCACAACGTTGACGGATG
CAGAATTGATGGGATCGAGGAAAGTAGTGCTTATTTCGTACAGTTGGGAA
TGCCGATTCCTCCCATTTATTCTGGACGTCGGCCTTATACACCTTTCGGC
ACAATTTCGGACGTACTGGCCTGGGCCACACATCAGGAAGGCCGCCTAGG
AGTGCTTTTGGCCCTTTTCGCGGTGTTAACCTTCGGTTTTATCGCGGATA
GGATTCAGCTTTGCCGACCGTGAAGTCGAATTTTGCGTACACACGATGTT
ATAGCTTTCCACATTGTTTGGGCATACACCATTGAGATAAAACCTCCAGT
GCGTGTGAGTTGACCGCATTTCGAACCTACGTCGTAAACCTTAGAAGGTC
GCGTGGTCATCTATTGAATCATTCAGCGAATGTTGTGTGACCCATCACCT
CAAAGCCTCCTCACACGCCGTCAGCGACCTTCCCTTGTTGCGCATATAGT
CACGCCGTGCTACCTTGTTGTCGCTGTAGGACGAAAACTTCGCGCTGGAG
AATCAGCGGGCGGCAGCAGTGCGCGTCGCCGAGGAGTGCGATGTGACCGT
CGCTCTCGAGGAAGCTAAGTTTGCTCAATGGAGGTGAACGAGGAAATAGG
GGACATTTGACAGTCTAAAGAAGGAGTCACTTTCGGCCTAGACGAGGTGA
CTGTCCGCTAGTCTAAATAGGTTCTAGATTCGTACGAAGACAGCGCTTGC
AAGTCCTTTTTCGGTTACCAGGGAACATTGTTATGCGTGCTGATGCCAAT
GTCGCGTGTGTTGTATATAACGATGTAACACAAAACCAAACTCCATTCTT
TCCTTGGGTTGTTCATGCGTTGTAGGAAGGAAAACATGCGCCGCAAGCAT
GACTATGTTCCGTTCGCTGTGAAGCTCCTGGACCTCCTGGCTGAAAAGGT
AAGCGTCAAGGAAATAACTAACAAGGCGAAGGCAAGATGAAAAGAAGTAG
GCACCAGGGCTACCGCGTGTTGTGCGAGATATCGTGGGGTAGGAGTTGCC
TACTTGTTTCCCGTAACATCACCCGTGCAATCATCACCTCCTGAAACCCG
ACGCGTACCTTATGCCCGGCGCGTCTTGGGACTGTCATCAAACAGGTTTG
GATGCGTGCTCTGCATGTCATTTATGCTACGCTATGTTACGAATGAGAGC
GTGCGATCGAAAAAAACACCGCAGTCAGTCATGCATGCGGTTCAAATTCA
GGTCCGCATGTTTACCTTTTCATTATCTGTATGAGACGCTGGCGCTCTTG
TGGCACGCGGCCAACATTCATTCGAGCCAATGCTGCATCCTCTGAAACTA
GCGTTAAGGCGAAGTTTCAGAGCCGGGTGTACTCCTTTCCGTGACAACCC
GTATGCTCTTCGCCGTGTTCTGCGGTTACCGCGTGTCCTCTAAACGTACG
AACCTAGGGTTTTATCCACGTGCCTCGAAAAGTACGTCAGAAAGCCGATC
AGATACACATCCGGAGTCAACTATCGCGTCTTTGCGCCCGTTTGCTATTT
GTGCTGTTAGCATCGCACACCGAAATGAGAGGATATGTGACGCAGTTTGG
AAGCATGTCCTAAAAACGCGGTAAAGCACCCTGTGCGCGGCCCCTTGCAC
CCCGTCGCGTTGCTACAAATGGGAGACGTTCTTCAACATGTGTCGAAGTG
ACACAACCAAGTTCGCCCATTCCATACCGTTGATGTGCATCCAGACAGAC
TTCAATGACGTGGTCGAGTCGATGAAATCCAAGGCGAAACACCGAGAAGA
CGCTAGGACTAGCGCTGGGGAAGGATCGGAGGGTTTTGAATAAAAACCGT
CTCTTCGCCAGCGGCGACCCCTTCACGCATCGGCAACTTCCATTCTTGGA
ACGGAGCGACCCCGAGGGGAGTACCGTAAACTACACAAGATAACACACCC
CCGGTGATACATTTTTGGCTTTAAAAATATTATCACCGGGGGTGGTATCC
TGTGGGGGGTGTGGTATCTTGTGTAGCCCGGGTGATAAAGTGCAGCTCGC
AGGGGTCCATAAGGGGGTGTGATAAACCAGGGGGTGTGATAGCACGTCCG
AACACCCACAGGGTGTGTTTGGGGGTGTGATATTGAGGGGGGTGATAA

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig175:22320..34467+

>mRNA_Ecto-sp13_S_contig175.5257.1 ID=mRNA_Ecto-sp13_S_contig175.5257.1|Name=mRNA_Ecto-sp13_S_contig175.5257.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=636bp|location=Sequence derived from alignment at Ecto-sp13_S_contig175:22320..34467+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTACCTGCCTGCTCTCTCTCCCTCCACGCTCATCTCTGCAAGACATTGGA
CGCTGCTGCGTGGACTTCATGGCACCGCAGCACAACAGCAGCAGCGGCAG
CCGGTATCGTGCTTTTAGCAGTGGTGTGGGTGCTGGCGATCAAATCCTCT
TCTTCTCTCAGTCATCATCAATTAGCCCACGCAGCGCGTCCCAGAAAAGA
AGTAGATCGCCAGACCCGCTGCCGCTTCTGTTTGTTGTTGTGCTCCGGGG
GAATCCCACAGCAGCGACCAACATCATCTTACAGGGCGTGGAGGGAGAGA
GAGCAGGCAAGGCATGTGGCAACGGAAGAAAGACAGCGTTGCATGCGGCG
TGTGGAAGCTTTGGACCGAGAATTGTCGGGTAGAGGCCGGGTGCAACAGC
CCGAGGCCGCCGCGCTCTCTGCGGTGAAGCAGGACGAAAACTTCGCGCTG
GAGAATCAGCGGGCGGCAGCAGTGCGCGTCGCCGAGGAGTGCGATGTGAC
CGTCGCTCTCGAGGAAGCTAAGTTTGCTCAATGGAGGAAGGAAAACATGC
GCCGCAAGCATGACTATGTTCCGTTCGCTGTGAAGCTCCTGGACCTCCTG
GCTGAAAAGACTTCAATGACGTGGTCGAGTCGATGA