mRNA_E-siliculosus-1a_F_contig1069.491.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1069.491.1 vs. uniprot
Match: D8LRK0_ECTSI (Nucleosome/chromatin assembly factor group n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRK0_ECTSI) HSP 1 Score: 2140 bits (5544), Expect = 0.000e+0 Identity = 1448/2255 (64.21%), Postives = 1486/2255 (65.90%), Query Frame = 1
Query: 7 TNLGEDSLSKEGEAGAATAACKVKVKV--RFTGTSKGVSDEMVQAKDVLRVTEKTMQLKKEYEARKGKGPKLSGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXATVTDSLAGVNSSSLMPRATIEAAXXXXXXXXXXSGLSDSGKRTPGGLMLSRPSPLPFXXXXXXXXXXXSGLAVGSTVPVERAASPDGSKRSRDSXXXXXXXXXXXXXXGSTEANPWSGDVMRSARGGCDIDRGRRPGEEQEQQLQPPSFQDMVVEALHALSDSRGSSKLATVKWLKSSSRYGWMAAPPDEAKFKANVAAGVKQALEEGKVVQVRTNYRISPDHARALNLGLPAKPNKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTTATEMTVVSARVENPHTNTGADDDSSAPGPAPDATPEASSTISGCSEPXXXXXXXXXXXXXXXXXXXXXXXAPSHGVKEAVTEE-GTGGLAWAAGEEPKPKTIKRPTGRSKGRTPKTIDGXXXXXXXXXXXVSKGSSTSRSQALDLVEDDVLHAREQEAQTGDGATAEPPLRSPRPTPVNRLRVPAGAVGDLLTVWDFLKTFGHELNLKEASVLTLEEFETVVLWSSNNNKRKKSVHPLIAGLHLALLREALGRKVDGSPCGEAEAVTTSMAPVRRILGDLLNPATWPEVLRRFAMAFLRYSRALFSRHGRGRGEWVDEGHPLATAVETLSRRGYGDLSSSETLCVLRWLSDVLMDSCSVRAKIAQHAERQSRVTAGDRKKAEERDHLVAESLSRSLAHRGRVDETAIGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAVVGGDAAGTAASGTPLTLEEKEALVSARAEEKRSAVRREALGWDREFNRYWWFGGGPSEVIHVEEKGGDVWGQYRSQQEVDALMDSQHPRGKRGAPLRRRLCQSKDEMQVGFERVRLVDAAEEAERKAREDIEQERFRQLAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAKSAAVSMTTAPPPVGALEHRAQGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQPYVPLLPAWRHVARRGDRDFLRNLKLELTSLEEQVAPLGNTTVTGRHSKDRHGWVREVATARDALALRRPAVQLEGALYACSRDMMENLAMDWSSMAVAEGEDVSWDSPYDWTFLKSPGRDRRKGKDREQRASLGEDGRAAPSATVGSGSAAVGGGGPTAAAVGASARTPSRGKRNVAMKRESGRELTSPAAAQAAAAKAAVSPAAPALTGRGRQEGEGTREGTQGACKMGREEVVEEARVFAARDSAVAGANSLAEALVPGGKAPPEESSAGCLPSAARVHFQDEDDAEKVTEKADSQPPAADTPVNEATPATGDKQDAATSTTNMARLGGLQASHSAQGGAYSTPLEGKVGVARPASSSEQATAQDGGEEGLNANSXXXXXXXXXXXXXXXXXXXXXDAEGSSVDTSDTITATGRTVASESKATTPAVATRASEEXXXXXXXXXXXXRKAGKTDISGDSSGGLKGGGVVGPAGVDDEEGRTRLKEGADDRTATDAGGSISHPPEAASAGHAADSVASEASSGPMEVEGGGVELEKNSGTMKTAVVEEWRK--PA-VSDDVNGDKTPVLDGKMEATPAAGDDTGPDAAFLVKDAAGAPAVATVAAAXXXXXXXXXXXXGGNKGDGGNPSKTAGVDLVEKTKPSGTQDDNDDGDDDAKVPASVEGMQEGGRRDAGAGEQQVEEDNAVPAAAVTXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTATIKTKAEADDAGLTEHNEMDGMDXXXXXXXXXXXXXXXVEPGKRWEMEREGIALGNLSAELQGALSTDPAFREAWRQEMLAARTLAGVATLVHSLLASAAGVLPALQEQDMQEQALINQDLATNQALHVRCSSTSEIVWARLHGFPWWPALVVKPEGAGFQRSLLEAGDRLVVFMNEHQQFRVNHRFCKPYVGTTKHDDVMRRASRNNRRMARAIKMATKGLQVAHERFGSDGDPNAPHNRPNFDTQDTQQQQPAADADAAPPAAGTRLTGSATVAPXXXXXXXXXXXXTATTHRSVPPGQAAQRGLALAXXXXXXXXXXXAAGGETVKVSRPRRTPKVPKYLTEGMVGDGDADAPVRSIAGKGKKRKDGRVGGSTGMWQARKSHKRGGXXXXSELEQHQPAAPAERQPSRKKMPTALAQAAVASGSMNM 6753
TNL EDS KEGE RFTGTSKG SDEMVQAKDVLRVTEKTMQLKKEYEARKGKG K SG G G K P + PS G+ VGSTVPVERAASPDGSK+SRDS GSTEA+ WSGDVMRSARGGCD D RRPGEEQE+QLQPPSF DMVVEALHALSDSRGSSKLATVKWLKSSSRYGWMAAPPDEAKFKANVAAGVKQALEEGKVVQVRTNYRISPDHARAL+LGLP KPNKRXXXXXXXXXXX +PD T + EAVTEE GTG LAWAAGEEPKPK IKRPTGRSKGR PKTIDGXXXXXXXXXXX KGSS SRSQALDLVEDDVLHAREQE QTG GATAEPPLR RPTP+NRLRV AGAVGDL+TVWDFLKTFG ELNLKEASVLTLEEFET VLWSS+NNK KKSVHPLIAGLHLALLREALGRK DGSPCGEAEAV TSMAPVRRILGDLLNPATWPEV+RRFAMA+LRYSRALFSRHGRGRGEWVDEGHPLATAVETLSRRGYGDLSSSETLCVLRWLSDVLMDS SVR KIAQHAERQSR T GDRKKAEERDHLVAESLSRSLAHRG VDETAIG XXXXXXXXXXXX ASAVVGGD AGTAASGTPLTL+EKEALVSARAEEKRSAVRREALGWDREFNRYWWFGGGPSEVIHVEEKGGDVWGQYRSQQEVDALMDSQHPRGKRGAPLRRRLCQSKDEMQVGFERVRLVDAAEEAERK REDIEQE RQLA XXXXXXXXXXXXXXXXXXXXXXX P K AAVS T A PPVGALEHR QGS AAQPYVPLLPAWRHVARRGDRDFLRNLKLELTSLEEQVAPLGNTTVTGRHSKDRHGWVREVATARD LALRRPAVQLE ALYACSRDMMENLAMDWSSMAVAEGEDVSWDSPYDWTFLKS GRDRRKGKDREQRASLGEDGRAAPSATVGSGSAA+GGGGPTAA VGASAR PSRGKRNVA KRESGRELTSPAAAQA A A GRGRQEGEGTREG QGA K+ REEV+EEARVFAA DSA AG NSLAE LVPGGKAPPEESSAGCLPSA RV FQDEDDA+K ATTPAVATRAS+E XXXXXXXXXX GVDDE+ RTRLKEGADDRTATDAGGSISHPPEAA G AAD+VASEA+SGPMEVEGGGVELE+NSGTMKTA VE+ R+ PA +SDD NGDKTPVLDG+ EATP AG DTGP+AAF V+DAAGA A +T A GGN+GDGGNPSKTA V V G +KT T TKAEADDAGLTE NEMDGMD XXXXXXXXX VEP KRWEMEREGIAL NLSAELQGALSTDPAFREAWR+EMLAARTLAGVATLV+SLL SAAGVLPALQEQDMQEQALINQDLATNQAL VRCSSTSEIVWARLHGFPWWPALVVKPEG GFQ MATKGL+VAHERFGSDGDPNAPHNRPNFDTQDTQ AAGTRLTGSA XXXXXXXXXXXX AT+HRSVPPGQAAQRGLALA XXXXXXXXXXAAGGET KVSRPRRTPKVPKYLTEGMVGDG ADAPVRSIAGKGKKRKDGRVGGSTGMWQARKS KRG XXXXSELEQHQPAAPAERQPSRKKMP ALAQA +ASGSM+M
Sbjct: 5 TNLVEDSDPKEGEXXXXXXXXXXXXXXXXRFTGTSKGASDEMVQAKDVLRVTEKTMQLKKEYEARKGKGHKPSGTGR-------------------------------------------------------------GRPPEKKPAP-----TEPS--------TAAAAHGGGVTVGSTVPVERAASPDGSKKSRDSSSASDVDGGVGGGNGSTEASSWSGDVMRSARGGCDSDSSRRPGEEQEEQLQPPSFPDMVVEALHALSDSRGSSKLATVKWLKSSSRYGWMAAPPDEAKFKANVAAGVKQALEEGKVVQVRTNYRISPDHARALSLGLPTKPNKRXXXXXXXXXXX--------------------------------------------------------------------------------------------SPDPTRD-----------------------------------------EAVTEEEGTGELAWAAGEEPKPKAIKRPTGRSKGRAPKTIDGXXXXXXXXXXXXXKGSSASRSQALDLVEDDVLHAREQETQTGGGATAEPPLRPARPTPINRLRVSAGAVGDLVTVWDFLKTFGQELNLKEASVLTLEEFETAVLWSSSNNKSKKSVHPLIAGLHLALLREALGRKADGSPCGEAEAVMTSMAPVRRILGDLLNPATWPEVIRRFAMAYLRYSRALFSRHGRGRGEWVDEGHPLATAVETLSRRGYGDLSSSETLCVLRWLSDVLMDSRSVRVKIAQHAERQSRATVGDRKKAEERDHLVAESLSRSLAHRGMVDETAIGXXXXXXXXXXXXXKPEGNERVAEERIEQAASAVVGGDTAGTAASGTPLTLKEKEALVSARAEEKRSAVRREALGWDREFNRYWWFGGGPSEVIHVEEKGGDVWGQYRSQQEVDALMDSQHPRGKRGAPLRRRLCQSKDEMQVGFERVRLVDAAEEAERKVREDIEQEHLRQLAAVXXXXXXXXXXXXXXXXXXXXXXXGDSSTRRSSRKRPGPSSPGKFAAVSTTIASPPVGALEHRTQGSNGNSNSSSGRMEAARAAAEAE------------AAQPYVPLLPAWRHVARRGDRDFLRNLKLELTSLEEQVAPLGNTTVTGRHSKDRHGWVREVATARDVLALRRPAVQLERALYACSRDMMENLAMDWSSMAVAEGEDVSWDSPYDWTFLKSQGRDRRKGKDREQRASLGEDGRAAPSATVGSGSAAIGGGGPTAAEVGASARAPSRGKRNVAKKRESGRELTSPAAAQAXXXXXXXXXXAAAFMGRGRQEGEGTREGAQGARKVAREEVIEEARVFAAGDSAGAGVNSLAELLVPGGKAPPEESSAGCLPSAGRVVFQDEDDAQK-------------------------------------------------------------------------------------------------------------------------------------ATTPAVATRASDEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVDDEKDRTRLKEGADDRTATDAGGSISHPPEAAGGGSAADNVASEANSGPMEVEGGGVELERNSGTMKTAAVEDSREGEPAGMSDDGNGDKTPVLDGQTEATPDAGGDTGPNAAFPVEDAAGA-AASTPA------------DSGGNEGDGGNPSKTA-------------------------VALGVGG---------------------------------------------------DGSTKKTPTTMTKAEADDAGLTEGNEMDGMDEAAEEXXXXXXXXX-VEPEKRWEMEREGIALANLSAELQGALSTDPAFREAWRKEMLAARTLAGVATLVYSLLTSAAGVLPALQEQDMQEQALINQDLATNQALRVRCSSTSEIVWARLHGFPWWPALVVKPEGVGFQ-------------------------------------------------------MATKGLRVAHERFGSDGDPNAPHNRPNFDTQDTQXXXXXXXXXXXXXAAGTRLTGSAXXXXXXXXXXXXXXXXPATSHRSVPPGQAAQRGLALAAXXXXXXXXXXAAGGETGKVSRPRRTPKVPKYLTEGMVGDGGADAPVRSIAGKGKKRKDGRVGGSTGMWQARKSQKRGXXXXXSELEQHQPAAPAERQPSRKKMPAALAQAELASGSMSM 1762
BLAST of mRNA_E-siliculosus-1a_F_contig1069.491.1 vs. uniprot
Match: A0A6H5JEA8_9PHAE (PWWP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA8_9PHAE) HSP 1 Score: 1313 bits (3397), Expect = 0.000e+0 Identity = 869/1127 (77.11%), Postives = 896/1127 (79.50%), Query Frame = 1
Query: 3403 VAPLGNTTVTGRHSKDRHGWVREVATARDALALRRPAVQLEGALYACSRDMMENLAMDWSSMAVAEGEDVSWDSPYDWTFLKSPGRDRRKGKDREQRASLGEDGRAAPSATVGSGSAAVGGGGPTAAAVGASARTPSRGKRNVAMKRESGRELTSPAAAQAAAAKAAVSPAAPALTGRGRQEGEGTREGTQGACKMGREEVVEEARVFAARDSAVAGANSLAEALVPGGKAPPEESSAGCLPSAARVHFQDEDDAEKVTEKADSQPPAADTPVNEATPATGDKQDAATSTTNMARLGGLQASHSAQGGAYSTPLEGKVGVARPASSSEQATAQDGGEEGLNANSXXXXXXXXXXXXXXXXXXXXXDAEGSSVDTSDTITATGRTVASESKATTPAVATRASEEXXXXXXXXXXXXRKAGKTDISGDSSGGLKGGGVVGPAGVDDEEGRTRLKEGADDRTATDAGGSISHPPEAASAGHAADSVASEASSGPMEVEGGGVELEKNSGTMKTAVVEEWRKPA-VSDDVNGDKTPVLDGKMEATPAAGDDTGPDAAFLVKDAAGAPAVATVAAAXXXXXXXXXXXXGGNKGDGG-----NPSKTAGVDLVEKTKPSGTQDDNDDGDDDAKVPASVEGMQEGGRRDAGAGEQQVEEDNAVPAAAVTXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTATIKTKAEADDAGLTEHNEMDGMDXXXXXXXXXXXXXXXVEPGKRWEMEREGIALGNLSAELQGALSTDPAFREAWRQEMLAARTLAGVATLVHSLLASAAGVLPALQEQDMQEQALINQDLATNQALHVRCSSTSEIVWARLHGFPWWPALVVKPEGAGFQRSLLEAGDRLVVFMNEHQQFRVNHRFCKPYVGTTKHDDVMRRASRNNRRMARAIKMATKGLQVAHERFGSDGDPNAPHNRPNFDTQDTQQQQPAADADAAPP-AAGTRLTGSATVAPXXXXXXXXXXXXTATTHRSVPPGQAAQRGLALAXXXXXXXXXXXAAGG---ETVKVSRPRRTPKVPKYLTEGMVGDGDADAPVRSIAGKGKKRKDGRVGGSTGMWQARKSHKRGGXXXXSELEQHQPAAPAERQPSRKKMPTALAQAAVASGSMNM 6753
VAPLGNTTVTGRHSKDRHGWVREVATARDALALRRPAVQLE AL RDMME+LA+DWSSMAVAEGEDVSWDSPYDWTFLK GRDRRKGKDREQRAS GEDGRAA SATVGSG AAVGG GPTAAAVGA+AR PSRGKR VA KRE GRELTSPAAAQA VSPAA ALTGRGRQEGE REGTQGA KM REEV EEARVFAA D A AGANSLAE LVP G+A PEESSAGCLPSAARV F D DDAEKVTEKADSQPP ADTP NEAT TGDKQDAATSTTN ARLGGLQAS SAQ AYSTPLEGKVGV RPASSSE+ATA+DGGE GLNA++ XXXXXXXXXXXXXXXXXX DAEGSSV TSDT TATGRTVASE KATTPAVATRASEE KAGKTDISG+ GG +GGGV+GPAGVDDE+ TRLKE ADD TATDAGGSISHP EAA G AA +VASEASSGPMEVEGGGVELEK S TMK A VEE R+ A +SDD NGDKTPVLDG+ EATPAAGDDTGPD AF +K AAGA AVA XXXXXXXXXXXX N SKTAGVD EKTKPSGTQDD+DDGDDDA+VP VEGMQEGGRRD GAGEQQVE DNAV AAV +K TKAEAD AGLTE N XXXXVEP KRWEMEREGIAL NLSA LQGALSTDPAFREAWRQEMLAARTLAGVATLV+SLLASAAGVLPALQEQDMQEQALINQ ALHVRCSSTSEIVWARLHGFPWWPALVVKPEG GFQRSLLEAGDRLVVFMNE Q FRVNHRFCKPYVGTTKHD VMRRASRNNRRMARAIKMATKGL+VAHERFGSDGDPNAPHNRPNFDTQDTQ AAG RLTGSAT AP XXXXXXXXXX TTHR VPPGQAAQRGLALAXXXXXXXXXXX AGG ETV VSRPRRTPK PKYL EGMVG+G ADAPVRSIAGKGK DGRVGGS+G+W+A KS KRG XXXX ERQPSRKKM TALAQA +ASGSMNM
Sbjct: 8 VAPLGNTTVTGRHSKDRHGWVREVATARDALALRRPAVQLERAL----RDMMESLAIDWSSMAVAEGEDVSWDSPYDWTFLKLQGRDRRKGKDREQRASSGEDGRAALSATVGSGIAAVGGWGPTAAAVGAAARAPSRGKRKVAKKREGGRELTSPAAAQAXXXXXXVSPAAAALTGRGRQEGESIREGTQGASKMAREEVAEEARVFAAGDIAGAGANSLAELLVPVGEASPEESSAGCLPSAARVAFHDGDDAEKVTEKADSQPPTADTPANEATQVTGDKQDAATSTTNTARLGGLQASDSAQLSAYSTPLEGKVGVVRPASSSEKATARDGGE-GLNASNAXXXXXXXXXXXXXXXXXX--DAEGSSVGTSDTSTATGRTVASEPKATTPAVATRASEEAKEVRALNKVKEEKAGKTDISGERMGGFRGGGVIGPAGVDDEKDCTRLKEEADDGTATDAGGSISHPREAAGGGSAAGNVASEASSGPMEVEGGGVELEKGSATMKMAAVEESREQAGMSDDGNGDKTPVLDGQTEATPAAGDDTGPDDAFFLKGAAGAAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTSKTAGVDRFEKTKPSGTQDDSDDGDDDAEVPEIVEGMQEGGRRDPGAGEQQVEADNAVATAAVAAATVALSVAGDGST-------------KKPTMTMTKAEADHAGLTEGNVSLKRVDLEPRYEEDEEXXXXVEPEKRWEMEREGIALANLSAGLQGALSTDPAFREAWRQEMLAARTLAGVATLVYSLLASAAGVLPALQEQDMQEQALINQ------ALHVRCSSTSEIVWARLHGFPWWPALVVKPEGVGFQRSLLEAGDRLVVFMNEQQHFRVNHRFCKPYVGTTKHDGVMRRASRNNRRMARAIKMATKGLRVAHERFGSDGDPNAPHNRPNFDTQDTQXXXXXXXXXXXXALAAGERLTGSATAAPPAXXXXXXXXXXXXTTHRLVPPGQAAQRGLALAXXXXXXXXXXXXAGGRRGETVMVSRPRRTPKPPKYLIEGMVGNGGADAPVRSIAGKGK---DGRVGGSSGVWRASKSQKRGXXXXXXXXXXXXXXXXXERQPSRKKMLTALAQAELASGSMNM 1105
BLAST of mRNA_E-siliculosus-1a_F_contig1069.491.1 vs. uniprot
Match: A0A6H5JBK5_9PHAE (WHIM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBK5_9PHAE) HSP 1 Score: 624 bits (1609), Expect = 4.900e-200 Identity = 407/671 (60.66%), Postives = 415/671 (61.85%), Query Frame = 1
Query: 454 MLSRPSPLPFXXXXXXXXXXXSGLAVGSTVPVERAASPDGSKRSRDSXXXXXXXXXXXXXX---GSTEANPWSGDVMRSARGGCDIDRGRRPGEEQEQQLQPPSFQDMVVEALHALSDSRGSSKLATVKWLKSSSRYGWMAAPPDEAKFKANVAAGVKQALEE-GKVVQVRTNYRISPDHARALNLGLPAKPNKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTTATEMTVVSARVENPHTNTGADDDSSAPGPAPDATPEASSTISGCSEPXXXXXXXXXXXXXXXXXXXXXXXAPSHGVKEAVTEE-GTGGLAWAAGEEPKPKTIKRPTGRSKGRTPKTIDGXXXXXXXXXXXVSKGSSTSRSQALDLVEDDVLHAREQEAQTGDGATAEPPLRSPRPTPVNRLRVPAGAVGDLLTVWDFLKTFGHELNLKEASVLTLEEFETVVLWSSNNN-KRKKSVHPLIAGLHLALLREALGRKVDGSPCGEAEAVTTSMAPVRRILGDLLNPATWPEVLRRFAMAFLRYSRALFSRHGRGRGEWVDEGHPLATAVETLSRRGYGDLSSSETLCVLRWLSDVLMDSCSVRAKIAQHAERQSRVTAGDRKKAEERDHLVAESLSRSLAHRGR 2448
MLSRPSPLPF SGL +GSTVPVERAASPDG KRSRDS XXXXXXXXXXX GSTEANPWSGDVMRSARG CD D RRPGEEQEQQLQPPSF DMVVEALHALSDSRGSSKLATVKWLKSSSRYGWMAAPPDEAKFKANVAAGVKQ G +V + + G D APSHGVKE VTEE GTG LAWAAGEEPKP IKRPTGRSKGRTPKTIDG XXXXX KGS SRSQALDLVED VLHAREQEAQTGDGATAEPPLR PRPTPVNRLRVPAGAVGDLLTVWDFLK EL+LKE SVLTLEEFET VLWSSNN + KKSVHPLIA HL + APVRRILGDLLNPATWPEVLRRFAMA+LRYSRALFSRHGRGRGE VDEGHPLATAVETLSRRG GDLSSSETLCVLRWLSDVLMDS SVRAKIAQHAE QSRVTA DRKKAEERDHLVAESLS SLAHRGR
Sbjct: 1 MLSRPSPLPFASASATTAKSKSGLTIGSTVPVERAASPDGGKRSRDSSSAXXXXXXXXXXXXXNGSTEANPWSGDVMRSARGSCDGDSSRRPGEEQEQQLQPPSFPDMVVEALHALSDSRGSSKLATVKWLKSSSRYGWMAAPPDEAKFKANVAAGVKQVGRWFGGIV-------------------------------------------------------------------------------------------------------------------YCDGGGD----------------------------------------------GGGAPSHGVKETVTEEEGTGELAWAAGEEPKPNAIKRPTGRSKGRTPKTIDGGGFSNSXXXXXXPKGSRVSRSQALDLVEDGVLHAREQEAQTGDGATAEPPLRPPRPTPVNRLRVPAGAVGDLLTVWDFLK----ELHLKEPSVLTLEEFETAVLWSSNNTFESKKSVHPLIAEFHLDM-----------------------QAPVRRILGDLLNPATWPEVLRRFAMAYLRYSRALFSRHGRGRGEGVDEGHPLATAVETLSRRGCGDLSSSETLCVLRWLSDVLMDSRSVRAKIAQHAELQSRVTARDRKKAEERDHLVAESLSLSLAHRGR 483
BLAST of mRNA_E-siliculosus-1a_F_contig1069.491.1 vs. uniprot
Match: A0A6H5KS71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS71_9PHAE) HSP 1 Score: 166 bits (419), Expect = 5.660e-42 Identity = 174/278 (62.59%), Postives = 176/278 (63.31%), Query Frame = 1
Query: 2698 REFNRYWWFGGGPSEVIHVEEKGGDVWGQYRSQQEVDALMDSQHPRGKRGAPLRRRLCQ-----------------------SKDEMQVGFERVRLVDAAEEAERKAREDIEQERFRQLAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPA-------------------KSAAVSMTTAPPPVGALEHRAQGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQPYVPLLPAWRHVARRGDRDFLRNLKLELTSLEEQV 3405
REFN YWWFGGG SE EVDALMDSQHP+GKRGAPLRRRLCQ SKDEMQVGFERVRLVDAAEEAERKA+EDIEQER RQLAEAXXXXXXXXXXXXXXXXXXX P KS AV MTTA PVGALE RAQGS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VPLLPAWRHVARR DR FLRNLKLEL SLEEQ
Sbjct: 3 REFNNYWWFGGGRSE-------------------EVDALMDSQHPQGKRGAPLRRRLCQGGYISISNRNAAFQSPSSINLSKSKDEMQVGFERVRLVDAAEEAERKAQEDIEQERLRQLAEAXXXXXXXXXXXXXXXXXXXRGVNGDSSTRRSSRKRPGPSSPVRCSCENVNVFAGVGFDASGKSVAVRMTTADLPVGALERRAQGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------VPLLPAWRHVARREDRGFLRNLKLELISLEEQA 255
BLAST of mRNA_E-siliculosus-1a_F_contig1069.491.1 vs. uniprot
Match: A0A7S2BI97_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BI97_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 7.520e-9 Identity = 42/135 (31.11%), Postives = 67/135 (49.63%), Query Frame = 1
Query: 5770 LPALQEQDMQEQALINQ-------DLATNQALHVRCSSTSEIVWARLHGFPWWPALVVKPEGAGFQRSLLEAGDRLVVFMNEHQQFRVNHRFCKPYVGTTKHDDVMRRASRNNRRMARAIKMATKGLQVAHERFG 6153
LP L+EQ A +N A + ++ V TSE+VWAR+ G+PWWP+ V +P F +++ E + LVVF+ E Q+ + P+ G + D M + R+ +R R T+ +Q E+ G
Sbjct: 3 LPDLEEQAANALAFLNDANAYGEDGRAIDPSVRVSSEPTSEMVWARVKGYPWWPSRVHRPRDPKFSQAMSERNEILVVFVGEAAQYHLPLEDTAPFTGDEQ-DSHMPKKDRHIQRSLRLAIHTTRMIQAHEEKTG 136
BLAST of mRNA_E-siliculosus-1a_F_contig1069.491.1 vs. uniprot
Match: A0A7S3JYV4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYV4_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 5.600e-5 Identity = 31/88 (35.23%), Postives = 47/88 (53.41%), Query Frame = 1
Query: 5875 VWARLHGFPWWPALVVKPEGAGFQRSLLEAGDRLVVFMNEHQQFRVNHRFCKPYVGTTKHDDVMRRASRNNRRMARAIKMATKGLQVA 6138
VWAR+ G+PWWPA P+ F ++L +L+VF+NE + ++ +P+ G DD RM ++IK KGLQ+A
Sbjct: 1098 VWARIRGYPWWPAREYIPKSPHFAQALERRNHKLLVFVNESVMYLIDSNSVEPFTGLP--DDP---------RMPKSIKQCAKGLQLA 1174 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1069.491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1069.491.1 >prot_E-siliculosus-1a_F_contig1069.491.1 ID=prot_E-siliculosus-1a_F_contig1069.491.1|Name=mRNA_E-siliculosus-1a_F_contig1069.491.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=2418bp SQTNLGEDSLSKEGEAGAATAACKVKVKVRFTGTSKGVSDEMVQAKDVLRback to top mRNA from alignment at E-siliculosus-1a_F_contig1069:18139..37012- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1069.491.1 ID=mRNA_E-siliculosus-1a_F_contig1069.491.1|Name=mRNA_E-siliculosus-1a_F_contig1069.491.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=18874bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1069:18139..37012- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1069:18139..37012- >mRNA_E-siliculosus-1a_F_contig1069.491.1 ID=mRNA_E-siliculosus-1a_F_contig1069.491.1|Name=mRNA_E-siliculosus-1a_F_contig1069.491.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=14508bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1069:18139..37012- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |