prot_E-siliculosus-1a_F_contig107.498.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig107.498.1
Unique Nameprot_E-siliculosus-1a_F_contig107.498.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length236
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Match: D7FIZ9_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ9_ECTSI)

HSP 1 Score: 436 bits (1121), Expect = 4.140e-154
Identity = 223/235 (94.89%), Postives = 225/235 (95.74%), Query Frame = 0
Query:    1 MMDRLSFSIFAIAHFVTHAFVPATFPHLGVRRATGLRMRSSPADEGMSRGQVIRSVAAACVVSSTAWSTAAVGVSAKAPAPVMKLPDADDGVKPALRSGGEGSIPPFTVLPSGVQITDIVAGDGPVADAGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQINTRNKEPLTFEVKLTKVR 235
            MMDRLSFSIFAIA  VTHAFVPATFPHLGVRRATGLRM SSPADEGMSRG+V+RSVAAACV  STAWST AVGVSAKAPAPVMKLPD DD  KPALRSGGEGSIPPFTVLPSGVQITDIVAGDGPVAD GKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQINTRNKEPLTFEVKLTKVR
Sbjct:    1 MMDRLSFSIFAIAQLVTHAFVPATFPHLGVRRATGLRMCSSPADEGMSRGEVLRSVAAACVTGSTAWSTTAVGVSAKAPAPVMKLPD-DDSAKPALRSGGEGSIPPFTVLPSGVQITDIVAGDGPVADTGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQINTRNKEPLTFEVKLTKVR 234          
BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Match: A0A835YL48_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL48_9STRA)

HSP 1 Score: 171 bits (434), Expect = 2.330e-48
Identity = 85/156 (54.49%), Postives = 111/156 (71.15%), Query Frame = 0
Query:   83 MKLPDADDGVKPALR--SGGEG-SIPPFTVLPSGVQITDIVAGDGPVADAGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQINTRNKEPLTFEVKLTKVR 235
            + LP  ++   P L+  SG E  ++P F  LPSGV+ITDI  G+G     G  V+L+WV+RRSNGY+V SSE    +PFIYRVGDA++AIKG D+GIRGMK GG RR++VPPELGYV+G  D  PGP+P G GP++Q+  R  EP  FEV+++ VR
Sbjct:  193 VNLPVVEEFDTPQLKGLSGDENPNLPQFRALPSGVRITDIQVGNGAEVKEGSTVSLQWVLRRSNGYFVDSSEAHNYDPFIYRVGDAQKAIKGFDEGIRGMKQGGKRRMIVPPELGYVQGAADNKPGPVPTGYGPQRQVTNRKNEPFFFEVEVSHVR 348          
BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Match: A0A1Z5JCU4_FISSO (Peptidylprolyl isomerase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCU4_FISSO)

HSP 1 Score: 136 bits (342), Expect = 1.110e-36
Identity = 71/137 (51.82%), Postives = 94/137 (68.61%), Query Frame = 0
Query:  107 FTVLPSGVQITDIVAGDGP-VADAGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQI----NTRNKEP---LTFEVKLTKVR 235
            +  LPSGV   D+  G G  +A+ G  V L+WV+RRSNGY+V SSE   G PFI+ VGD K AI+G+D+G++GMK GG RRI++PP L YVEG +DG PGP+P G GP+QQ+    N R   P   +  EV+LT++R
Sbjct:   39 YKKLPSGVVYADLRPGSGTEMAEQGSRVNLQWVLRRSNGYFVDSSERNDGVPFIFEVGDGK-AIQGIDEGVQGMKVGGVRRILIPPALAYVEGLEDGKPGPLPAGFGPRQQMRRVMNVRKDVPGEYVFLEVQLTRLR 174          
BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Match: A0A7S4J203_9STRA (Peptidylprolyl isomerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J203_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.190e-36
Identity = 63/108 (58.33%), Postives = 79/108 (73.15%), Query Frame = 0
Query:  110 LPSGVQITDIVAGDGPVADAGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQI 217
            LPSGV   D+  G G V + GK V ++WV++RSNGY+V SS    G PFI+ VGD K A+ G+D+GIRGM+ GG RRI+VPP L YVEG +DG PGPIP G GPKQ++
Sbjct:  106 LPSGVMYVDLRPGSGDVVEEGKRVNVQWVLKRSNGYFVDSSSNNDGVPFIFTVGDPKGAMAGVDEGIRGMRVGGIRRIIVPPNLAYVEGVEDGKPGPIPAGFGPKQRM 213          
BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Match: B8C0A9_THAPS (Peptidylprolyl isomerase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0A9_THAPS)

HSP 1 Score: 135 bits (340), Expect = 2.500e-35
Identity = 73/136 (53.68%), Postives = 85/136 (62.50%), Query Frame = 0
Query:  107 FTVLPSGVQITDIVAGDGPVADAGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQIN----TRNKEP---LTFEVKLTKVR 235
            +  L SGV   DI AG G     G  V L+WV+RRSNGY+V SS      PFI+ VGD K AI GLD  +RGMK GGTRRI++PP+L YV G  DG PGPIP G GP+QQ+      R   P   +  EVKLTKVR
Sbjct:  128 YNKLESGVIYADINAGSGETVKEGSRVNLQWVLRRSNGYFVDSSAVSDSVPFIFTVGDPKGAIAGLDQAVRGMKVGGTRRILIPPKLAYVGGVDDGKPGPIPAGFGPRQQMRRVMEVRKDVPGEYIFLEVKLTKVR 263          
BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Match: A0A1Z5K3Y4_FISSO (Peptidylprolyl isomerase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K3Y4_FISSO)

HSP 1 Score: 133 bits (335), Expect = 5.480e-35
Identity = 71/137 (51.82%), Postives = 91/137 (66.42%), Query Frame = 0
Query:  107 FTVLPSGVQITDIVAGDGP-VADAGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQI----NTRNKEP---LTFEVKLTKVR 235
            +  LPSGV   D+  G G   A  G  V L+WV+RRSNGY+V SSE   G PFI+ VGD K AI+G+D+G+RGMK GG RRI++PP L YVEG +DG PGP+P   GP+QQ+    N R   P   +  EV+LT++R
Sbjct:   92 YKKLPSGVVYADLRPGSGTETAQQGSRVNLQWVLRRSNGYFVDSSERNDGVPFIFEVGDGK-AIQGIDEGVRGMKVGGVRRILIPPSLAYVEGLEDGKPGPLPACFGPRQQMRRVMNVRKDVPGEYVFLEVQLTRLR 227          
BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Match: A0A7S2E2F1_9STRA (Peptidylprolyl isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E2F1_9STRA)

HSP 1 Score: 130 bits (328), Expect = 6.360e-35
Identity = 67/134 (50.00%), Postives = 88/134 (65.67%), Query Frame = 0
Query:  110 LPSGVQITDIVAGDGP-VADAGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQIN----TRNKEP---LTFEVKLTKVR 235
            LPSGV   D+  G G  VA  G  V ++WV+R+SNGY+V SSE   G PFI+ VGD   AI G+D+GIRGMK GG RR+++PP+  YV G +DG PGP+P G GPKQQ+      R   P   +  E++LT++R
Sbjct:   14 LPSGVIYADLRVGSGEEVASEGSRVNIQWVLRKSNGYFVDSSEVSDGVPFIFTVGDKSGAIAGVDEGIRGMKVGGVRRLLIPPKFAYVTGVEDGKPGPVPAGFGPKQQMRRVMEVRRDVPGEYIFLEIQLTRLR 147          
BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Match: A0A7S2E4F5_9STRA (Peptidylprolyl isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E4F5_9STRA)

HSP 1 Score: 131 bits (329), Expect = 4.120e-33
Identity = 67/137 (48.91%), Postives = 89/137 (64.96%), Query Frame = 0
Query:  107 FTVLPSGVQITDIVAGDGP-VADAGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQIN----TRNKEP---LTFEVKLTKVR 235
            +  LPSGV   D+  G G  VA  G  V ++WV+R+SNGY+V SSE   G PFI+ VGD   AI G+D+GIRGMK GG RR+++PP+  YV G +DG PGP+P G GPKQQ+      R   P   +  E++LT++R
Sbjct:  186 YKKLPSGVIYADLRVGSGEEVASEGSRVNIQWVLRKSNGYFVDSSEVSDGVPFIFTVGDKSGAIAGVDEGIRGMKVGGVRRLLIPPKFAYVTGVEDGKPGPVPAGFGPKQQMRRVMEVRRDVPGEYIFLEIQLTRLR 322          
BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Match: A0A6U3UST0_9STRA (Peptidylprolyl isomerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3UST0_9STRA)

HSP 1 Score: 129 bits (323), Expect = 8.340e-33
Identity = 64/136 (47.06%), Postives = 88/136 (64.71%), Query Frame = 0
Query:  107 FTVLPSGVQITDIVAGDGPVADAGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQIN----TRNKEP---LTFEVKLTKVR 235
            +  LPSGV   D+  G+G  A  G    ++WV+R+SNGY+V SSE   G PFI+ VGD   AI G+D+GIRGMK GG RR+++ P+  YV G +DG PGP+P+G GPKQQ+      R   P   +  E++LT++R
Sbjct:  128 YKKLPSGVIYADLRVGNGEEAVEGSRANIQWVLRKSNGYFVDSSEVSDGVPFIFTVGDKNGAIAGVDEGIRGMKVGGVRRLLIQPKYAYVTGVEDGKPGPLPVGFGPKQQMRRVMEARKDVPGEYIFLEIQLTRIR 263          
BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Match: A0A7S0CE61_9STRA (Peptidylprolyl isomerase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CE61_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.050e-32
Identity = 63/110 (57.27%), Postives = 75/110 (68.18%), Query Frame = 0
Query:  110 LPSGVQITDIVAGDGPVADAGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAK--RAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQI 217
            LPSGV   D+  GDG V   GK V ++W ++RSNGY + SS      PFI+ VG  K  RAI GLD+GIRGM+ GG RRI++PP L YVEG  DG PGPIP G GPKQ+I
Sbjct:   34 LPSGVSYQDLRLGDGDVVSEGKRVNIQWSLKRSNGYSIDSSSNNDSVPFIFIVGAKKGQRAIAGLDEGIRGMRVGGIRRIIMPPILTYVEGLDDGKPGPIPPGFGPKQRI 143          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIZ9_ECTSI4.140e-15494.89Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YL48_9STRA2.330e-4854.49Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A1Z5JCU4_FISSO1.110e-3651.82Peptidylprolyl isomerase n=1 Tax=Fistulifera solar... [more]
A0A7S4J203_9STRA1.190e-3658.33Peptidylprolyl isomerase n=1 Tax=Odontella aurita ... [more]
B8C0A9_THAPS2.500e-3553.68Peptidylprolyl isomerase n=1 Tax=Thalassiosira pse... [more]
A0A1Z5K3Y4_FISSO5.480e-3551.82Peptidylprolyl isomerase n=1 Tax=Fistulifera solar... [more]
A0A7S2E2F1_9STRA6.360e-3550.00Peptidylprolyl isomerase n=1 Tax=Helicotheca tames... [more]
A0A7S2E4F5_9STRA4.120e-3348.91Peptidylprolyl isomerase n=1 Tax=Helicotheca tames... [more]
A0A6U3UST0_9STRA8.340e-3347.06Peptidylprolyl isomerase n=1 Tax=Ditylum brightwel... [more]
A0A7S0CE61_9STRA1.050e-3257.27Peptidylprolyl isomerase n=1 Tax=Proboscia inermis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.50.40coord: 105..235
e-value: 1.1E-24
score: 88.8
NoneNo IPR availablePANTHERPTHR43811:SF26PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-1, CHLOROPLASTICcoord: 108..234
NoneNo IPR availablePANTHERPTHR43811FAMILY NOT NAMEDcoord: 108..234
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..235
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.483
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 104..234
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 125..231
e-value: 6.1E-14
score: 52.1
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50059FKBP_PPIASEcoord: 130..235
score: 15.273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig107contigE-siliculosus-1a_F_contig107:33731..38456 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig107.498.1mRNA_E-siliculosus-1a_F_contig107.498.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig107 33661..39002 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig107.498.1 ID=prot_E-siliculosus-1a_F_contig107.498.1|Name=mRNA_E-siliculosus-1a_F_contig107.498.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=236bp
MMDRLSFSIFAIAHFVTHAFVPATFPHLGVRRATGLRMRSSPADEGMSRG
QVIRSVAAACVVSSTAWSTAAVGVSAKAPAPVMKLPDADDGVKPALRSGG
EGSIPPFTVLPSGVQITDIVAGDGPVADAGKGVTLKWVMRRSNGYYVSSS
EEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCK
DGNPGPIPMGLGPKQQINTRNKEPLTFEVKLTKVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001179PPIase_FKBP_dom