prot_Ecto-sp13_S_contig1745.5230.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1745.5230.1
Unique Nameprot_Ecto-sp13_S_contig1745.5230.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length374
Homology
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Match: A0A6H5KRV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV7_9PHAE)

HSP 1 Score: 607 bits (1564), Expect = 7.920e-213
Identity = 355/373 (95.17%), Postives = 362/373 (97.05%), Query Frame = 0
Query:    1 MVFFRDLTEKEAEAAMDEFGQSDITSIRNKSAFLMSILRXXXXXXXXXXXXXXXXXXXXXXXPGGRPAAXXXXXXXXXXXXXXXGMXXXXXXXXXMYGAHPFTGAPHLSPYGYMDPSMAGTAPFADFYGGMYGHAPPMPLFNAYGQPMATFIPPHMPMYQAGTTEMLPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQALEEFMSTERKNIRKVSAYLMGVIRKHADNYREFVAVGTSGGPPAGLPSPYEAGLKRIREYNDFWAKQQQPRPQGGSALMERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGAPPPPGLAQR 373
            MVFFRDLTEKEAEAAMDEFGQSDITSIRNKSAFLMSILRXXXXXXXXXXXXXXXXXXXXXXXPGGRPAAXXXXXXXXXXXXX    XXXXXXXXXMYGAHPF G P++SPYGYMDPSM G+ PFA+FYGGMYGHAP MPLFNAYGQPMATFIPPH+PMYQAGTTEMLPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQA+EEFMSTERKNIRKVSAYLMGVIRKHADNYR+FVAVGTSGGPPAGLPSPYEAGLKR REYNDFWAKQQQPRPQG SALMERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGAPPPPGLAQR
Sbjct:  272 MVFFRDLTEKEAEAAMDEFGQSDITSIRNKSAFLMSILRXXXXXXXXXXXXXXXXXXXXXXXPGGRPAAXXXXXXXXXXXXXGMXXXXXXXXXXXMYGAHPFAGVPYMSPYGYMDPSMTGSVPFAEFYGGMYGHAPSMPLFNAYGQPMATFIPPHIPMYQAGTTEMLPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQAIEEFMSTERKNIRKVSAYLMGVIRKHADNYRDFVAVGTSGGPPAGLPSPYEAGLKRYREYNDFWAKQQQPRPQGCSALMERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGAPPPPGLAQR 644          
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Match: D8LG90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG90_ECTSI)

HSP 1 Score: 533 bits (1372), Expect = 2.440e-187
Identity = 284/373 (76.14%), Postives = 286/373 (76.68%), Query Frame = 0
Query:    1 MVFFRDLTEKEAEAAMDEFGQSDITSIRNKSAFLMSILRXXXXXXXXXXXXXXXXXXXXXXXPGGRPAAXXXXXXXXXXXXXXXGMXXXXXXXXXMYGAHPFTGAPHLSPYGYMDPSMAGTAPFADFYGGMYGHAPPMPLFNAYGQPMATFIPPHMPMYQAGTTEMLPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQALEEFMSTERKNIRKVSAYLMGVIRKHADNYREFVAVGTSGGPPAGLPSPYEAGLKRIREYNDFWAKQQQPRPQGGSALMERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGAPPPPGLAQR 373
            MVFFRDLTEKEAEAAMDEFGQSDITSIRNKSAFLMSILR                                                                                      DFYGGMYGHAPPMPLFNAYGQPMATFIPPHMPMYQAGTTEMLPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQA+EEFMSTERKNIRKVSAYLMGVIRKHADNYR FVAVGTSGGPPAGLPSPYEAGLKRIREYNDFWAKQQQPRPQGGSAL+ERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGAPPPPGLAQR
Sbjct:  111 MVFFRDLTEKEAEAAMDEFGQSDITSIRNKSAFLMSILRRHHQ----------------------------------------------------------------------------------DFYGGMYGHAPPMPLFNAYGQPMATFIPPHMPMYQAGTTEMLPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQAIEEFMSTERKNIRKVSAYLMGVIRKHADNYRGFVAVGTSGGPPAGLPSPYEAGLKRIREYNDFWAKQQQPRPQGGSALLERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGAPPPPGLAQR 401          
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Match: A0A1X6PIJ9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIJ9_PORUM)

HSP 1 Score: 89.4 bits (220), Expect = 1.210e-15
Identity = 68/252 (26.98%), Postives = 104/252 (41.27%), Query Frame = 0
Query:  167 LPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQALEEFMSTERKNIRKVSAYLMGVIRKHADNYREFVAVGTSGGPPAGLPS----------PYEA--GLKRIREYN-----DFWAKQQQPR-------------------------------------PQGGSALMERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGA 364
            LP  +   L ++ ATG CH  + DDR    L E+P H A++AL EF +     +R  SA+ MG+ RKH        ++G  G P  G+P+          PY A  G  +   +      D+    QQP                                        GG A      G  ++V A +  L+   +    D+D R   A   L E+  + A++E A+ + +R+RN SAY+MGL ++Y S +
Sbjct:  372 LPGPVGEGLQRVFATGVCHPSQFDDRAMDILVELPTHAAVRALSEFAAVPPSRVRNPSAFWMGLARKHKSAIAA-ASLGGQGTPQGGMPNMGYGPPPMAQPYGAPQGYGQPMHHQPPPSYDYHQVHQQPAYGGYEYGGQYGHGGYGPPPMVSGXXXXYDSRXXPVSAGMGGVAPAYGAQGGGSRVAARVDALVAARVVRPGDVDARAIEALGRLREQDALAALDELAAAEPSRVRNPSAYVMGLARKYASAS 622          
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Match: A0A7S1EQC1_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQC1_9RHOD)

HSP 1 Score: 86.7 bits (213), Expect = 8.640e-15
Identity = 64/215 (29.77%), Postives = 102/215 (47.44%), Query Frame = 0
Query:  167 LPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQALEEFMSTERKNIRKVSAYLMGVIRKHADNYREFVAVGTSGGPPAGLPSPYEAGLKRIREYNDFWAKQQQP--------RPQGGSALMERIAGAPAKV---------QAGITDLIEKGIAMEW----DIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRY 360
            LP ++   L Q+ A+G CH  E DDR  + L  + E  A++ALEEF S E   +RK SA+ MG+ RK    Y+   A G SG  P  L SP   G      Y  +  +            R +  S+ ++ ++ +   V          A   D +++  +  W    D+D R  +A   ++E + +  ++E    D +R+RN SAY+MGL ++Y
Sbjct:  355 LPTAVGEGLQQVFASGVCHPSEFDDRAMEILVALKEPEAVRALEEFASVEPGRVRKPSAFWMGLARK----YKGLGASGVSG--PQNLNSPSSRGYGNQYGYESYDRRSAADEHAYVSGHRQRHYSSQIDSLSASRGPVALNRPPEFRHALAADRLQRIFSETWLSPNDLDDRAIDAIKRMSESEEMNVVDEILRTDPSRVRNISAYIMGLYRKY 563          
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Match: R7QVV3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QVV3_CHOCR)

HSP 1 Score: 79.3 bits (194), Expect = 2.150e-12
Identity = 56/197 (28.43%), Postives = 91/197 (46.19%), Query Frame = 0
Query:  167 LPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQALEEFMSTERKNIRKVSAYLMGVIRKHADNYREFVAVGTSGGPPAGLPSPYEAGLKRIREYNDFWAKQQQPRPQGGSALMERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSG 363
            LP ++   L ++  +G CH  + DDR    L ++ E  A++AL EF + E   +R  SA+ MG+ RK+  + R   A G   GP + +PS Y +G                  P  G        G+ + +   + +L   G  +   +D R   A   L E+ G+  + E    +  R+RN SAY+MGL K++ +G
Sbjct:  288 LPPTVSDALQRVFTSGVCHPSQFDDRAMDILVDLAEPDAVRALSEFAAMEPGRVRNPSAFWMGLARKYKGHSR---APGGRMGPDS-VPSNYGSGFD----------------PSDGYGRSTSAQGSFSALDQRLDELANNGTLLRNVLDDRALEALRRLPEQDGLAVLAELP--EPARVRNPSAYVMGLCKKFANG 462          
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Match: A0A7S0LZI5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LZI5_9CRYP)

HSP 1 Score: 71.6 bits (174), Expect = 4.160e-10
Identity = 52/227 (22.91%), Postives = 96/227 (42.29%), Query Frame = 0
Query:  139 PLFNAYGQPMATFIPPHMPM---YQAGTTEMLPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQALEEFMSTERKNIRKVSAYLMGVIRKHADNYREFVAVGTSGGPPAGLPSPYEAGLKRIREYNDFWAKQQQPRPQGGSALMERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKS 362
            PL NA   P      P + +   +   T  M+P  +Q RL+ + A+G     E+D RC + LR +PEH+ L+ + +F   +  +I   + + MG+I++    +RE VA                                        +      +G P  VQ  +  L    +    ++D +       L E   VE +++F   +++ IRNK+A+ +G++KR+++
Sbjct:  165 PLGNALSAPSMGAYGPGLGLSSSFSGDTAGMIPG-VQARLEAIFASGKVRREELDQRCLEQLRSLPEHVGLEVVGKFAEADLSSINSKAGFFMGIIKR----FREQVAASDP------------------------------------NVTASAFSGLPFVVQTKLEALFSTRLVGRNELDAKCYMELRQLPEPIAVEVMDKFCETNLSDIRNKTAFFLGIVKRFRT 350          
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Match: A0A7S0T633_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T633_9RHOD)

HSP 1 Score: 68.2 bits (165), Expect = 6.870e-9
Identity = 59/238 (24.79%), Postives = 96/238 (40.34%), Query Frame = 0
Query:  167 LPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQALEEFMSTERKNIRKVSAYLMGVIRKHADNYREF----------------VAVGTSGGPPAGLPSPYEAG-----------------------LKRIREYNDFWA--KQQQPRPQGGSAL-MERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKS 362
            LP  +   +++L +   C   +ID+R   FL  +PEH+AL A+E+    +   IR   A++M + ++  +  RE                    G  GG P G P P + G                               D +A  K  Q +PQ    +    ++  P  V  G+  +   G+      D R     + L E + + A+ EFAS +  R+RN SA+ MGL ++YK+
Sbjct:   88 LPPKVFDAVERLFSDSICEREDIDNRALDFLATLPEHVALTAVEDISHRDFSTIRNRPAFVMSIFKRVVNPPREMHPSSSGPGPYGSSGYGAGRGPIGGGPRG-PLPPQRGNGMGGPPSRVLMGPPGXXXXXXXXXXXAGGMDMYAVPKPHQLQPQQVVTVDPAALSHLPPMVADGLQRVFAAGVCHPSQFDDRAMEILINLKEVEAIRALNEFASVEPGRVRNPSAFWMGLARKYKA 324          
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Match: A0A7S0WXJ6_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WXJ6_9CHLO)

HSP 1 Score: 65.9 bits (159), Expect = 2.470e-8
Identity = 59/210 (28.10%), Postives = 90/210 (42.86%), Query Frame = 0
Query:  158 MYQAGTTEMLPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQALEEF---MSTERKNIRKVSAYLMGVIRKHADNYREFVAVGTSGGPPAGLPSPYEAGLKRIREYNDFWAKQQQPRPQGGSALMERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGA 364
            M Q      +P S+  RL  L      +  E+D    + L ++ E  AL ALEE    +S++R  +R V AY  G+ RK+ D              PA  P   + G  +I  Y +           G +A  +     P +V+  +   I +G       D R  +    L E+ G  A+EE A  D+T++RN SAY MG+  ++  GA
Sbjct:  150 MAQHPRASQMPMSVLERLGVLYEE---YHVELDQGAWEILLQLSETAALGALEEVYAALSSDR-GVRNVCAYFTGIARKYLD--------------PAHAPP--QGGTSQI--YGE-----------GVAAGDDAFTSLPPRVRQALESYISQGTFERHKFDFRAVDTLRKLNEDDGCSALEELARNDVTKLRNFSAYFMGICNKFLRGA 326          
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Match: A0A835Z7I3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7I3_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.190e-7
Identity = 34/84 (40.48%), Postives = 55/84 (65.48%), Query Frame = 0
Query:  285 ALMERIAGAPAKVQAGITDLIEKGIAMEWDIDV-RVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGAPPP 367
            AL +R++    +V      L+ +G+ +  ++D  ++ +A   +T+   V A++EF+SCDMTR+R+KSAYLMGLLKRY+ G   P
Sbjct: 1286 ALYKRVS---ERVYFTFQALVAQGLLVSEEVDDDKLADAVGKITDASAVAALDEFSSCDMTRVRDKSAYLMGLLKRYRGGPETP 1366          
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Match: A0A7S0M3R0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M3R0_9CRYP)

HSP 1 Score: 58.9 bits (141), Expect = 2.150e-6
Identity = 29/81 (35.80%), Postives = 43/81 (53.09%), Query Frame = 0
Query:  285 ALMERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGAP 365
            AL ER  G P  V   +  + ++G     D++ RV +A   + E   + A+++F   D  RIRNK AYL G++K  K G P
Sbjct:  140 ALGERKEGFPKSVHDALEIIFKEGTLKREDVEERVLDALRAIPEADALRALDQFGQGDQARIRNKGAYLWGIIKNAKDGRP 220          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5KRV7_9PHAE7.920e-21395.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG90_ECTSI2.440e-18776.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1X6PIJ9_PORUM1.210e-1526.98Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1EQC1_9RHOD8.640e-1529.77Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
R7QVV3_CHOCR2.150e-1228.43Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0LZI5_9CRYP4.160e-1022.91Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S0T633_9RHOD6.870e-924.79Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
A0A7S0WXJ6_9CHLO2.470e-828.10Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A835Z7I3_9STRA2.190e-740.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0M3R0_9CRYP2.150e-635.80Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041337Heterogeneous nuclear ribonucleoprotein Q acidic domainPFAMPF18360hnRNP_Q_AcDcoord: 3..40
e-value: 6.9E-7
score: 29.1
coord: 167..233
e-value: 9.1E-16
score: 57.6
coord: 294..361
e-value: 1.8E-15
score: 56.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1745contigEcto-sp13_S_contig1745:7092..14778 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1745.5230.1mRNA_Ecto-sp13_S_contig1745.5230.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1745 3742..15211 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1745.5230.1 ID=prot_Ecto-sp13_S_contig1745.5230.1|Name=mRNA_Ecto-sp13_S_contig1745.5230.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=374bp
MVFFRDLTEKEAEAAMDEFGQSDITSIRNKSAFLMSILRRHHQASSTPAG
GAAAAAAAAAAAPGGRPAAAAAAAAAAAAAAAAAGMGMGMGMGMGMYGAH
PFTGAPHLSPYGYMDPSMAGTAPFADFYGGMYGHAPPMPLFNAYGQPMAT
FIPPHMPMYQAGTTEMLPASIQLRLDQLAATGFCHAGEIDDRCRKFLREV
PEHIALQALEEFMSTERKNIRKVSAYLMGVIRKHADNYREFVAVGTSGGP
PAGLPSPYEAGLKRIREYNDFWAKQQQPRPQGGSALMERIAGAPAKVQAG
ITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKS
AYLMGLLKRYKSGAPPPPGLAQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041337hnRNP_Q_AcD