mRNA_Ecto-sp13_S_contig1745.5230.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Match: A0A6H5KRV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV7_9PHAE) HSP 1 Score: 670 bits (1729), Expect = 2.450e-226 Identity = 387/408 (94.85%), Postives = 394/408 (96.57%), Query Frame = 1
Query: 1 RNQAGPDGLSPSIASRLEKLYESGFIQKTDVDQRCMVFFRDLTEKEAEAAMDEFGQSDITSIRNKSAFLMSILRXXXXXXXXXXXXXXXXXXXXXXXPGGRPAAXXXXXXXXXXXXXXXGMXXXXXXXXXMYGAHPFTGAPHLSPYGYMDPSMAGTAPFADFYGGMYGHAPPMPLFNAYGQPMATFIPPHMPMYQAGTTEMLPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQALEEFMSTERKNIRKVSAYLMGVIRKHADNYREFVAVGTSGGPPAGLPSPYEAGLKRIREYNDFWAKQQQPRPQGGSALMERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGAPPPPGLAQR 1224
R AGPDGLSPSIASRLEKLYESGFIQK DVDQRCMVFFRDLTEKEAEAAMDEFGQSDITSIRNKSAFLMSILRXXXXXXXXXXXXXXXXXXXXXXXPGGRPAAXXXXXXXXXXXXX XXXXXXXXXMYGAHPF G P++SPYGYMDPSM G+ PFA+FYGGMYGHAP MPLFNAYGQPMATFIPPH+PMYQAGTTEMLPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQA+EEFMSTERKNIRKVSAYLMGVIRKHADNYR+FVAVGTSGGPPAGLPSPYEAGLKR REYNDFWAKQQQPRPQG SALMERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGAPPPPGLAQR
Sbjct: 237 RMGAGPDGLSPSIASRLEKLYESGFIQKADVDQRCMVFFRDLTEKEAEAAMDEFGQSDITSIRNKSAFLMSILRXXXXXXXXXXXXXXXXXXXXXXXPGGRPAAXXXXXXXXXXXXXGMXXXXXXXXXXXMYGAHPFAGVPYMSPYGYMDPSMTGSVPFAEFYGGMYGHAPSMPLFNAYGQPMATFIPPHIPMYQAGTTEMLPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQAIEEFMSTERKNIRKVSAYLMGVIRKHADNYRDFVAVGTSGGPPAGLPSPYEAGLKRYREYNDFWAKQQQPRPQGCSALMERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGAPPPPGLAQR 644
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Match: D8LG90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG90_ECTSI) HSP 1 Score: 593 bits (1529), Expect = 4.150e-200 Identity = 315/408 (77.21%), Postives = 317/408 (77.70%), Query Frame = 1
Query: 1 RNQAGPDGLSPSIASRLEKLYESGFIQKTDVDQRCMVFFRDLTEKEAEAAMDEFGQSDITSIRNKSAFLMSILRXXXXXXXXXXXXXXXXXXXXXXXPGGRPAAXXXXXXXXXXXXXXXGMXXXXXXXXXMYGAHPFTGAPHLSPYGYMDPSMAGTAPFADFYGGMYGHAPPMPLFNAYGQPMATFIPPHMPMYQAGTTEMLPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQALEEFMSTERKNIRKVSAYLMGVIRKHADNYREFVAVGTSGGPPAGLPSPYEAGLKRIREYNDFWAKQQQPRPQGGSALMERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGAPPPPGLAQR 1224
R AG DGLSPSIASRLEKLYESGFIQK DVDQRCMVFFRDLTEKEAEAAMDEFGQSDITSIRNKSAFLMSILR DFYGGMYGHAPPMPLFNAYGQPMATFIPPHMPMYQAGTTEMLPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQA+EEFMSTERKNIRKVSAYLMGVIRKHADNYR FVAVGTSGGPPAGLPSPYEAGLKRIREYNDFWAKQQQPRPQGGSAL+ERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGAPPPPGLAQR
