prot_E-siliculosus-1a_F_contig10659.467.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10659.467.1
Unique Nameprot_E-siliculosus-1a_F_contig10659.467.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length257
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10659.467.1 vs. uniprot
Match: D8LPK9_ECTSI (EsV-1-147 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPK9_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 2.800e-107
Identity = 171/235 (72.77%), Postives = 190/235 (80.85%), Query Frame = 0
Query:    1 MGDFTGHDHVFEIVIPNDTEKSVRSDCDELVKIDGIFLDEKRTLFQNNMISAINRRYGAESLVGVEGQEMESLHAFGKCALDILRLTYIILTDLDSDSPWVTTPFHVNKLKYSSFVDMRESEYSVQRTPIDYFAEYMEYLA-----WGGSVLTKTLNPVSSELMADILRLFFKFSSEILGSETRKLAKTVHEASEAKGLLFNPRDFLERRNQPHTIIMERIQTKYMNDWSSSDFD 230
            MGDFTGHDHVFEIVIPN   + VRSDCDELV +DGIFLD KRTLFQ NMISAI+RRY AE+LVGVEGQE E+LHAFGKCALDILRLTYIILTDLDSDSPWVTTP  V++LK++ FV+MR++   VQRTPIDYF EYMEYLA      G        NPVSSELMA+ILRLF  FSSE LG ET KLAKTVH+ASEAKGLLF P D L R+  PH  +MER+QT+YM DWSS DF+
Sbjct:  209 MGDFTGHDHVFEIVIPNKLMR-VRSDCDELVNVDGIFLDTKRTLFQKNMISAIHRRYMAEALVGVEGQEFEALHAFGKCALDILRLTYIILTDLDSDSPWVTTPIDVHRLKWNLFVEMRKTADFVQRTPIDYFVEYMEYLAPCIDRSGVGAFRLERNPVSSELMAEILRLFSNFSSEFLGRETAKLAKTVHDASEAKGLLFKPVDLLVRQIPPHKRMMERMQTRYMEDWSSRDFE 442          
BLAST of mRNA_E-siliculosus-1a_F_contig10659.467.1 vs. uniprot
Match: Q8QND5_ESV1K (EsV-1-147 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QND5_ESV1K)

HSP 1 Score: 182 bits (462), Expect = 2.410e-49
Identity = 109/246 (44.31%), Postives = 147/246 (59.76%), Query Frame = 0
Query:    1 MGDFTGHDHVFEIVIPNDTEKSVRSDCDELVKIDGIFLDEKRTLFQNNMISAINRRYGAESLVGVEGQEMESLHAFGKCALDILRLTYIILTDLDSDSPWVTTPFHVNKLKYSSFVDMRESEYSVQRTPIDYFAEYMEYLA-------------WGGSVLTKTLNPVSSELMADILRLFFKFSSEILGSETRKLAKTVHEASEAKGLLFNPRDFLERRNQPHTIIM---ERIQTKYMNDWSSSDFD 230
            MGDF GHDHV EI+  + T+   R DC +LVK++GIF+D K+ LF  NM+S  +R    + L  + GQE ES HAFGKCALD+LRLTYIILTDLDS SPWVTTP +   +     V++  S      TPI YF  YM ++A                  +  ++NP +S LM +ILRLF + SS  L  ET KL+K + E SE++  LF  RD    R + +T+++   +RI+ K  N+W+  DFD
Sbjct:  306 MGDFVGHDHVLEIIF-DQTKLESRIDCGDLVKVNGIFVDSKKNLFHMNMMSGFSRLTLGKELSDIPGQESESHHAFGKCALDVLRLTYIILTDLDSASPWVTTPVYDRAIS----VELPISFKGTAMTPISYFIVYMAFMAPCVDRSGVGRFQLHDDVTVEGSVNPRASVLMGEILRLFSELSSTTLKEETAKLSKIIQEGSESRTQLF--RD----RGRDNTMLINKADRIKQKQTNEWALRDFD 540          
BLAST of mRNA_E-siliculosus-1a_F_contig10659.467.1 vs. uniprot
Match: A0A6H5JW74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW74_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 6.980e-19
Identity = 57/147 (38.78%), Postives = 85/147 (57.82%), Query Frame = 0
Query:    1 MGDFTGHDHVFEIVIPNDTEKSVRSDCDELVKIDGIFLDEKRTLFQNNMISAINRRYGAESLVGVEGQEMESLHAFGKCALDILRLTYIILTDLDSDSPWVTTPFH---VNKLKYSSFVDMRESEYSV---QRTPIDYFAEYMEYLA 141
            +G   G DHVFE++ P +   S    C+ +  I G+F+  K+ LF  NM S I R   +     +     +  HA GKCA D+LRLTYIILTDLD++  WV TP +   V +L  +  +++    Y+    ++TPI+YFA+YM+Y+A
Sbjct:  237 LGSVVGVDHVFELIFPVEDWLS-DGRCEPMEHIGGLFVPPKKELFFQNMTSGIERARLSRHATWLA----DKYHAVGKCAQDVLRLTYIILTDLDAEKSWVNTPAYDDVVAQLPRTHELNLAAGRYAWAFHKQTPIEYFAQYMKYMA 378          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10659.467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LPK9_ECTSI2.800e-10772.77EsV-1-147 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Q8QND5_ESV1K2.410e-4944.31EsV-1-147 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
A0A6H5JW74_9PHAE6.980e-1938.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10659contigE-siliculosus-1a_F_contig10659:403..1190 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10659.467.1mRNA_E-siliculosus-1a_F_contig10659.467.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10659 264..1297 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10659.467.1 ID=prot_E-siliculosus-1a_F_contig10659.467.1|Name=mRNA_E-siliculosus-1a_F_contig10659.467.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=257bp
MGDFTGHDHVFEIVIPNDTEKSVRSDCDELVKIDGIFLDEKRTLFQNNMI
SAINRRYGAESLVGVEGQEMESLHAFGKCALDILRLTYIILTDLDSDSPW
VTTPFHVNKLKYSSFVDMRESEYSVQRTPIDYFAEYMEYLAWGGSVLTKT
LNPVSSELMADILRLFFKFSSEILGSETRKLAKTVHEASEAKGLLFNPRD
FLERRNQPHTIIMERIQTKYMNDWSSSDFDGNSTWVCFRRGGARCTSPLT
TTFPTS*
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