prot_E-siliculosus-1a_F_contig1067.475.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1067.475.1
Unique Nameprot_E-siliculosus-1a_F_contig1067.475.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length304
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1067.475.1 vs. uniprot
Match: D7FNH6_ECTSI (Major facilitator transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNH6_ECTSI)

HSP 1 Score: 531 bits (1369), Expect = 1.870e-185
Identity = 288/303 (95.05%), Postives = 291/303 (96.04%), Query Frame = 0
Query:    1 PPSLLSSHRTSSLLMQLAVVLACFSLSLNVFSVYYNYFDFRYHWSPLDISLYFSTFGILLALTSGLLIRFLVPKRLSVGRGVLLGLALQSSSTTLFGLASQGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQGAVQCLRNVSQGLAGVLYGQIFSLGVSSRVEKALGFVLPGLPLFCASGCGATALAIAWYALRKAGETGAADPKSTANPSDVEAEEGGMMASNTVDVTDSSTATPAEDSSSDGGRSGKEAPAANPTALMQAASRVIGLGDEEDTMSDMSEPLLPRGDRFDSRSSS 303
            P S+L     SSLLMQLAVVLACFSLSLNVFSVYYNYFDFRYHWSPLDISL+FSTFGILLALTSGLLIRFLVPKRLSVGRGVLLGLALQSSSTTLFGLASQGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQGAVQCLRNVSQGLAGVLYGQIFSLGVS+RVE ALGFVLPGLPLFCASGCGATAL IAWYALRKAGETGAADPKSTANPSDVEAEE GMMASNTVDVTDSSTATPAEDSS DGGRSGKEAPAANPTALMQ ASRV GLGDEEDTMSDMSEPLLPRGDRFDSRSSS
Sbjct:  273 PFSVLKVFLESSLLMQLAVVLACFSLSLNVFSVYYNYFDFRYHWSPLDISLFFSTFGILLALTSGLLIRFLVPKRLSVGRGVLLGLALQSSSTTLFGLASQGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQGAVQCLRNVSQGLAGVLYGQIFSLGVSTRVENALGFVLPGLPLFCASGCGATALTIAWYALRKAGETGAADPKSTANPSDVEAEEDGMMASNTVDVTDSSTATPAEDSSGDGGRSGKEAPAANPTALMQPASRVTGLGDEEDTMSDMSEPLLPRGDRFDSRSSS 575          
BLAST of mRNA_E-siliculosus-1a_F_contig1067.475.1 vs. uniprot
Match: D7FNH7_ECTSI (Tetracycline-efflux transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNH7_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 3.270e-41
Identity = 93/206 (45.15%), Postives = 129/206 (62.62%), Query Frame = 0
Query:    1 PPSLLSSHRTSSLLMQLAVVLACFSLSLNVFSVYYNYFDFRYHWSPLDISLYFSTFGILLALTSGLLIRFLVPKRLSVGRGVLLGLALQSSSTTLFGLASQGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQGAVQCLRNVSQGLAGVLYGQIFSLGVSSRVEKALGFVLPGLPLFCASGCGATALAIAWYALRKAGET 206
            P S+L     S  L+++A     F LSLNVF+  YNY D+R+ W+P +IS +F+T+ IL+AL  G +IRF+VPKRL+  +G L G+++Q  S  + GL  +GWM Y  LV   LQ ITEPC+Q +MA  VG + QGSLQGAV  LR V +G+A  ++ Q+FS G S   E+A        P F A+     +LA+AW+ LRK  +T
Sbjct:  348 PLSVLKVFLESRALLRIACSYFLFVLSLNVFATGYNYVDYRFGWTPSEISYFFATYNILMALAGGWVIRFIVPKRLTEEKGALFGISVQVFSVMVSGLCFRGWMLYPALVFGALQNITEPCLQAIMATFVGPELQGSLQGAVMSLRVVGEGVAAPVFTQVFSAGASVGFEEA--------PFFLATAISLVSLAVAWWPLRKLDKT 545          
BLAST of mRNA_E-siliculosus-1a_F_contig1067.475.1 vs. uniprot
Match: A0A6I1K2G3_9BACT (MFS transporter DHA1 family tetracycline resistance protein n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A6I1K2G3_9BACT)

HSP 1 Score: 88.2 bits (217), Expect = 5.500e-16
Identity = 55/182 (30.22%), Postives = 96/182 (52.75%), Query Frame = 0
Query:   32 SVYYNYFDFRYHWSPLDISLYFSTFGILLALTSGLLIRFLVPKRLSVGRGVLLGLALQSSSTTLFGLASQGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQGAVQCLRNVSQGLAGVLYGQIFSLGVSSRVEKALGFVLPGLPLFCASGCGATALAIAWYALRKAGETGAADPKS 213
            S +  Y  +RYHW+P    +  +  G+  A+  G L R ++P RL   R V +GL + ++    +GLA++GWM YV++    +  I+ P +QG+++  VGAD QG++QG++  L +++  L   L   +F   +S+     L    PG   F +S     A+ +A  + R+   T  ++P S
Sbjct:  241 STWVLYTSYRYHWTPGQTGMSLAMVGLTAAIVQGGLTRAIIP-RLGERRSVTVGLTISAAGLIAYGLATEGWMAYVIIAVASISGISGPSVQGLISRSVGADEQGAVQGSLNSLASIAGVLGPPLATGLFGFFISAGAPVKL----PGAAFFFSSALTVAAMLLAVRSFRRELPTAKSEPAS 417          
BLAST of mRNA_E-siliculosus-1a_F_contig1067.475.1 vs. uniprot
Match: A0A2N5K755_9CHLR (Tetracycline resistance MFS efflux pump n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2N5K755_9CHLR)

HSP 1 Score: 86.7 bits (213), Expect = 1.730e-15
Identity = 55/147 (37.41%), Postives = 84/147 (57.14%), Query Frame = 0
Query:   37 YFDFRYHWSPLDISLYFSTFGILLALTSGLLIRFLVPKRLSVGRGVLLGLALQSSSTTLFGLASQGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQGAVQCLRNVSQGLAGVLYGQIFSLGVSSRVEKALGFVLPGLPLF 183
            Y  +R+ WS     L  + FGIL A+    L+R L+P RL   R +++GL        L+G+A+QGWM Y V+V T L ++ +P  QG+++N V AD QG++QGA+  L +++  +A V+   IFS   ++       F LPG P F
Sbjct:  240 YTTYRFAWSTWQQGLSLAMFGILAAVIQAGLLRVLMP-RLGERRALVIGLLSSLIGFVLYGMATQGWMMYFVMVGTALGFLAQPAAQGLISNAVAADEQGAVQGALASLLSLTGIVAPVIATGIFSYFTAADQP----FKLPGAPFF 381          
BLAST of mRNA_E-siliculosus-1a_F_contig1067.475.1 vs. uniprot
Match: A0A7S1TPX7_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPX7_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.900e-15
Identity = 51/161 (31.68%), Postives = 91/161 (56.52%), Query Frame = 0
Query:   27 SLNVFSVYYNYFDFRYHWSPLDISLYFSTFGILLALTSGLLIRFLVPKRLSVGRGVLLGLALQSSSTTLFGLASQGWMCYVVLVATV-LQYITEPCIQGVMANHVGADRQGSLQGAVQCLRNVSQGLAGVLYGQIFSLGVSSRVEKALGFVLPGLPLFCAS 186
            ++ VF V++   D+ Y W  ++++++ +  GIL+A    +  + LVPK  S  + VL+   +Q ++ + + LA  GW  Y++LV T  +  I  P ++G++ +    ++QGSLQGA+Q L  ++     ++YG  FS G S   ++ LG    GLPL  A+
Sbjct:  258 TMAVFGVWFYILDYNYDWGVVEVTIFITVAGILIAAAQVVGTKHLVPKVFSPAQAVLVASMVQCAAFSAYALAPVGWSIYLILVLTAGVGSIGAPSLRGILTSMAPPEQQGSLQGALQGLSQLTNAFMALVYGGAFSAGTSPFWKEHLGGHFAGLPLLIAA 418          
BLAST of mRNA_E-siliculosus-1a_F_contig1067.475.1 vs. uniprot
Match: A0A521ZT07_9BACT (MFS transporter (Fragment) n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A521ZT07_9BACT)

HSP 1 Score: 76.3 bits (186), Expect = 4.270e-13
Identity = 49/151 (32.45%), Postives = 85/151 (56.29%), Query Frame = 0
Query:   37 YFDFRYHWSPLDISLYFSTFGILLALTSGLLIRFLVPKRLSVGRGVLLGLALQSSSTTLFGLASQGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQGAVQCLRNVSQGLAGVLYGQIFSLGVSSRVEKALGFV-LPGLPLFCAS 186
            Y  +RY W+P ++ L  +  G++  +  G L R ++PK L   R +++GL   +   T +GLA+QGWM YV+LV   +  I  P +QG+++  V  + QG++QGA+  L +    LAG++ G + + G+     +A   V +PG   F ++
Sbjct:    6 YTSYRYGWTPKEVGLSLALVGVMAVIVQGGLARKIIPK-LGERRSIVIGLTNATFFLTTYGLATQGWMVYVLLVVGSIGGIAMPALQGLVSRSVPLNEQGAVQGALASLAS----LAGIV-GPLVATGLFGHFVRAEATVKIPGAAFFASA 150          
BLAST of mRNA_E-siliculosus-1a_F_contig1067.475.1 vs. uniprot
Match: A0A535IJB1_9CHLR (TCR/Tet family MFS transporter n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535IJB1_9CHLR)

HSP 1 Score: 78.2 bits (191), Expect = 9.130e-13
Identity = 51/170 (30.00%), Postives = 93/170 (54.71%), Query Frame = 0
Query:   15 MQLAVVLACFSLS-LNVFSVYYNYFDFRYHWSPLDISLYFSTFGILLALTSGLLIRFLVPKRLSVGRGVLLGLALQSSSTTLFGLASQGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQGAVQCLRNVSQGLAGVLYGQIFSLGVSSRVEKALGFVLPGLPLF 183
            + L  V+ C +L+ L + S +  Y  +R++W+ L+  L  +  G++  +  G LIR L P RL   R +L+ L        L+GLA+QGWM YV++  T L ++++P  QG+++N V  + QG++QGA+  + +++  +  ++   +FS   +        F +PG   F
Sbjct:  140 LNLTAVVVCNNLAGLALQSTWVLYNAYRFNWTALEQGLSLALVGVIAIVVQGWLIRVLQP-RLGERRLLLISLVSSVIGLVLYGLATQGWMMYVIMTVTALSFLSQPAAQGLISNAVKPNEQGAIQGALTSMISLTAIVGPIVGANVFSYFTAPEQP----FKVPGAAFF 304          
BLAST of mRNA_E-siliculosus-1a_F_contig1067.475.1 vs. uniprot
Match: UPI00166C8BA5 (TCR/Tet family MFS transporter n=1 Tax=Undibacterium terreum TaxID=1224302 RepID=UPI00166C8BA5)

HSP 1 Score: 78.6 bits (192), Expect = 1.020e-12
Identity = 58/165 (35.15%), Postives = 87/165 (52.73%), Query Frame = 0
Query:   39 DFRYHWSPLDISLYFSTFGILLALTSGLLIRFLVPKRLSVGRGVLLGLALQSSSTTLFGLASQGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQGAVQCLRNVSQGLAGVLYGQIFSLGVSSRVEKALGFVLPGLPLFCASGCGATALAIAWYALRKA 203
            + R+ WSPL   L     G+   L  G+ +  L+ KR+   R VL+GLA  +++  L+GLA+QGWM Y +++  VL + + P +Q + +  V    QG+  G++  L ++   +A  L G  F LG  S   K  G VL G P F A+     AL IA+  LR A
Sbjct:  247 ELRFGWSPLQNGLSLFVVGVSSVLMQGVFLGRLI-KRIGDARAVLIGLASSTTALLLYGLATQGWMMYALILCNVLGFASGPALQAIFSKAVEPQSQGAAMGSLTALASIMS-VAATLAGT-FLLGQVSHQAK--GSVLLGAPFFMAAVMQGLALTIAYRHLRAA 406          
BLAST of mRNA_E-siliculosus-1a_F_contig1067.475.1 vs. uniprot
Match: UPI000AEEDF0E (TCR/Tet family MFS transporter n=1 Tax=Deinococcus misasensis TaxID=392413 RepID=UPI000AEEDF0E)

HSP 1 Score: 77.8 bits (190), Expect = 1.810e-12
Identity = 48/146 (32.88%), Postives = 79/146 (54.11%), Query Frame = 0
Query:   41 RYHWSPLDISLYFSTFGILLALTSGLLIRFLVPKRLSVGRGVLLGLALQSSSTTLFGLASQGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQGAVQCLRNVSQGLAGVLYGQIFSLGVSSRVEKALGFVLPGLPLFCAS 186
            RY W P       +  G++ A+  G+L+  L+PK L   R +L+GL +  +    +GLA+QGWM Y ++V   +  I  P IQG+++ HV    QG++QGA+  L ++      +L   IF+   +   +KA    +PG+P F A+
Sbjct:  233 RYGWGPQANGFSLTAVGVVGAVVQGVLVGLLIPK-LGEKRAILIGLFIGVAQFVAYGLATQGWMVYAIIVIGAIGGIAGPAIQGLVSRHVSEKEQGAIQGALSGLWSLVSIFGPILATSIFAYFTN---QKAGNPYIPGMPFFVAA 374          
BLAST of mRNA_E-siliculosus-1a_F_contig1067.475.1 vs. uniprot
Match: A0A4P7JA95_9RHOB (MFS transporter n=1 Tax=Boseongicola sp. CCM32 TaxID=2552942 RepID=A0A4P7JA95_9RHOB)

HSP 1 Score: 76.3 bits (186), Expect = 6.340e-12
Identity = 60/192 (31.25%), Postives = 95/192 (49.48%), Query Frame = 0
Query:   17 LAVVLACFSLSLNVFSVYYNYF-DFRYHWSPLDISLYFSTFGILLALTSGLLIRFLVPKRLSVGRGVLLGLALQSSSTTLFGLASQGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQGAVQCLRNVSQGLAGVLYGQIFSLGVSSRVEKALGFVLPGLPLFCASGCGATALAIAWYALRKAGETG 207
            L +V+  + +S  V+ V + Y+    + WS   I L  + +G+ +AL  GLLIR ++P  L   R V  GL L  +    +GLAS GWM +V+L  + L  I  P +Q +M+   G D+QG LQG +  L  +S  ++ ++  Q F     +  + AL    PG P   ++        I  +  R+AG  G
Sbjct:  218 LLIVMFSYQISNFVYPVIWAYYTQAAFGWSTGQIGLSLAGYGLSVALVQGLLIRVILPV-LGESRAVFWGLLLNMACLVGYGLASAGWMIWVLLPISALGAIVAPAMQALMSRRAGPDQQGELQGVLASLGALSMIISPLVMTQAFFWFTRAGADPAL----PGAPFLLSAVLMLAGFTIFAFGSRRAGADG 404          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1067.475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNH6_ECTSI1.870e-18595.05Major facilitator transporter n=2 Tax=Ectocarpus T... [more]
D7FNH7_ECTSI3.270e-4145.15Tetracycline-efflux transporter n=1 Tax=Ectocarpus... [more]
A0A6I1K2G3_9BACT5.500e-1630.22MFS transporter DHA1 family tetracycline resistanc... [more]
A0A2N5K755_9CHLR1.730e-1537.41Tetracycline resistance MFS efflux pump n=1 Tax=Ch... [more]
A0A7S1TPX7_9STRA1.900e-1531.68Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A521ZT07_9BACT4.270e-1332.45MFS transporter (Fragment) n=1 Tax=Verrucomicrobia... [more]
A0A535IJB1_9CHLR9.130e-1330.00TCR/Tet family MFS transporter n=1 Tax=Chloroflexi... [more]
UPI00166C8BA51.020e-1235.15TCR/Tet family MFS transporter n=1 Tax=Undibacteri... [more]
UPI000AEEDF0E1.810e-1232.88TCR/Tet family MFS transporter n=1 Tax=Deinococcus... [more]
A0A4P7JA95_9RHOB6.340e-1231.25MFS transporter n=1 Tax=Boseongicola sp. CCM32 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 2..203
e-value: 9.8E-11
score: 43.0
NoneNo IPR availablePANTHERPTHR23504:SF1GH21943Pcoord: 13..199
NoneNo IPR availablePANTHERPTHR23504FAMILY NOT NAMEDcoord: 13..199
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 73..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..117
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 118..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..200
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..72
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 201..303
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..37
NoneNo IPR availableTMHMMTMhelixcoord: 50..72
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 175..197
NoneNo IPR availableTMHMMTMhelixcoord: 92..114
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 10..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1067contigE-siliculosus-1a_F_contig1067:145..2128 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1067.475.1mRNA_E-siliculosus-1a_F_contig1067.475.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1067 145..2128 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1067.475.1 ID=prot_E-siliculosus-1a_F_contig1067.475.1|Name=mRNA_E-siliculosus-1a_F_contig1067.475.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=304bp
PPSLLSSHRTSSLLMQLAVVLACFSLSLNVFSVYYNYFDFRYHWSPLDIS
LYFSTFGILLALTSGLLIRFLVPKRLSVGRGVLLGLALQSSSTTLFGLAS
QGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQGAVQCLRNVSQ
GLAGVLYGQIFSLGVSSRVEKALGFVLPGLPLFCASGCGATALAIAWYAL
RKAGETGAADPKSTANPSDVEAEEGGMMASNTVDVTDSSTATPAEDSSSD
GGRSGKEAPAANPTALMQAASRVIGLGDEEDTMSDMSEPLLPRGDRFDSR
SSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf