prot_E-siliculosus-1a_F_contig107.495.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig107.495.1
Unique Nameprot_E-siliculosus-1a_F_contig107.495.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length478
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig107.495.1 vs. uniprot
Match: D7FIZ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ6_ECTSI)

HSP 1 Score: 816 bits (2107), Expect = 1.380e-296
Identity = 438/455 (96.26%), Postives = 445/455 (97.80%), Query Frame = 0
Query:   24 MPAARASSFSLNPWVARNWGLIIAAAVTVATVAFSLGTTASTSRFGAMTGAARVGQQSLYSSPKSRGGISVARAQRPSSIRPHGRVLQED-PTVITPIVEYGTKLQIFMCNPSLEVEGNDAHLVDEASLAAALSNISGIKQADEGDITVTIKTEPVDVDDVSYMCDTDGMLQWHAQVEYSAAYAGSRDTTPAVLAAQANDYVAYSSSQFKALLAGFINAEYAGAAETVELSADDILIPTVGWIVTFPAEESVTQETHTAGSSDGLAMGIGSDSSLWAWWVWLIYALLVACCLXXXXXXXXXXQADEKEAARDRLIATRKGRGEEGLAKIRGPEWGITELDFEGDYDAYQSQEMKREYDGAGKGVEPTAYRPSHRAGQQSVSAQAWMQEAGKKSAWAQSSGNSSRQGGGQSPVVRRFDIDDDDADDGVGKLRSKHPQYSFDVGRGGFNDRDGESKS 477
            MPAARASS SLNPWVARNWGL+IAAA TVATVAFSLGTTASTSR GAMTG+ARVGQQSLY+SPKSRGGISVA+AQRPSS+RPHGRVLQE+ PTVITPIVEYGTKLQIFMCNPSLEVEGNDAHLVDEASLAAALSNISGIKQADEGDITVTIKTEPVDVDDVSYMCDTDGMLQWHAQVEYSAAYAGSRDTTPAVLAAQANDYVAYSSSQFKALLAGFINAEYAG  ETVELSADDILIPTVGWIVTFPAEESVTQETHTAGSSDGLAMGIGSDSSLWAWWVWLIYALLVAC  XXXXXXXXXX ADEKEAARDRLIATRKGRGEEGLAKIRGPEWGITELDFEGDYDAYQSQEMKREYDGAG+GVEPTAYRPSHRAGQQSVSAQAWMQEAGKKSAWAQ SGNSSRQGGGQSPVVRRFDIDDDDADDGVGKLRSKHPQYSFDVGRGGFNDRDGESKS
Sbjct:    1 MPAARASSSSLNPWVARNWGLVIAAAATVATVAFSLGTTASTSRSGAMTGSARVGQQSLYASPKSRGGISVAQAQRPSSVRPHGRVLQEETPTVITPIVEYGTKLQIFMCNPSLEVEGNDAHLVDEASLAAALSNISGIKQADEGDITVTIKTEPVDVDDVSYMCDTDGMLQWHAQVEYSAAYAGSRDTTPAVLAAQANDYVAYSSSQFKALLAGFINAEYAGEVETVELSADDILIPTVGWIVTFPAEESVTQETHTAGSSDGLAMGIGSDSSLWAWWVWLIYALLVACXXXXXXXXXXXXXADEKEAARDRLIATRKGRGEEGLAKIRGPEWGITELDFEGDYDAYQSQEMKREYDGAGRGVEPTAYRPSHRAGQQSVSAQAWMQEAGKKSAWAQPSGNSSRQGGGQSPVVRRFDIDDDDADDGVGKLRSKHPQYSFDVGRGGFNDRDGESKS 455          
BLAST of mRNA_E-siliculosus-1a_F_contig107.495.1 vs. uniprot
Match: A0A835YQ53_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ53_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 3.410e-16
Identity = 99/338 (29.29%), Postives = 143/338 (42.31%), Query Frame = 0
Query:  118 TPIVEYGTKLQIFMCNPSLEVEGNDAHLVDEASLAAALSNISGIKQADEGDITVTIKTEPVDVDDVSYMCDTDGMLQWHAQVEY----------SAAYAGSRDTT-----------PAVLAAQANDYVAYSSSQFKALLAGFINAEYAGAAETVELSA-----DDILIPTVGWIVTFPAEESVTQETHTAGSSDGLAMGIG-SDSSLWAWWVWLIYALLVACCLXXXXXXXXXXQADEKEAARDR--LIATRKGRGEEGLAKIRGPEWGITELDFEGDYDAYQSQEMKREYDGAGKGVEPTAYRPSH------RAGQQSV--SAQAWMQEAGKKSAWA 418
            TPI  Y  +  +F+C     V  ++   V E+ +  A+ ++    +     ++V   T         Y C   G  QW   V Y          +A    + +TT               A++AND+V YS        A F  A YA  A    L A      D+ + + GWI  F + E        A S+  + M +G + + +W  W W+++AL V  C           +A E E   +   L+  RK   EEGL KI G E+GIT LDF+G+Y+ Y+  +M+ EY GA       A R SH       AG  +V  SA AW  E GKKS +A
Sbjct:  113 TPI-SYEAQFNMFICPTQAGVANSNVKAVTESHVRDAVLSLDAFGKPSLDAVSVGFTTYRA-----PYKCAIAGSTQWSVSVVYRDPSYYRRHLTAVATTATNTTLSAGYVDPSSNAVTRASEANDWVTYSFPNNST--ADFRTAFYAAVAAAAGLPAGAITYSDLQVQSSGWIARFSSSEGSVPPGSLAFSTPTM-MSVGIAGNEVWPAWAWVLFALAVLACALPLCMFILKKRAAEFEEEEEGYGLLKLRK---EEGLEKIHGNEFGITNLDFDGNYNDYEEPKMQDEYAGA---TAAAASRASHGHKRMDSAGTSTVDVSATAWSNEKGKKSNFA 435          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig107.495.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIZ6_ECTSI1.380e-29696.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YQ53_9STRA3.410e-1629.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 297..317
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 318..477
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 60..296
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 297..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig107contigE-siliculosus-1a_F_contig107:12573..15371 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig107.495.1mRNA_E-siliculosus-1a_F_contig107.495.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig107 12054..15703 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig107.495.1 ID=prot_E-siliculosus-1a_F_contig107.495.1|Name=mRNA_E-siliculosus-1a_F_contig107.495.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=478bp
MARDELLKRSRRGAAVSARLVRTMPAARASSFSLNPWVARNWGLIIAAAV
TVATVAFSLGTTASTSRFGAMTGAARVGQQSLYSSPKSRGGISVARAQRP
SSIRPHGRVLQEDPTVITPIVEYGTKLQIFMCNPSLEVEGNDAHLVDEAS
LAAALSNISGIKQADEGDITVTIKTEPVDVDDVSYMCDTDGMLQWHAQVE
YSAAYAGSRDTTPAVLAAQANDYVAYSSSQFKALLAGFINAEYAGAAETV
ELSADDILIPTVGWIVTFPAEESVTQETHTAGSSDGLAMGIGSDSSLWAW
WVWLIYALLVACCLVPLCCCLRRRQADEKEAARDRLIATRKGRGEEGLAK
IRGPEWGITELDFEGDYDAYQSQEMKREYDGAGKGVEPTAYRPSHRAGQQ
SVSAQAWMQEAGKKSAWAQSSGNSSRQGGGQSPVVRRFDIDDDDADDGVG
KLRSKHPQYSFDVGRGGFNDRDGESKS*
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