Sbjct: 76 RMGAGTDGLSPSIASRLEKLYESGFIQKADVDQRCMVFFRDLTEKEAEAAMDEFGQSDITSIRNKSAFLMSILRRHHQ----------------------------------------------------------------------------------DFYGGMYGHAPPMPLFNAYGQPMATFIPPHMPMYQAGTTEMLPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQAIEEFMSTERKNIRKVSAYLMGVIRKHADNYRGFVAVGTSGGPPAGLPSPYEAGLKRIREYNDFWAKQQQPRPQGGSALLERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGAPPPPGLAQR 401
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Match: A0A7S1EQC1_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQC1_9RHOD) HSP 1 Score: 97.4 bits (241), Expect = 6.090e-17 Identity = 105/409 (25.67%), Postives = 160/409 (39.12%), Query Frame = 1
Query: 25 LSPSIASRLEKLYESGFIQKTDVDQRCMVFFRDLTEKEAEAAMDEFGQSDITSIRNKSAFLMSILRXXXXXXXXXXXXXXXXXXXXXXXPGGRPAAXXXXXXXXXXXXXXXGMXXXXXXXXXMYGAHPFTGAPHLSPYG-YMDPSMAGTAPFADFYGGMYGHAPPMPLFNAYGQPMATFIPPHMPMYQAGTTEMLPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQALEEFMSTERKNIRKVSAYLMGVIRKHADNYREFVAVGTSGGPPAGLPSPYEAGLKRIREYNDFWAKQQQP--------RPQGGSALMERIAGAPAKV---------QAGITDLIEKGIAMEW----DIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRY 1185
LSP + + L L+ G D+D R + F L +K A A+D+ D ++IRN+ AF+MSI + R A G P G L P Y+ PS P A + P P A +PP + LP ++ L Q+ A+G CH E DDR + L + E A++ALEEF S E +RK SA+ MG+ RK Y+ A G SG P L SP G Y + + R + S+ ++ ++ + V A D +++ + W D+D R +A ++E + + ++E D +R+RN SAY+MGL ++Y
Sbjct: 202 LSPEVQNALRALFTEGVCDPADIDTRSVEFLSGLPDKIALTAIDDIHHRDFSTIRNRPAFIMSIFKRVANPQ--------------------RDAVGGPAPFVGSVQPYSSGFSRSIPRP-------PPRGMRQLPPEPTYVRPS----GPRASEHNPDVFRQPAAPXXXXXX---AATVPPEALAH-------LPTAVGEGLQQVFASGVCHPSEFDDRAMEILVALKEPEAVRALEEFASVEPGRVRKPSAFWMGLARK----YKGLGASGVSG--PQNLNSPSSRGYGNQYGYESYDRRSAADEHAYVSGHRQRHYSSQIDSLSASRGPVALNRPPEFRHALAADRLQRIFSETWLSPNDLDDRAIDAIKRMSESEEMNVVDEILRTDPSRVRNISAYIMGLYRKY 563
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Match: A0A1X6PIJ9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIJ9_PORUM) HSP 1 Score: 89.4 bits (220), Expect = 2.380e-14 Identity = 68/252 (26.98%), Postives = 104/252 (41.27%), Query Frame = 1
Query: 604 LPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQALEEFMSTERKNIRKVSAYLMGVIRKHADNYREFVAVGTSGGPPAGLPS----------PYEA--GLKRIREYN-----DFWAKQQQPR-------------------------------------PQGGSALMERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGA 1197
LP + L ++ ATG CH + DDR L E+P H A++AL EF + +R SA+ MG+ RKH ++G G P G+P+ PY A G + + D+ QQP GG A G ++V A + L+ + D+D R A L E+ + A++E A+ + +R+RN SAY+MGL ++Y S +
Sbjct: 372 LPGPVGEGLQRVFATGVCHPSQFDDRAMDILVELPTHAAVRALSEFAAVPPSRVRNPSAFWMGLARKHKSAIAA-ASLGGQGTPQGGMPNMGYGPPPMAQPYGAPQGYGQPMHHQPPPSYDYHQVHQQPAYGGYEYGGQYGHGGYGPPPMVSGXXXXYDSRXXPVSAGMGGVAPAYGAQGGGSRVAARVDALVAARVVRPGDVDARAIEALGRLREQDALAALDELAAAEPSRVRNPSAYVMGLARKYASAS 622
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Match: R7QVV3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QVV3_CHOCR) HSP 1 Score: 79.3 bits (194), Expect = 2.550e-11 Identity = 56/197 (28.43%), Postives = 91/197 (46.19%), Query Frame = 1
Query: 604 LPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQALEEFMSTERKNIRKVSAYLMGVIRKHADNYREFVAVGTSGGPPAGLPSPYEAGLKRIREYNDFWAKQQQPRPQGGSALMERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSG 1194
LP ++ L ++ +G CH + DDR L ++ E A++AL EF + E +R SA+ MG+ RK+ + R A G GP + +PS Y +G P G G+ + + + +L G + +D R A L E+ G+ + E + R+RN SAY+MGL K++ +G
Sbjct: 288 LPPTVSDALQRVFTSGVCHPSQFDDRAMDILVDLAEPDAVRALSEFAAMEPGRVRNPSAFWMGLARKYKGHSR---APGGRMGPDS-VPSNYGSGFD----------------PSDGYGRSTSAQGSFSALDQRLDELANNGTLLRNVLDDRALEALRRLPEQDGLAVLAELP--EPARVRNPSAYVMGLCKKFANG 462
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Match: A0A7S0LZI5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LZI5_9CRYP) HSP 1 Score: 71.6 bits (174), Expect = 2.870e-9 Identity = 52/227 (22.91%), Postives = 96/227 (42.29%), Query Frame = 1
Query: 520 PLFNAYGQPMATFIPPHMPM---YQAGTTEMLPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQALEEFMSTERKNIRKVSAYLMGVIRKHADNYREFVAVGTSGGPPAGLPSPYEAGLKRIREYNDFWAKQQQPRPQGGSALMERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKS 1191
PL NA P P + + + T M+P +Q RL+ + A+G E+D RC + LR +PEH+ L+ + +F + +I + + MG+I++ +RE VA + +G P VQ + L + ++D + L E VE +++F +++ IRNK+A+ +G++KR+++
Sbjct: 165 PLGNALSAPSMGAYGPGLGLSSSFSGDTAGMIPG-VQARLEAIFASGKVRREELDQRCLEQLRSLPEHVGLEVVGKFAEADLSSINSKAGFFMGIIKR----FREQVAASDP------------------------------------NVTASAFSGLPFVVQTKLEALFSTRLVGRNELDAKCYMELRQLPEPIAVEVMDKFCETNLSDIRNKTAFFLGIVKRFRT 350
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Match: A0A7S0T633_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T633_9RHOD) HSP 1 Score: 68.2 bits (165), Expect = 4.830e-8 Identity = 59/238 (24.79%), Postives = 96/238 (40.34%), Query Frame = 1
Query: 604 LPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQALEEFMSTERKNIRKVSAYLMGVIRKHADNYREF----------------VAVGTSGGPPAGLPSPYEAG-----------------------LKRIREYNDFWA--KQQQPRPQGGSAL-MERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKS 1191
LP + +++L + C +ID+R FL +PEH+AL A+E+ + IR A++M + ++ + RE G GG P G P P + G D +A K Q +PQ + ++ P V G+ + G+ D R + L E + + A+ EFAS + R+RN SA+ MGL ++YK+
Sbjct: 88 LPPKVFDAVERLFSDSICEREDIDNRALDFLATLPEHVALTAVEDISHRDFSTIRNRPAFVMSIFKRVVNPPREMHPSSSGPGPYGSSGYGAGRGPIGGGPRG-PLPPQRGNGMGGPPSRVLMGPPGXXXXXXXXXXXAGGMDMYAVPKPHQLQPQQVVTVDPAALSHLPPMVADGLQRVFAAGVCHPSQFDDRAMEILINLKEVEAIRALNEFASVEPGRVRNPSAFWMGLARKYKA 324
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Match: A0A7S0WXJ6_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WXJ6_9CHLO) HSP 1 Score: 65.9 bits (159), Expect = 1.380e-7 Identity = 59/210 (28.10%), Postives = 90/210 (42.86%), Query Frame = 1
Query: 577 MYQAGTTEMLPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQALEEF---MSTERKNIRKVSAYLMGVIRKHADNYREFVAVGTSGGPPAGLPSPYEAGLKRIREYNDFWAKQQQPRPQGGSALMERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGA 1197
M Q +P S+ RL L + E+D + L ++ E AL ALEE +S++R +R V AY G+ RK+ D PA P + G +I Y + G +A + P +V+ + I +G D R + L E+ G A+EE A D+T++RN SAY MG+ ++ GA
Sbjct: 150 MAQHPRASQMPMSVLERLGVLYEE---YHVELDQGAWEILLQLSETAALGALEEVYAALSSDR-GVRNVCAYFTGIARKYLD--------------PAHAPP--QGGTSQI--YGE-----------GVAAGDDAFTSLPPRVRQALESYISQGTFERHKFDFRAVDTLRKLNEDDGCSALEELARNDVTKLRNFSAYFMGICNKFLRGA 326
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Match: D8LG91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG91_ECTSI) HSP 1 Score: 59.3 bits (142), Expect = 1.400e-7 Identity = 32/37 (86.49%), Postives = 33/37 (89.19%), Query Frame = 1
Query: 1255 ASVGPARSVRRRLVSSRRSPEFL-PRVIPKRTLHD*T 1362
AS+GP RSVRRRLVSSRRSPEFL PRVIPKRTL D T
Sbjct: 18 ASLGPVRSVRRRLVSSRRSPEFLLPRVIPKRTLCDVT 54
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Match: A0A835Z7I3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7I3_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.970e-7 Identity = 38/97 (39.18%), Postives = 60/97 (61.86%), Query Frame = 1
Query: 958 ALMERIAGAPAKVQAGITDLIEKGIAMEWDIDV-RVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGAPPPPGLAQR*SEPDES 1245
AL +R++ +V L+ +G+ + ++D ++ +A +T+ V A++EF+SCDMTR+R+KSAYLMGLLKRY+ G P +R PD S
Sbjct: 1286 ALYKRVS---ERVYFTFQALVAQGLLVSEEVDDDKLADAVGKITDASAVAALDEFSSCDMTRVRDKSAYLMGLLKRYRGGPETPTYDGRRPKRPDGS 1379 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1745.5230.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1745.5230.1 >prot_Ecto-sp13_S_contig1745.5230.1 ID=prot_Ecto-sp13_S_contig1745.5230.1|Name=mRNA_Ecto-sp13_S_contig1745.5230.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=374bp MVFFRDLTEKEAEAAMDEFGQSDITSIRNKSAFLMSILRRHHQASSTPAGback to top mRNA from alignment at Ecto-sp13_S_contig1745:3742..15211- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1745.5230.1 ID=mRNA_Ecto-sp13_S_contig1745.5230.1|Name=mRNA_Ecto-sp13_S_contig1745.5230.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=11470bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1745:3742..15211- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1745:3742..15211- >mRNA_Ecto-sp13_S_contig1745.5230.1 ID=mRNA_Ecto-sp13_S_contig1745.5230.1|Name=mRNA_Ecto-sp13_S_contig1745.5230.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1122bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1745:3742..15211- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |