Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10680.484.1 vs. uniprot
Match:
A0A6H5JXW2_9PHAE (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXW2_9PHAE)
HSP 1 Score: 140 bits (353), Expect = 1.300e-37
Identity = 72/87 (82.76%), Postives = 73/87 (83.91%), Query Frame = 1
Query: 1 AAPAMSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLA*------------PRTSVVISSEPLCRSTKSWELVPRNSMVIVEG 225
AAPAMSLNFCVTDGRHIVCSRYRSHARQ+PPSLFVLAGAG A PRTSVVISSEPLCRSTKSWELVPRNSMVIVEG
Sbjct: 231 AAPAMSLNFCVTDGRHIVCSRYRSHARQNPPSLFVLAGAGFACDEAGCLRQTATEPRTSVVISSEPLCRSTKSWELVPRNSMVIVEG 317
BLAST of mRNA_E-siliculosus-1a_F_contig10680.484.1 vs. uniprot
Match:
D8LKF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF2_ECTSI)
HSP 1 Score: 90.5 bits (223), Expect = 1.710e-19
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = 1
Query: 1 AAPAMSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLA 126
AAPAMSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLA
Sbjct: 237 AAPAMSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLA 278
BLAST of mRNA_E-siliculosus-1a_F_contig10680.484.1 vs. uniprot
Match:
A0A835ZAJ1_9STRA (Nucleophile aminohydrolase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAJ1_9STRA)
HSP 1 Score: 69.3 bits (168), Expect = 2.750e-12
Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 1
Query: 10 AMSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLA*PRTS------------VVISSEPLC-RSTKSWELVPRNSMVI 216
A SLN VT+G H+V SRYR+ + PPSL++ G+GLA + VVISSEPLC RS + W +VP+N+MV+
Sbjct: 206 ASSLNMAVTNGLHVVVSRYRNSPTEQPPSLYMSHGSGLAVGDDNCLRFARPHGVGGVVISSEPLCSRSLERWSIVPKNTMVV 287
BLAST of mRNA_E-siliculosus-1a_F_contig10680.484.1 vs. uniprot
Match:
UPI0019B45B5D (Class II glutamine amidotransferase n=1 Tax=bacterium TaxID=1869227 RepID=UPI0019B45B5D)
HSP 1 Score: 54.7 bits (130), Expect = 5.970e-7
Identity = 33/80 (41.25%), Postives = 43/80 (53.75%), Query Frame = 1
Query: 19 LNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLA*P--RT----------SVVISSEPLCRSTKSWELVPRNSMVIVE 222
LNFCV++GR IV +RY ++ R P SL+ + G RT +VVISSEP W V RNSM+IV+
Sbjct: 196 LNFCVSNGRSIVATRYTTNPRVQPASLYYMFGRDYVAEGERTYMTPDEGQSEAVVISSEPFTSHKSEWIKVTRNSMIIVD 275
BLAST of mRNA_E-siliculosus-1a_F_contig10680.484.1 vs. uniprot
Match:
A0A316V2F2_9BASI (N-terminal nucleophile aminohydrolase n=1 Tax=Jaminaea rosea TaxID=1569628 RepID=A0A316V2F2_9BASI)
HSP 1 Score: 52.4 bits (124), Expect = 4.390e-6
Identity = 29/80 (36.25%), Postives = 39/80 (48.75%), Query Frame = 1
Query: 19 LNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLA*PRTS-------------VVISSEPLCRSTKSWELVPRNSMVIV 219
+NFCVTDG+ IVC+RY S + SL+ +G VV++SEPL W VP N+M+IV
Sbjct: 267 MNFCVTDGQSIVCTRYVSSLHDEAASLYFSSGTSFYEREKGRFRMRKEDRRQNIVVVASEPLTFEKADWMEVPTNTMIIV 346
BLAST of mRNA_E-siliculosus-1a_F_contig10680.484.1 vs. uniprot
Match:
A0A316U354_9BASI (N-terminal nucleophile aminohydrolase n=1 Tax=Pseudomicrostroma glucosiphilum TaxID=1684307 RepID=A0A316U354_9BASI)
HSP 1 Score: 50.4 bits (119), Expect = 2.090e-5
Identity = 29/80 (36.25%), Postives = 41/80 (51.25%), Query Frame = 1
Query: 19 LNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGA-------GLA*PRTS------VVISSEPLCRSTKSWELVPRNSMVIV 219
+NFCVTDG I+C+RY S + SL+ +G G+ R VV++SEPL W VP N+M+I+
Sbjct: 233 MNFCVTDGLSILCTRYVSSLHDEAASLYFSSGTSFYEREKGMFRMRKEDRRQNIVVVASEPLTFQKADWMEVPTNTMIII 312
BLAST of mRNA_E-siliculosus-1a_F_contig10680.484.1 vs. uniprot
Match:
A0A1Y1YQA9_9FUNG (N-terminal nucleophile aminohydrolase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YQA9_9FUNG)
HSP 1 Score: 50.1 bits (118), Expect = 2.720e-5
Identity = 25/80 (31.25%), Postives = 41/80 (51.25%), Query Frame = 1
Query: 19 LNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLA*PRTS-------------VVISSEPLCRSTKSWELVPRNSMVIV 219
+NF VTDG+ ++C+RY S A Q+ SL+ +G + VV++SEPL W +P N++V++
Sbjct: 199 MNFAVTDGKTVICTRYISSATQEAASLYFSSGTRFESYKPGHYRMIKADKREDIVVVASEPLTFEQADWITIPTNTLVVI 278
BLAST of mRNA_E-siliculosus-1a_F_contig10680.484.1 vs. uniprot
Match:
A0A0M8MKW3_9BASI (N-terminal nucleophile aminohydrolase n=1 Tax=Malassezia pachydermatis TaxID=77020 RepID=A0A0M8MKW3_9BASI)
HSP 1 Score: 50.1 bits (118), Expect = 2.800e-5
Identity = 29/80 (36.25%), Postives = 39/80 (48.75%), Query Frame = 1
Query: 19 LNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGL------------A*PRTSVV-ISSEPLCRSTKSWELVPRNSMVIV 219
LNFCVTDG+ +VC+RY S + SLF G A R +V I+SEPL W +P N++V +
Sbjct: 217 LNFCVTDGKSVVCTRYVSSKTDEAASLFFSTGTSFYEHSKGEYRMVKAGRRQKIVMIASEPLTFEQADWMEIPSNTLVCI 296
BLAST of mRNA_E-siliculosus-1a_F_contig10680.484.1 vs. uniprot
Match:
A0A0C9T6T1_PLICR (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Plicaturopsis crispa FD-325 SS-3 TaxID=944288 RepID=A0A0C9T6T1_PLICR)
HSP 1 Score: 50.1 bits (118), Expect = 2.800e-5
Identity = 23/50 (46.00%), Postives = 31/50 (62.00%), Query Frame = 1
Query: 10 AMSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLA*PRTSVVISSE 159
A SLN C TDG +V RYR+HA + PPSL+V AG+ R V + ++
Sbjct: 251 ANSLNLCTTDGEQMVAVRYRNHATEQPPSLYVSTRAGVVLNRKFVNVEND 300
BLAST of mRNA_E-siliculosus-1a_F_contig10680.484.1 vs. uniprot
Match:
A0A2T9ZL54_9FUNG (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9ZL54_9FUNG)
HSP 1 Score: 49.7 bits (117), Expect = 3.670e-5
Identity = 30/80 (37.50%), Postives = 42/80 (52.50%), Query Frame = 1
Query: 19 LNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGA--------GLA*PRT-----SVVISSEPLCRSTKSWELVPRNSMVIV 219
LNF VTDG +VC+RY S + SLF +G+ G R SVVI+SEPL W ++P N++++V
Sbjct: 199 LNFAVTDGDTVVCTRYISSCTLEAASLFFSSGSEFKSEIGGGYRMIRANKRDKSVVIASEPLTFERNDWLIIPTNTLLVV 278
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10680.484.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 1.30e-37 / Id = 82.76 Expect = 1.71e-19 / Id = 100.00 Expect = 2.75e-12 / Id = 46.34 Expect = 5.97e-7 / Id = 41.25 Expect = 4.39e-6 / Id = 36.25 Expect = 2.09e-5 / Id = 36.25 Expect = 2.72e-5 / Id = 31.25 Expect = 2.80e-5 / Id = 36.25 Expect = 2.80e-5 / Id = 46.00 Expect = 3.67e-5 / Id = 37.50 Sequence A0A6H5JXW2_9PHAE D8LKF2_ECTSI A0A835ZAJ1_9STRA UPI0019B45B5D A0A316V2F2_9BASI A0A316U354_9BASI A0A1Y1YQA9_9FUNG A0A0M8MKW3_9BASI A0A0C9T6T1_PLICR A0A2T9ZL54_9FUNG Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1 Stop 1 Cds size 117 Model size 225 Exons 2 Hectar predicted targeting category no signal peptide or anchor BRITE ko00000,ko00001,ko01000,ko01002 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. M EC 5.4.2.3 EggNOG OGs COG0449@1,KOG1268@2759 EggNOG free text desc. glutamine-fructose-6-phosphate transaminase (isomerizing) activity GOs GO:0003674,GO:0003824,GO:0004044,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006518,GO:0006575,GO:0006749,GO:0006751,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0009056,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0016787,GO:0019538,GO:0032991,GO:0034641,GO:0042219,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044424,GO:0044464,GO:0051186,GO:0051187,GO:0061672,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368 KEGG Pathway ko00520,ko01100,ko01130,map00520,map01100,map01130 KEGG Reaction R08193 KEGG ko ko:K01836,ko:K14262,ko:K18802 KEGG rclass RC00408 Preferred name DUG3 Seed eggNOG ortholog 2880.D8LKF2 Seed ortholog evalue 1.7e-14 Seed ortholog score 84.0 Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10680.484.1
>prot_E-siliculosus-1a_F_contig10680.484.1 ID=prot_E-siliculosus-1a_F_contig10680.484.1|Name=mRNA_E-siliculosus-1a_F_contig10680.484.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=39bp
MSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLA* back to top mRNA from alignment at E-siliculosus-1a_F_contig10680:1669..2329-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10680.484.1 ID=mRNA_E-siliculosus-1a_F_contig10680.484.1|Name=mRNA_E-siliculosus-1a_F_contig10680.484.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=661bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10680:1669..2329- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)GCGGCACCGGCC ATGTCCCTGAACTTCTGTGTGACGGACGGGAGGCACAT
CGTTTGCTCGCGGTATCGCAGCCACGCCCGGCAGGATCCTCCGAGCTTGT
TCGTTCTTGCGGGGGCAGGGCTTGCAT GTGACGAGGCGGGGTGCTTGCGG
CTGACCGCCCCTGGTGAGACAAGGGCGCCAAATTCATTGTTCGGTTTGTT
TCATGTTGCATCCGTTCTGTCTGGAGGTTACAGTCGAAGACGGGGGGGGG
GGGTCTACAATGAACATGTGCGTAGCAATGGACTGTCTCGGCCACCCGCA
TTTTTGGGGTATCGAGTGAACGTTGAGTGCACAGCCTCCCTTAGGTCTAG
ATGCACACGTGCGCAACGAGTTGGTGATCGTCGATGTTTCGCTGCAGAAG
CAAGGCCCGCTATCAGGCGATCAACAGTTGAATTCCTCAACAGTCTCAGT
CAACTCCTATCCTGTCCGTCGTTCTGCCTTCGCCACCCTGTCCGCGAAAC
CGCGCCTTCACATGCACCTGCGGCGCCAAAATGTGTGCATTGGGTCGGAT
TGCGTTGTTGAAGAA CCTCGCACAAGCGTGGTGATTTCGTCGGAACCTCT
CTGCCGCTCCACCAAGAGCTGGGAGCTGGTGCCGCGCAACAGCATGGTGA
TCGTGGAAGGC back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10680:1669..2329-
>mRNA_E-siliculosus-1a_F_contig10680.484.1 ID=mRNA_E-siliculosus-1a_F_contig10680.484.1|Name=mRNA_E-siliculosus-1a_F_contig10680.484.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=234bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10680:1669..2329- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top