prot_Ecto-sp13_S_contig17314.5167.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17314.5167.1
Unique Nameprot_Ecto-sp13_S_contig17314.5167.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length129
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17314.5167.1 vs. uniprot
Match: A0A6H5JWJ6_9PHAE (BRISC and BRCA1-A complex member 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ6_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 9.090e-21
Identity = 63/71 (88.73%), Postives = 63/71 (88.73%), Query Frame = 0 
Query:    1 MEQQQRQSCTAELRAQLGAMSVEGTSVSAGPGEGGGTTPIQTPAGGGXXXXXXXXXXGSSGLANLNERKRV 71
            MEQQQRQ  T ELRAQLGAMSVEGTSV AGPGEGGG TPIQTPAGGG XXXXXXX  GSSGLANLNERKRV
Sbjct:    1 MEQQQRQGGTTELRAQLGAMSVEGTSVLAGPGEGGGATPIQTPAGGGAXXXXXXXSRGSSGLANLNERKRV 71
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BLAST of mRNA_Ecto-sp13_S_contig17314.5167.1 vs. uniprot
Match: D7G9C7_ECTSI (BRISC and BRCA1-A complex member 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9C7_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 1.550e-18
Identity = 56/63 (88.89%), Postives = 57/63 (90.48%), Query Frame = 0 
Query:   20 MSVEGTSVSAGPGEGGGTTPIQTPAGGGXXXXXXXXXXGSSGLANLNERKRVLVASMSPEDVV 82
            MSVEGTSVSAGPGEGGG TPIQ PAGGG  XXXXXX  GSSGLANLN+RKRVLVASMSPEDVV
Sbjct:    1 MSVEGTSVSAGPGEGGGATPIQAPAGGGATXXXXXXSRGSSGLANLNDRKRVLVASMSPEDVV 63
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17314.5167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JWJ6_9PHAE9.090e-2188.73BRISC and BRCA1-A complex member 1 n=1 Tax=Ectocar... [more]
D7G9C7_ECTSI1.550e-1888.89BRISC and BRCA1-A complex member 1 n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17314contigEcto-sp13_S_contig17314:633..2204 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17314.5167.1mRNA_Ecto-sp13_S_contig17314.5167.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17314 554..2436 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17314.5167.1 ID=prot_Ecto-sp13_S_contig17314.5167.1|Name=mRNA_Ecto-sp13_S_contig17314.5167.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=129bp
MEQQQRQSCTAELRAQLGAMSVEGTSVSAGPGEGGGTTPIQTPAGGGATG
GVQGGSRGSSGLANLNERKRVLVASMSPEDVVNFCSLSFIFLRYVIVLDR
QSSCRIVVRAGFFIGGSGSAWENAVAGL*
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