prot_Ecto-sp13_S_contig17361.5185.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17361.5185.1
Unique Nameprot_Ecto-sp13_S_contig17361.5185.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length194
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17361.5185.1 vs. uniprot
Match: A0A6H5JG23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG23_9PHAE)

HSP 1 Score: 241 bits (615), Expect = 2.950e-70
Identity = 176/207 (85.02%), Postives = 178/207 (85.99%), Query Frame = 0 
Query:    1 MRLHLPLLFLLEF----TGSASGLKISPPS---------THTSCTPLKATAGRGGSKVPRKERTSAPDGSKDTREAWRWGGFVRPKVYLASKQSKNKXXXXXXXXXXXXXXGDIGTAGSDIGTAMAIASQTTEVVVATIASTGAANALLTPLHRWSSSRKRVAEAVEAAXXXXXXXXXXXXXXXXXXXXXDGTITTNPWVAHLRAAL 194
            MRLH+ LLFLLEF    TGSASGLKISPP          THTSCTPLKATAGRGGSKVPRKERTSAPDGSKDTREAWRWGGFVRPKVY ASKQ+KN XXXXXXXXXXXXX  DIGTAGSD GTAMAI SQTTEVVVATIASTGAANALLTPLHRWSSSRKRVAEAVEA XXXXXXXXXXXXXXXXXXXXX     TNPWVAHLR  L
Sbjct:    1 MRLHVLLLFLLEFMLEFTGSASGLKISPPRFTAVTTSGRTHTSCTPLKATAGRGGSKVPRKERTSAPDGSKDTREAWRWGGFVRPKVYPASKQNKNXXXXXXXXXXXXXX--DIGTAGSDTGTAMAIVSQTTEVVVATIASTGAANALLTPLHRWSSSRKRVAEAVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXTNPWVAHLRVVL 205
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BLAST of mRNA_Ecto-sp13_S_contig17361.5185.1 vs. uniprot
Match: D7FH24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH24_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 1.050e-14
Identity = 74/84 (88.10%), Postives = 74/84 (88.10%), Query Frame = 0 
Query:  112 MAIASQTTEVVVATIASTGAANALLTPLHRWSSSRKRVAEAVEAAXXXXXXXXXXXXXXXXXXXXXDGTITT-NPWVAHLRAAL 194
            MAI SQTTEVVVATIASTGAANALLTPLHRWSSSRKRVAEAVEA XXXXXXXXXXXXXXXXXXXXX       NPWVA LRAAL
Sbjct:    1 MAIVSQTTEVVVATIASTGAANALLTPLHRWSSSRKRVAEAVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPWVALLRAAL 84
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17361.5185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JG23_9PHAE2.950e-7085.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH24_ECTSI1.050e-1488.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..194
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.828

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17361contigEcto-sp13_S_contig17361:2243..2824 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17361.5185.1mRNA_Ecto-sp13_S_contig17361.5185.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17361 2129..2824 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17361.5185.1 ID=prot_Ecto-sp13_S_contig17361.5185.1|Name=mRNA_Ecto-sp13_S_contig17361.5185.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=194bp
MRLHLPLLFLLEFTGSASGLKISPPSTHTSCTPLKATAGRGGSKVPRKER
TSAPDGSKDTREAWRWGGFVRPKVYLASKQSKNKSSSSDAGNNNKNGNGD
IGTAGSDIGTAMAIASQTTEVVVATIASTGAANALLTPLHRWSSSRKRVA
EAVEAAAAVKRLRQQQQRALFEQQQQEDGTITTNPWVAHLRAAL
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