prot_Ecto-sp13_S_contig17430.5222.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17430.5222.1
Unique Nameprot_Ecto-sp13_S_contig17430.5222.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length126
Homology
BLAST of mRNA_Ecto-sp13_S_contig17430.5222.1 vs. uniprot
Match: A0A6H5JIE6_9PHAE (C2H2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIE6_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 3.340e-59
Identity = 103/125 (82.40%), Postives = 103/125 (82.40%), Query Frame = 0
Query:    1 VDDDLPGQGQFYCTPCARHFTDQQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKEAYPPAHPVTSSPAAAATVPPPDSRVLAVGGVEATGKAGAEVATRTGASGMDVTGGGEDEDDPDL 125
            VDDDLPGQGQFYCTPCARHFTDQQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKE                    PDSRVLAVGG EATGKAGAEVAT TGASGMDVTGGGEDEDDPDL
Sbjct:   56 VDDDLPGQGQFYCTPCARHFTDQQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKETXXXXXXXXXXXXXXXXXXXPDSRVLAVGGAEATGKAGAEVATTTGASGMDVTGGGEDEDDPDL 180          
BLAST of mRNA_Ecto-sp13_S_contig17430.5222.1 vs. uniprot
Match: A0A836CC06_9STRA (C2H2-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC06_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.540e-26
Identity = 50/67 (74.63%), Postives = 56/67 (83.58%), Query Frame = 0
Query:    2 DDDLPGQGQFYCTPCARHFTDQQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKEAYPPAHP 68
            DDDLPG GQFYC PCARHFTDQ T  TH +SKLHKRR+KDVAQ++YTQ EA+ GAG +KE Y PAHP
Sbjct:   57 DDDLPGGGQFYCAPCARHFTDQGTLDTHTKSKLHKRRLKDVAQKKYTQKEADAGAGKSKEVYAPAHP 123          
BLAST of mRNA_Ecto-sp13_S_contig17430.5222.1 vs. uniprot
Match: A0A024G9F2_9STRA (C2H2-type domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G9F2_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.390e-25
Identity = 46/72 (63.89%), Postives = 58/72 (80.56%), Query Frame = 0
Query:    1 VDDDLPGQGQFYCTPCARHFTDQQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKEAYPPAHPVTSS 72
            +D+DLPG GQ+YCTPCARHF D  T+  H+R+K+HKRR+KDV QEQYTQ EA+ GAG T+E Y PAHP  ++
Sbjct:   52 IDEDLPGLGQYYCTPCARHFIDATTRDLHVRTKVHKRRLKDVRQEQYTQREADLGAGKTREEYVPAHPTEAT 123          
BLAST of mRNA_Ecto-sp13_S_contig17430.5222.1 vs. uniprot
Match: A0A4D9CVU1_9STRA (C2H2-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVU1_9STRA)

HSP 1 Score: 103 bits (256), Expect = 4.770e-25
Identity = 50/66 (75.76%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    2 DDDLPGQGQFYCTPCARHFTDQQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKEAYPPAH 67
            DDDLPG GQFYC PCARHF DQQ    H RSK+HKRR+KDVAQEQYTQ EAER  GMT+E  PPAH
Sbjct:   58 DDDLPGAGQFYCRPCARHFGDQQCLDHHTRSKVHKRRLKDVAQEQYTQREAERAGGMTEEVLPPAH 123          
BLAST of mRNA_Ecto-sp13_S_contig17430.5222.1 vs. uniprot
Match: A0A024UJ99_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJ99_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.940e-24
Identity = 47/72 (65.28%), Postives = 54/72 (75.00%), Query Frame = 0
Query:    1 VDDDLPGQGQFYCTPCARHFTDQQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKEAYPPAHPVTSS 72
            +D+DLPG GQ+YCTPC RHF     +  HI SK+HKRRMKDVAQEQYTQ EAER AG + E Y PAHP  +S
Sbjct:   52 LDEDLPGLGQYYCTPCGRHFITANARDVHIASKVHKRRMKDVAQEQYTQKEAERAAGKSIETYTPAHPTAAS 123          
BLAST of mRNA_Ecto-sp13_S_contig17430.5222.1 vs. uniprot
Match: A0A8K1FHU3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHU3_PYTOL)

HSP 1 Score: 99.0 bits (245), Expect = 3.200e-24
Identity = 47/65 (72.31%), Postives = 53/65 (81.54%), Query Frame = 0
Query:    1 VDDDLPGQGQFYCTPCARHFTDQQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKEAYPP 65
            VD+DLPG GQ+YCTPC RHF D +T+  HI+ KLHKRRMKDVAQEQYTQAEAE GAG + E Y P
Sbjct:   52 VDEDLPGLGQYYCTPCGRHFIDAKTRDVHIKGKLHKRRMKDVAQEQYTQAEAEAGAGRSVEKYVP 116          
BLAST of mRNA_Ecto-sp13_S_contig17430.5222.1 vs. uniprot
Match: F0WBU9_9STRA (Uncharacterized protein AlNc14C53G4140 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WBU9_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.830e-23
Identity = 45/68 (66.18%), Postives = 54/68 (79.41%), Query Frame = 0
Query:    1 VDDDLPGQGQFYCTPCARHFTDQQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKEAYPPAHP 68
            +D+DLPG GQ+YCTPCARHF D  T+  HIR+K+HKRR+KDV QEQYTQ EA+ GAG T+E Y  A P
Sbjct:   52 IDEDLPGLGQYYCTPCARHFIDASTRELHIRTKVHKRRLKDVLQEQYTQREADLGAGKTREQYEAARP 119          
BLAST of mRNA_Ecto-sp13_S_contig17430.5222.1 vs. uniprot
Match: A0A662Y0F3_9STRA (C2H2-type domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0F3_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.930e-23
Identity = 46/67 (68.66%), Postives = 53/67 (79.10%), Query Frame = 0
Query:    2 DDDLPGQGQFYCTPCARHFTDQQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKEAYPPAHP 68
            D+DLPG GQFYCTPC RHF D  T+  HI++K+HKRR+KDVAQ+QYTQ EA  GAG T E Y PAHP
Sbjct:   54 DEDLPGLGQFYCTPCGRHFIDAITRDVHIKTKVHKRRLKDVAQKQYTQKEAMLGAGKTVETYTPAHP 120          
BLAST of mRNA_Ecto-sp13_S_contig17430.5222.1 vs. uniprot
Match: W2FRC2_PHYPR (C2H2-type domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2FRC2_PHYPR)

HSP 1 Score: 95.9 bits (237), Expect = 5.630e-23
Identity = 44/67 (65.67%), Postives = 54/67 (80.60%), Query Frame = 0
Query:    2 DDDLPGQGQFYCTPCARHFTDQQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKEAYPPAHP 68
            D+DLPG GQFYCTPC RHF D +T+  H+++K+HKRR+KDVAQ+QYTQ EA +GAG   E Y PAHP
Sbjct:   55 DEDLPGLGQFYCTPCGRHFIDAKTRDVHLKTKVHKRRLKDVAQKQYTQNEAMQGAGKGVETYKPAHP 121          
BLAST of mRNA_Ecto-sp13_S_contig17430.5222.1 vs. uniprot
Match: K3X4G9_GLOUD (ELMO domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4G9_GLOUD)

HSP 1 Score: 102 bits (253), Expect = 5.740e-23
Identity = 49/70 (70.00%), Postives = 56/70 (80.00%), Query Frame = 0
Query:    2 DDDLPGQGQFYCTPCARHFTDQQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKEAYPPAHPVTS 71
            D+DLPG GQFYCTPCARHF D  T+  H+++K+HKRRMKDVAQ+QYTQ EAE GAG T E Y PAHP  S
Sbjct:  368 DEDLPGLGQFYCTPCARHFIDAVTRDVHLKTKVHKRRMKDVAQKQYTQKEAELGAGKTVEKYTPAHPKES 437          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17430.5222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIE6_9PHAE3.340e-5982.40C2H2-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CC06_9STRA1.540e-2674.63C2H2-type domain-containing protein n=1 Tax=Tribon... [more]
A0A024G9F2_9STRA1.390e-2563.89C2H2-type domain-containing protein n=1 Tax=Albugo... [more]
A0A4D9CVU1_9STRA4.770e-2575.76C2H2-type domain-containing protein n=1 Tax=Nannoc... [more]
A0A024UJ99_9STRA2.940e-2465.28C2H2-type domain-containing protein n=1 Tax=Aphano... [more]
A0A8K1FHU3_PYTOL3.200e-2472.31Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0WBU9_9STRA1.830e-2366.18Uncharacterized protein AlNc14C53G4140 n=1 Tax=Alb... [more]
A0A662Y0F3_9STRA1.930e-2368.66C2H2-type domain-containing protein n=1 Tax=Nothop... [more]
W2FRC2_PHYPR5.630e-2365.67C2H2-type domain-containing protein n=9 Tax=Phytop... [more]
K3X4G9_GLOUD5.740e-2370.00ELMO domain-containing protein n=1 Tax=Globisporan... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003604Matrin/U1-C-like, C2H2-type zinc fingerSMARTSM00451ZnF_U1_5coord: 8..42
e-value: 0.0018
score: 27.6
IPR022755Zinc finger, double-stranded RNA bindingPFAMPF12171zf-C2H2_jazcoord: 10..36
e-value: 1.1E-8
score: 35.1
NoneNo IPR availableGENE3D3.30.160.60coord: 1..61
e-value: 3.7E-27
score: 95.9
NoneNo IPR availablePANTHERPTHR46095FAMILY NOT NAMEDcoord: 1..67
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 13..35
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 11..40
score: 9.182
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 2..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17430contigEcto-sp13_S_contig17430:2406..3687 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17430.5222.1mRNA_Ecto-sp13_S_contig17430.5222.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17430 2406..3687 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17430.5222.1 ID=prot_Ecto-sp13_S_contig17430.5222.1|Name=mRNA_Ecto-sp13_S_contig17430.5222.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=126bp
VDDDLPGQGQFYCTPCARHFTDQQTKSTHIRSKLHKRRMKDVAQEQYTQA
EAERGAGMTKEAYPPAHPVTSSPAAAATVPPPDSRVLAVGGVEATGKAGA
EVATRTGASGMDVTGGGEDEDDPDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003604Matrin/U1-like-C_Znf_C2H2
IPR022755Znf_C2H2_jaz
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf