mRNA_E-siliculosus-1a_F_contig1069.491.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1069.491.1 vs. uniprot
Match: D8LRK0_ECTSI (Nucleosome/chromatin assembly factor group n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRK0_ECTSI) HSP 1 Score: 2140 bits (5544), Expect = 0.000e+0 Identity = 1448/2255 (64.21%), Postives = 1486/2255 (65.90%), Query Frame = 1 Query: 7 TNLGEDSLSKEGEAGAATAACKVKVKV--RFTGTSKGVSDEMVQAKDVLRVTEKTMQLKKEYEARKGKGPKLSGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXATVTDSLAGVNSSSLMPRATIEAAXXXXXXXXXXSGLSDSGKRTPGGLMLSRPSPLPFXXXXXXXXXXXSGLAVGSTVPVERAASPDGSKRSRDSXXXXXXXXXXXXXXGSTEANPWSGDVMRSARGGCDIDRGRRPGEEQEQQLQPPSFQDMVVEALHALSDSRGSSKLATVKWLKSSSRYGWMAAPPDEAKFKANVAAGVKQALEEGKVVQVRTNYRISPDHARALNLGLPAKPNKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTTATEMTVVSARVENPHTNTGADDDSSAPGPAPDATPEASSTISGCSEPXXXXXXXXXXXXXXXXXXXXXXXAPSHGVKEAVTEE-GTGGLAWAAGEEPKPKTIKRPTGRSKGRTPKTIDGXXXXXXXXXXXVSKGSSTSRSQALDLVEDDVLHAREQEAQTGDGATAEPPLRSPRPTPVNRLRVPAGAVGDLLTVWDFLKTFGHELNLKEASVLTLEEFETVVLWSSNNNKRKKSVHPLIAGLHLALLREALGRKVDGSPCGEAEAVTTSMAPVRRILGDLLNPATWPEVLRRFAMAFLRYSRALFSRHGRGRGEWVDEGHPLATAVETLSRRGYGDLSSSETLCVLRWLSDVLMDSCSVRAKIAQHAERQSRVTAGDRKKAEERDHLVAESLSRSLAHRGRVDETAIGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAVVGGDAAGTAASGTPLTLEEKEALVSARAEEKRSAVRREALGWDREFNRYWWFGGGPSEVIHVEEKGGDVWGQYRSQQEVDALMDSQHPRGKRGAPLRRRLCQSKDEMQVGFERVRLVDAAEEAERKAREDIEQERFRQLAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAKSAAVSMTTAPPPVGALEHRAQGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQPYVPLLPAWRHVARRGDRDFLRNLKLELTSLEEQVAPLGNTTVTGRHSKDRHGWVREVATARDALALRRPAVQLEGALYACSRDMMENLAMDWSSMAVAEGEDVSWDSPYDWTFLKSPGRDRRKGKDREQRASLGEDGRAAPSATVGSGSAAVGGGGPTAAAVGASARTPSRGKRNVAMKRESGRELTSPAAAQAAAAKAAVSPAAPALTGRGRQEGEGTREGTQGACKMGREEVVEEARVFAARDSAVAGANSLAEALVPGGKAPPEESSAGCLPSAARVHFQDEDDAEKVTEKADSQPPAADTPVNEATPATGDKQDAATSTTNMARLGGLQASHSAQGGAYSTPLEGKVGVARPASSSEQATAQDGGEEGLNANSXXXXXXXXXXXXXXXXXXXXXDAEGSSVDTSDTITATGRTVASESKATTPAVATRASEEXXXXXXXXXXXXRKAGKTDISGDSSGGLKGGGVVGPAGVDDEEGRTRLKEGADDRTATDAGGSISHPPEAASAGHAADSVASEASSGPMEVEGGGVELEKNSGTMKTAVVEEWRK--PA-VSDDVNGDKTPVLDGKMEATPAAGDDTGPDAAFLVKDAAGAPAVATVAAAXXXXXXXXXXXXGGNKGDGGNPSKTAGVDLVEKTKPSGTQDDNDDGDDDAKVPASVEGMQEGGRRDAGAGEQQVEEDNAVPAAAVTXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTATIKTKAEADDAGLTEHNEMDGMDXXXXXXXXXXXXXXXVEPGKRWEMEREGIALGNLSAELQGALSTDPAFREAWRQEMLAARTLAGVATLVHSLLASAAGVLPALQEQDMQEQALINQDLATNQALHVRCSSTSEIVWARLHGFPWWPALVVKPEGAGFQRSLLEAGDRLVVFMNEHQQFRVNHRFCKPYVGTTKHDDVMRRASRNNRRMARAIKMATKGLQVAHERFGSDGDPNAPHNRPNFDTQDTQQQQPAADADAAPPAAGTRLTGSATVAPXXXXXXXXXXXXTATTHRSVPPGQAAQRGLALAXXXXXXXXXXXAAGGETVKVSRPRRTPKVPKYLTEGMVGDGDADAPVRSIAGKGKKRKDGRVGGSTGMWQARKSHKRGGXXXXSELEQHQPAAPAERQPSRKKMPTALAQAAVASGSMNM 6753
TNL EDS KEGE RFTGTSKG SDEMVQAKDVLRVTEKTMQLKKEYEARKGKG K SG G G K P + PS G+ VGSTVPVERAASPDGSK+SRDS GSTEA+ WSGDVMRSARGGCD D RRPGEEQE+QLQPPSF DMVVEALHALSDSRGSSKLATVKWLKSSSRYGWMAAPPDEAKFKANVAAGVKQALEEGKVVQVRTNYRISPDHARAL+LGLP KPNKRXXXXXXXXXXX +PD T + EAVTEE GTG LAWAAGEEPKPK IKRPTGRSKGR PKTIDGXXXXXXXXXXX KGSS SRSQALDLVEDDVLHAREQE QTG GATAEPPLR RPTP+NRLRV AGAVGDL+TVWDFLKTFG ELNLKEASVLTLEEFET VLWSS+NNK KKSVHPLIAGLHLALLREALGRK DGSPCGEAEAV TSMAPVRRILGDLLNPATWPEV+RRFAMA+LRYSRALFSRHGRGRGEWVDEGHPLATAVETLSRRGYGDLSSSETLCVLRWLSDVLMDS SVR KIAQHAERQSR T GDRKKAEERDHLVAESLSRSLAHRG VDETAIG XXXXXXXXXXXX ASAVVGGD AGTAASGTPLTL+EKEALVSARAEEKRSAVRREALGWDREFNRYWWFGGGPSEVIHVEEKGGDVWGQYRSQQEVDALMDSQHPRGKRGAPLRRRLCQSKDEMQVGFERVRLVDAAEEAERK REDIEQE RQLA XXXXXXXXXXXXXXXXXXXXXXX P K AAVS T A PPVGALEHR QGS AAQPYVPLLPAWRHVARRGDRDFLRNLKLELTSLEEQVAPLGNTTVTGRHSKDRHGWVREVATARD LALRRPAVQLE ALYACSRDMMENLAMDWSSMAVAEGEDVSWDSPYDWTFLKS GRDRRKGKDREQRASLGEDGRAAPSATVGSGSAA+GGGGPTAA VGASAR PSRGKRNVA KRESGRELTSPAAAQA A A GRGRQEGEGTREG QGA K+ REEV+EEARVFAA DSA AG NSLAE LVPGGKAPPEESSAGCLPSA RV FQDEDDA+K ATTPAVATRAS+E XXXXXXXXXX GVDDE+ RTRLKEGADDRTATDAGGSISHPPEAA G AAD+VASEA+SGPMEVEGGGVELE+NSGTMKTA VE+ R+ PA +SDD NGDKTPVLDG+ EATP AG DTGP+AAF V+DAAGA A +T A GGN+GDGGNPSKTA V V G +KT T TKAEADDAGLTE NEMDGMD XXXXXXXXX VEP KRWEMEREGIAL NLSAELQGALSTDPAFREAWR+EMLAARTLAGVATLV+SLL SAAGVLPALQEQDMQEQALINQDLATNQAL VRCSSTSEIVWARLHGFPWWPALVVKPEG GFQ MATKGL+VAHERFGSDGDPNAPHNRPNFDTQDTQ AAGTRLTGSA XXXXXXXXXXXX AT+HRSVPPGQAAQRGLALA XXXXXXXXXXAAGGET KVSRPRRTPKVPKYLTEGMVGDG ADAPVRSIAGKGKKRKDGRVGGSTGMWQARKS KRG XXXXSELEQHQPAAPAERQPSRKKMP ALAQA +ASGSM+M
Sbjct: 5 TNLVEDSDPKEGEXXXXXXXXXXXXXXXXRFTGTSKGASDEMVQAKDVLRVTEKTMQLKKEYEARKGKGHKPSGTGR-------------------------------------------------------------GRPPEKKPAP-----TEPS--------TAAAAHGGGVTVGSTVPVERAASPDGSKKSRDSSSASDVDGGVGGGNGSTEASSWSGDVMRSARGGCDSDSSRRPGEEQEEQLQPPSFPDMVVEALHALSDSRGSSKLATVKWLKSSSRYGWMAAPPDEAKFKANVAAGVKQALEEGKVVQVRTNYRISPDHARALSLGLPTKPNKRXXXXXXXXXXX--------------------------------------------------------------------------------------------SPDPTRD-----------------------------------------EAVTEEEGTGELAWAAGEEPKPKAIKRPTGRSKGRAPKTIDGXXXXXXXXXXXXXKGSSASRSQALDLVEDDVLHAREQETQTGGGATAEPPLRPARPTPINRLRVSAGAVGDLVTVWDFLKTFGQELNLKEASVLTLEEFETAVLWSSSNNKSKKSVHPLIAGLHLALLREALGRKADGSPCGEAEAVMTSMAPVRRILGDLLNPATWPEVIRRFAMAYLRYSRALFSRHGRGRGEWVDEGHPLATAVETLSRRGYGDLSSSETLCVLRWLSDVLMDSRSVRVKIAQHAERQSRATVGDRKKAEERDHLVAESLSRSLAHRGMVDETAIGXXXXXXXXXXXXXKPEGNERVAEERIEQAASAVVGGDTAGTAASGTPLTLKEKEALVSARAEEKRSAVRREALGWDREFNRYWWFGGGPSEVIHVEEKGGDVWGQYRSQQEVDALMDSQHPRGKRGAPLRRRLCQSKDEMQVGFERVRLVDAAEEAERKVREDIEQEHLRQLAAVXXXXXXXXXXXXXXXXXXXXXXXGDSSTRRSSRKRPGPSSPGKFAAVSTTIASPPVGALEHRTQGSNGNSNSSSGRMEAARAAAEAE------------AAQPYVPLLPAWRHVARRGDRDFLRNLKLELTSLEEQVAPLGNTTVTGRHSKDRHGWVREVATARDVLALRRPAVQLERALYACSRDMMENLAMDWSSMAVAEGEDVSWDSPYDWTFLKSQGRDRRKGKDREQRASLGEDGRAAPSATVGSGSAAIGGGGPTAAEVGASARAPSRGKRNVAKKRESGRELTSPAAAQAXXXXXXXXXXAAAFMGRGRQEGEGTREGAQGARKVAREEVIEEARVFAAGDSAGAGVNSLAELLVPGGKAPPEESSAGCLPSAGRVVFQDEDDAQK-------------------------------------------------------------------------------------------------------------------------------------ATTPAVATRASDEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVDDEKDRTRLKEGADDRTATDAGGSISHPPEAAGGGSAADNVASEANSGPMEVEGGGVELERNSGTMKTAAVEDSREGEPAGMSDDGNGDKTPVLDGQTEATPDAGGDTGPNAAFPVEDAAGA-AASTPA------------DSGGNEGDGGNPSKTA-------------------------VALGVGG---------------------------------------------------DGSTKKTPTTMTKAEADDAGLTEGNEMDGMDEAAEEXXXXXXXXX-VEPEKRWEMEREGIALANLSAELQGALSTDPAFREAWRKEMLAARTLAGVATLVYSLLTSAAGVLPALQEQDMQEQALINQDLATNQALRVRCSSTSEIVWARLHGFPWWPALVVKPEGVGFQ-------------------------------------------------------MATKGLRVAHERFGSDGDPNAPHNRPNFDTQDTQXXXXXXXXXXXXXAAGTRLTGSAXXXXXXXXXXXXXXXXPATSHRSVPPGQAAQRGLALAAXXXXXXXXXXAAGGETGKVSRPRRTPKVPKYLTEGMVGDGGADAPVRSIAGKGKKRKDGRVGGSTGMWQARKSQKRGXXXXXSELEQHQPAAPAERQPSRKKMPAALAQAELASGSMSM 1762
BLAST of mRNA_E-siliculosus-1a_F_contig1069.491.1 vs. uniprot
Match: A0A6H5JEA8_9PHAE (PWWP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA8_9PHAE) HSP 1 Score: 1313 bits (3397), Expect = 0.000e+0 Identity = 869/1127 (77.11%), Postives = 896/1127 (79.50%), Query Frame = 1 Query: 3403 VAPLGNTTVTGRHSKDRHGWVREVATARDALALRRPAVQLEGALYACSRDMMENLAMDWSSMAVAEGEDVSWDSPYDWTFLKSPGRDRRKGKDREQRASLGEDGRAAPSATVGSGSAAVGGGGPTAAAVGASARTPSRGKRNVAMKRESGRELTSPAAAQAAAAKAAVSPAAPALTGRGRQEGEGTREGTQGACKMGREEVVEEARVFAARDSAVAGANSLAEALVPGGKAPPEESSAGCLPSAARVHFQDEDDAEKVTEKADSQPPAADTPVNEATPATGDKQDAATSTTNMARLGGLQASHSAQGGAYSTPLEGKVGVARPASSSEQATAQDGGEEGLNANSXXXXXXXXXXXXXXXXXXXXXDAEGSSVDTSDTITATGRTVASESKATTPAVATRASEEXXXXXXXXXXXXRKAGKTDISGDSSGGLKGGGVVGPAGVDDEEGRTRLKEGADDRTATDAGGSISHPPEAASAGHAADSVASEASSGPMEVEGGGVELEKNSGTMKTAVVEEWRKPA-VSDDVNGDKTPVLDGKMEATPAAGDDTGPDAAFLVKDAAGAPAVATVAAAXXXXXXXXXXXXGGNKGDGG-----NPSKTAGVDLVEKTKPSGTQDDNDDGDDDAKVPASVEGMQEGGRRDAGAGEQQVEEDNAVPAAAVTXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTATIKTKAEADDAGLTEHNEMDGMDXXXXXXXXXXXXXXXVEPGKRWEMEREGIALGNLSAELQGALSTDPAFREAWRQEMLAARTLAGVATLVHSLLASAAGVLPALQEQDMQEQALINQDLATNQALHVRCSSTSEIVWARLHGFPWWPALVVKPEGAGFQRSLLEAGDRLVVFMNEHQQFRVNHRFCKPYVGTTKHDDVMRRASRNNRRMARAIKMATKGLQVAHERFGSDGDPNAPHNRPNFDTQDTQQQQPAADADAAPP-AAGTRLTGSATVAPXXXXXXXXXXXXTATTHRSVPPGQAAQRGLALAXXXXXXXXXXXAAGG---ETVKVSRPRRTPKVPKYLTEGMVGDGDADAPVRSIAGKGKKRKDGRVGGSTGMWQARKSHKRGGXXXXSELEQHQPAAPAERQPSRKKMPTALAQAAVASGSMNM 6753
VAPLGNTTVTGRHSKDRHGWVREVATARDALALRRPAVQLE AL RDMME+LA+DWSSMAVAEGEDVSWDSPYDWTFLK GRDRRKGKDREQRAS GEDGRAA SATVGSG AAVGG GPTAAAVGA+AR PSRGKR VA KRE GRELTSPAAAQA VSPAA ALTGRGRQEGE REGTQGA KM REEV EEARVFAA D A AGANSLAE LVP G+A PEESSAGCLPSAARV F D DDAEKVTEKADSQPP ADTP NEAT TGDKQDAATSTTN ARLGGLQAS SAQ AYSTPLEGKVGV RPASSSE+ATA+DGGE GLNA++ XXXXXXXXXXXXXXXXXX DAEGSSV TSDT TATGRTVASE KATTPAVATRASEE KAGKTDISG+ GG +GGGV+GPAGVDDE+ TRLKE ADD TATDAGGSISHP EAA G AA +VASEASSGPMEVEGGGVELEK S TMK A VEE R+ A +SDD NGDKTPVLDG+ EATPAAGDDTGPD AF +K AAGA AVA XXXXXXXXXXXX N SKTAGVD EKTKPSGTQDD+DDGDDDA+VP VEGMQEGGRRD GAGEQQVE DNAV AAV +K TKAEAD AGLTE N XXXXVEP KRWEMEREGIAL NLSA LQGALSTDPAFREAWRQEMLAARTLAGVATLV+SLLASAAGVLPALQEQDMQEQALINQ ALHVRCSSTSEIVWARLHGFPWWPALVVKPEG GFQRSLLEAGDRLVVFMNE Q FRVNHRFCKPYVGTTKHD VMRRASRNNRRMARAIKMATKGL+VAHERFGSDGDPNAPHNRPNFDTQDTQ AAG RLTGSAT AP XXXXXXXXXX TTHR VPPGQAAQRGLALAXXXXXXXXXXX AGG ETV VSRPRRTPK PKYL EGMVG+G ADAPVRSIAGKGK DGRVGGS+G+W+A KS KRG XXXX ERQPSRKKM TALAQA +ASGSMNM
Sbjct: 8 VAPLGNTTVTGRHSKDRHGWVREVATARDALALRRPAVQLERAL----RDMMESLAIDWSSMAVAEGEDVSWDSPYDWTFLKLQGRDRRKGKDREQRASSGEDGRAALSATVGSGIAAVGGWGPTAAAVGAAARAPSRGKRKVAKKREGGRELTSPAAAQAXXXXXXVSPAAAALTGRGRQEGESIREGTQGASKMAREEVAEEARVFAAGDIAGAGANSLAELLVPVGEASPEESSAGCLPSAARVAFHDGDDAEKVTEKADSQPPTADTPANEATQVTGDKQDAATSTTNTARLGGLQASDSAQLSAYSTPLEGKVGVVRPASSSEKATARDGGE-GLNASNAXXXXXXXXXXXXXXXXXX--DAEGSSVGTSDTSTATGRTVASEPKATTPAVATRASEEAKEVRALNKVKEEKAGKTDISGERMGGFRGGGVIGPAGVDDEKDCTRLKEEADDGTATDAGGSISHPREAAGGGSAAGNVASEASSGPMEVEGGGVELEKGSATMKMAAVEESREQAGMSDDGNGDKTPVLDGQTEATPAAGDDTGPDDAFFLKGAAGAAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTSKTAGVDRFEKTKPSGTQDDSDDGDDDAEVPEIVEGMQEGGRRDPGAGEQQVEADNAVATAAVAAATVALSVAGDGST-------------KKPTMTMTKAEADHAGLTEGNVSLKRVDLEPRYEEDEEXXXXVEPEKRWEMEREGIALANLSAGLQGALSTDPAFREAWRQEMLAARTLAGVATLVYSLLASAAGVLPALQEQDMQEQALINQ------ALHVRCSSTSEIVWARLHGFPWWPALVVKPEGVGFQRSLLEAGDRLVVFMNEQQHFRVNHRFCKPYVGTTKHDGVMRRASRNNRRMARAIKMATKGLRVAHERFGSDGDPNAPHNRPNFDTQDTQXXXXXXXXXXXXALAAGERLTGSATAAPPAXXXXXXXXXXXXTTHRLVPPGQAAQRGLALAXXXXXXXXXXXXAGGRRGETVMVSRPRRTPKPPKYLIEGMVGNGGADAPVRSIAGKGK---DGRVGGSSGVWRASKSQKRGXXXXXXXXXXXXXXXXXERQPSRKKMLTALAQAELASGSMNM 1105
BLAST of mRNA_E-siliculosus-1a_F_contig1069.491.1 vs. uniprot
Match: A0A6H5JBK5_9PHAE (WHIM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBK5_9PHAE) HSP 1 Score: 624 bits (1609), Expect = 4.900e-200 Identity = 407/671 (60.66%), Postives = 415/671 (61.85%), Query Frame = 1 Query: 454 MLSRPSPLPFXXXXXXXXXXXSGLAVGSTVPVERAASPDGSKRSRDSXXXXXXXXXXXXXX---GSTEANPWSGDVMRSARGGCDIDRGRRPGEEQEQQLQPPSFQDMVVEALHALSDSRGSSKLATVKWLKSSSRYGWMAAPPDEAKFKANVAAGVKQALEE-GKVVQVRTNYRISPDHARALNLGLPAKPNKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTTATEMTVVSARVENPHTNTGADDDSSAPGPAPDATPEASSTISGCSEPXXXXXXXXXXXXXXXXXXXXXXXAPSHGVKEAVTEE-GTGGLAWAAGEEPKPKTIKRPTGRSKGRTPKTIDGXXXXXXXXXXXVSKGSSTSRSQALDLVEDDVLHAREQEAQTGDGATAEPPLRSPRPTPVNRLRVPAGAVGDLLTVWDFLKTFGHELNLKEASVLTLEEFETVVLWSSNNN-KRKKSVHPLIAGLHLALLREALGRKVDGSPCGEAEAVTTSMAPVRRILGDLLNPATWPEVLRRFAMAFLRYSRALFSRHGRGRGEWVDEGHPLATAVETLSRRGYGDLSSSETLCVLRWLSDVLMDSCSVRAKIAQHAERQSRVTAGDRKKAEERDHLVAESLSRSLAHRGR 2448
MLSRPSPLPF SGL +GSTVPVERAASPDG KRSRDS XXXXXXXXXXX GSTEANPWSGDVMRSARG CD D RRPGEEQEQQLQPPSF DMVVEALHALSDSRGSSKLATVKWLKSSSRYGWMAAPPDEAKFKANVAAGVKQ G +V + + G D APSHGVKE VTEE GTG LAWAAGEEPKP IKRPTGRSKGRTPKTIDG XXXXX KGS SRSQALDLVED VLHAREQEAQTGDGATAEPPLR PRPTPVNRLRVPAGAVGDLLTVWDFLK EL+LKE SVLTLEEFET VLWSSNN + KKSVHPLIA HL + APVRRILGDLLNPATWPEVLRRFAMA+LRYSRALFSRHGRGRGE VDEGHPLATAVETLSRRG GDLSSSETLCVLRWLSDVLMDS SVRAKIAQHAE QSRVTA DRKKAEERDHLVAESLS SLAHRGR
Sbjct: 1 MLSRPSPLPFASASATTAKSKSGLTIGSTVPVERAASPDGGKRSRDSSSAXXXXXXXXXXXXXNGSTEANPWSGDVMRSARGSCDGDSSRRPGEEQEQQLQPPSFPDMVVEALHALSDSRGSSKLATVKWLKSSSRYGWMAAPPDEAKFKANVAAGVKQVGRWFGGIV-------------------------------------------------------------------------------------------------------------------YCDGGGD----------------------------------------------GGGAPSHGVKETVTEEEGTGELAWAAGEEPKPNAIKRPTGRSKGRTPKTIDGGGFSNSXXXXXXPKGSRVSRSQALDLVEDGVLHAREQEAQTGDGATAEPPLRPPRPTPVNRLRVPAGAVGDLLTVWDFLK----ELHLKEPSVLTLEEFETAVLWSSNNTFESKKSVHPLIAEFHLDM-----------------------QAPVRRILGDLLNPATWPEVLRRFAMAYLRYSRALFSRHGRGRGEGVDEGHPLATAVETLSRRGCGDLSSSETLCVLRWLSDVLMDSRSVRAKIAQHAELQSRVTARDRKKAEERDHLVAESLSLSLAHRGR 483
BLAST of mRNA_E-siliculosus-1a_F_contig1069.491.1 vs. uniprot
Match: A0A6H5KS71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS71_9PHAE) HSP 1 Score: 166 bits (419), Expect = 5.660e-42 Identity = 174/278 (62.59%), Postives = 176/278 (63.31%), Query Frame = 1 Query: 2698 REFNRYWWFGGGPSEVIHVEEKGGDVWGQYRSQQEVDALMDSQHPRGKRGAPLRRRLCQ-----------------------SKDEMQVGFERVRLVDAAEEAERKAREDIEQERFRQLAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPA-------------------KSAAVSMTTAPPPVGALEHRAQGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQPYVPLLPAWRHVARRGDRDFLRNLKLELTSLEEQV 3405
REFN YWWFGGG SE EVDALMDSQHP+GKRGAPLRRRLCQ SKDEMQVGFERVRLVDAAEEAERKA+EDIEQER RQLAEAXXXXXXXXXXXXXXXXXXX P KS AV MTTA PVGALE RAQGS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VPLLPAWRHVARR DR FLRNLKLEL SLEEQ
Sbjct: 3 REFNNYWWFGGGRSE-------------------EVDALMDSQHPQGKRGAPLRRRLCQGGYISISNRNAAFQSPSSINLSKSKDEMQVGFERVRLVDAAEEAERKAQEDIEQERLRQLAEAXXXXXXXXXXXXXXXXXXXRGVNGDSSTRRSSRKRPGPSSPVRCSCENVNVFAGVGFDASGKSVAVRMTTADLPVGALERRAQGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------VPLLPAWRHVARREDRGFLRNLKLELISLEEQA 255
BLAST of mRNA_E-siliculosus-1a_F_contig1069.491.1 vs. uniprot
Match: A0A7S2BI97_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BI97_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 7.520e-9 Identity = 42/135 (31.11%), Postives = 67/135 (49.63%), Query Frame = 1 Query: 5770 LPALQEQDMQEQALINQ-------DLATNQALHVRCSSTSEIVWARLHGFPWWPALVVKPEGAGFQRSLLEAGDRLVVFMNEHQQFRVNHRFCKPYVGTTKHDDVMRRASRNNRRMARAIKMATKGLQVAHERFG 6153
LP L+EQ A +N A + ++ V TSE+VWAR+ G+PWWP+ V +P F +++ E + LVVF+ E Q+ + P+ G + D M + R+ +R R T+ +Q E+ G
Sbjct: 3 LPDLEEQAANALAFLNDANAYGEDGRAIDPSVRVSSEPTSEMVWARVKGYPWWPSRVHRPRDPKFSQAMSERNEILVVFVGEAAQYHLPLEDTAPFTGDEQ-DSHMPKKDRHIQRSLRLAIHTTRMIQAHEEKTG 136
BLAST of mRNA_E-siliculosus-1a_F_contig1069.491.1 vs. uniprot
Match: A0A7S3JYV4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYV4_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 5.600e-5 Identity = 31/88 (35.23%), Postives = 47/88 (53.41%), Query Frame = 1 Query: 5875 VWARLHGFPWWPALVVKPEGAGFQRSLLEAGDRLVVFMNEHQQFRVNHRFCKPYVGTTKHDDVMRRASRNNRRMARAIKMATKGLQVA 6138
VWAR+ G+PWWPA P+ F ++L +L+VF+NE + ++ +P+ G DD RM ++IK KGLQ+A
Sbjct: 1098 VWARIRGYPWWPAREYIPKSPHFAQALERRNHKLLVFVNESVMYLIDSNSVEPFTGLP--DDP---------RMPKSIKQCAKGLQLA 1174 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1069.491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 6 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1069.491.1 >prot_E-siliculosus-1a_F_contig1069.491.1 ID=prot_E-siliculosus-1a_F_contig1069.491.1|Name=mRNA_E-siliculosus-1a_F_contig1069.491.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=2418bp SQTNLGEDSLSKEGEAGAATAACKVKVKVRFTGTSKGVSDEMVQAKDVLRback to top mRNA from alignment at E-siliculosus-1a_F_contig1069:18139..37012- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1069.491.1 ID=mRNA_E-siliculosus-1a_F_contig1069.491.1|Name=mRNA_E-siliculosus-1a_F_contig1069.491.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=18874bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1069:18139..37012- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1069:18139..37012- >mRNA_E-siliculosus-1a_F_contig1069.491.1 ID=mRNA_E-siliculosus-1a_F_contig1069.491.1|Name=mRNA_E-siliculosus-1a_F_contig1069.491.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=14508bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1069:18139..37012- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |