prot_E-siliculosus-1a_F_contig10680.484.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10680.484.1
Unique Nameprot_E-siliculosus-1a_F_contig10680.484.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length39
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10680.484.1 vs. uniprot
Match: D8LKF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF2_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 1.330e-17
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0
Query:    1 MSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLA 38
            MSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLA
Sbjct:  241 MSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLA 278          
BLAST of mRNA_E-siliculosus-1a_F_contig10680.484.1 vs. uniprot
Match: A0A6H5JXW2_9PHAE (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXW2_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 2.210e-16
Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 0
Query:    1 MSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLA 38
            MSLNFCVTDGRHIVCSRYRSHARQ+PPSLFVLAGAG A
Sbjct:  235 MSLNFCVTDGRHIVCSRYRSHARQNPPSLFVLAGAGFA 272          
BLAST of mRNA_E-siliculosus-1a_F_contig10680.484.1 vs. uniprot
Match: A0A0C9T6T1_PLICR (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Plicaturopsis crispa FD-325 SS-3 TaxID=944288 RepID=A0A0C9T6T1_PLICR)

HSP 1 Score: 47.8 bits (112), Expect = 4.090e-5
Identity = 20/36 (55.56%), Postives = 25/36 (69.44%), Query Frame = 0
Query:    2 SLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGL 37
            SLN C TDG  +V  RYR+HA + PPSL+V   AG+
Sbjct:  253 SLNLCTTDGEQMVAVRYRNHATEQPPSLYVSTRAGV 288          
BLAST of mRNA_E-siliculosus-1a_F_contig10680.484.1 vs. uniprot
Match: A0A1L7X069_9HELO (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Phialocephala subalpina TaxID=576137 RepID=A0A1L7X069_9HELO)

HSP 1 Score: 47.8 bits (112), Expect = 4.090e-5
Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 0
Query:    3 LNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAG 36
            LN CVTDGR +V  R+R+HA + PPSL+V   AG
Sbjct:  250 LNICVTDGRSLVACRFRNHATEQPPSLYVSTTAG 283          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10680.484.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LKF2_ECTSI1.330e-17100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXW2_9PHAE2.210e-1694.74Glutamine amidotransferase type-2 domain-containin... [more]
A0A0C9T6T1_PLICR4.090e-555.56Glutamine amidotransferase type-2 domain-containin... [more]
A0A1L7X069_9HELO4.090e-558.82Glutamine amidotransferase type-2 domain-containin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 1..37
e-value: 1.3E-5
score: 26.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10680contigE-siliculosus-1a_F_contig10680:1765..2317 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10680.484.1mRNA_E-siliculosus-1a_F_contig10680.484.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10680 1669..2329 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10680.484.1 ID=prot_E-siliculosus-1a_F_contig10680.484.1|Name=mRNA_E-siliculosus-1a_F_contig10680.484.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=39bp
MSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029055Ntn_hydrolases_N