prot_E-siliculosus-1a_F_contig10644.458.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10644.458.1
Unique Nameprot_E-siliculosus-1a_F_contig10644.458.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length78
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10644.458.1 vs. uniprot
Match: A0A6H5JHA7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA7_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 4.590e-21
Identity = 68/187 (36.36%), Postives = 71/187 (37.97%), Query Frame = 0
Query:    5 LSIFPQQVVTGAGFPEWRRVRLLLSEDLGQHL-----------------------------------------------------------------------------------------------------------------RKVRVMHVSRPLMGGLSWAPENTGELDMITVDKYTAVLKSYP 78
            +S+   +VVTGAGFPEWRRVRLLLSEDLGQHL                                                                                                                 RKVRVMHVSRPLMGGLSWAPENTGELDMITVDKYTAVLKSYP
Sbjct:  167 VSLVGNEVVTGAGFPEWRRVRLLLSEDLGQHLAAAGKELLCPPTAAPREAAEAXXXXXXXVVAGVGRTRDSTTGALGKEGVGGAGXXXXXXXXEEADARRKANSNAKVVKMVETHAAGEKEERGDASGKAKTATTVRGGESRKRERKVRVMHVSRPLMGGLSWAPENTGELDMITVDKYTAVLKSYP 353          
BLAST of mRNA_E-siliculosus-1a_F_contig10644.458.1 vs. uniprot
Match: D7FTN1_ECTSI (Similar to hect domain and RLD 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN1_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 2.220e-20
Identity = 67/187 (35.83%), Postives = 70/187 (37.43%), Query Frame = 0
Query:    5 LSIFPQQVVTGAGFPEWRRVRLLLSEDLGQHL-----------------------------------------------------------------------------------------------------------------RKVRVMHVSRPLMGGLSWAPENTGELDMITVDKYTAVLKSYP 78
            +S+   +VVTGAGFPEWRRVRLLLSEDLGQHL                                                                                                                 RKVRVMHVSRPLMGGLSWAPEN GELDMITVDKYTAVLKSYP
Sbjct:   63 VSLVGNEVVTGAGFPEWRRVRLLLSEDLGQHLVAAGEKPLCPPTAAPREAAEXXXXXXXXVVAVGSRTRDSTTGALGKEDAGGAAVGDGGGETEEADARRKANSNAKVVKMVETNAAGEKEERGDASGKAKTSTTVRGKESRKRERKVRVMHVSRPLMGGLSWAPENAGELDMITVDKYTAVLKSYP 249          
BLAST of mRNA_E-siliculosus-1a_F_contig10644.458.1 vs. uniprot
Match: A0A5D6Y6E5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6E5_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 9.380e-14
Identity = 36/78 (46.15%), Postives = 56/78 (71.79%), Query Frame = 0
Query:    1 NDRHLSIFPQQVVTGAGFPEWRRVRLLLSEDLGQHLRKVRVMHVSRPLMGGLSWAPENTGELDMITVDKYTAVLKSYP 78
            N + ++I    VVTG GFPE R+VR+LLSE    H ++V V+H+SRPL+GG++  PE+  E+D+ T  + TA+L+++P
Sbjct:   68 NGKSVTIQGSHVVTGRGFPEPRKVRILLSEPREVHRQRVTVLHLSRPLVGGVA-LPEDPNEIDVATFRRVTAILRAFP 144          
BLAST of mRNA_E-siliculosus-1a_F_contig10644.458.1 vs. uniprot
Match: A0A833TGC7_PHYIN (Regulator of chromosome condensation (RCC1) repeat n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TGC7_PHYIN)

HSP 1 Score: 73.9 bits (180), Expect = 1.270e-13
Identity = 35/78 (44.87%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    1 NDRHLSIFPQQVVTGAGFPEWRRVRLLLSEDLGQHLRKVRVMHVSRPLMGGLSWAPENTGELDMITVDKYTAVLKSYP 78
            N + +++    + TG GF + R+VR+LLSE    H ++V V+H+SRPL GGL   PE+  E+D+ T+ KYTA+L+S+P
Sbjct:   68 NGKQVAVLGSHIHTGKGFSDRRQVRILLSEKREIHHQEVTVLHISRPLEGGLE-VPEDPSEIDVATLRKYTAILRSFP 144          
BLAST of mRNA_E-siliculosus-1a_F_contig10644.458.1 vs. uniprot
Match: D0NR99_PHYIT (VPS9 domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NR99_PHYIT)

HSP 1 Score: 73.9 bits (180), Expect = 1.280e-13
Identity = 35/78 (44.87%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    1 NDRHLSIFPQQVVTGAGFPEWRRVRLLLSEDLGQHLRKVRVMHVSRPLMGGLSWAPENTGELDMITVDKYTAVLKSYP 78
            N + +++    + TG GF + R+VR+LLSE    H ++V V+H+SRPL GGL   PE+  E+D+ T+ KYTA+L+S+P
Sbjct:   68 NGKQVAVLGSHIHTGKGFSDRRQVRILLSEKREIHHQEVTVLHISRPLEGGLE-VPEDPSEIDVATLRKYTAILRSFP 144          
BLAST of mRNA_E-siliculosus-1a_F_contig10644.458.1 vs. uniprot
Match: V9F7P2_PHYPR (VPS9 domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=V9F7P2_PHYPR)

HSP 1 Score: 73.9 bits (180), Expect = 1.280e-13
Identity = 35/78 (44.87%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    1 NDRHLSIFPQQVVTGAGFPEWRRVRLLLSEDLGQHLRKVRVMHVSRPLMGGLSWAPENTGELDMITVDKYTAVLKSYP 78
            N + +++    + TG GF + R+VR+LLSE    H ++V V+H+SRPL GGL   PE+  E+D+ T+ KYTA+L+S+P
Sbjct:   68 NGKQVAVLGSHIHTGKGFSDRRQVRILLSEKREIHHQEVTVLHISRPLEGGLE-VPEDPSEIDVATLRKYTAILRSFP 144          
BLAST of mRNA_E-siliculosus-1a_F_contig10644.458.1 vs. uniprot
Match: A0A225UX42_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UX42_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.180e-13
Identity = 34/78 (43.59%), Postives = 53/78 (67.95%), Query Frame = 0
Query:    1 NDRHLSIFPQQVVTGAGFPEWRRVRLLLSEDLGQHLRKVRVMHVSRPLMGGLSWAPENTGELDMITVDKYTAVLKSYP 78
            N + +++    + TG GF + R+VR+LLSE    H ++V V+H+SRPL GG+   PE+  E+D+ T  KYTA+L+S+P
Sbjct:   66 NGKQVAVLGSHIHTGKGFNDQRQVRILLSEKREIHHQEVTVLHISRPLAGGIE-VPEDPSEIDVATFRKYTAILRSFP 142          
BLAST of mRNA_E-siliculosus-1a_F_contig10644.458.1 vs. uniprot
Match: A0A2P4YDT4_9STRA (VPS9 domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YDT4_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 6.090e-13
Identity = 34/78 (43.59%), Postives = 53/78 (67.95%), Query Frame = 0
Query:    1 NDRHLSIFPQQVVTGAGFPEWRRVRLLLSEDLGQHLRKVRVMHVSRPLMGGLSWAPENTGELDMITVDKYTAVLKSYP 78
            N + +++    + TG GF + R+VR+LLSE    H ++V V+H+SRPL GG+   PE+  E+D+ T  KYTA+L+S+P
Sbjct:   69 NGKQVAVLGSHIHTGRGFNDRRQVRILLSEKREIHHQEVTVLHISRPLEGGIE-VPEDPSEIDVATFRKYTAILRSFP 145          
BLAST of mRNA_E-siliculosus-1a_F_contig10644.458.1 vs. uniprot
Match: A0A8K1CEM3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEM3_PYTOL)

HSP 1 Score: 71.6 bits (174), Expect = 8.310e-13
Identity = 35/78 (44.87%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    1 NDRHLSIFPQQVVTGAGFPEWRRVRLLLSEDLGQHLRKVRVMHVSRPLMGGLSWAPENTGELDMITVDKYTAVLKSYP 78
            N + +SI   QV T  GF E R+VR+LLSE    H +++ ++H+SRPL+GG+   PE+  E+D+ T  +YTA+L+S+P
Sbjct:   72 NGKTVSIIGSQVHTRRGFDEPRKVRILLSEQRDVHHQEIMLLHLSRPLIGGIV-LPEDPNEIDLATFRRYTAILRSFP 148          
BLAST of mRNA_E-siliculosus-1a_F_contig10644.458.1 vs. uniprot
Match: A0A6A3J236_9STRA (VPS9 domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3J236_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.010e-12
Identity = 34/78 (43.59%), Postives = 53/78 (67.95%), Query Frame = 0
Query:    1 NDRHLSIFPQQVVTGAGFPEWRRVRLLLSEDLGQHLRKVRVMHVSRPLMGGLSWAPENTGELDMITVDKYTAVLKSYP 78
            N + +++    + TG GF + R+VR+LLSE     L++V V+H+SRPL GG+   PE+  E+D+ T  KYTA+L+S+P
Sbjct:   67 NGKQVAVVGSHIHTGKGFKDRRQVRILLSEKREIQLQEVTVLHISRPLEGGIE-IPEDPSEIDVATFRKYTAILRSFP 143          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10644.458.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5JHA7_9PHAE4.590e-2136.36Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FTN1_ECTSI2.220e-2035.83Similar to hect domain and RLD 4 n=1 Tax=Ectocarpu... [more]
A0A5D6Y6E5_9STRA9.380e-1446.15Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A833TGC7_PHYIN1.270e-1344.87Regulator of chromosome condensation (RCC1) repeat... [more]
D0NR99_PHYIT1.280e-1344.87VPS9 domain-containing protein n=1 Tax=Phytophthor... [more]
V9F7P2_PHYPR1.280e-1344.87VPS9 domain-containing protein n=9 Tax=Phytophthor... [more]
A0A225UX42_9STRA3.180e-1343.59Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A2P4YDT4_9STRA6.090e-1343.59VPS9 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A8K1CEM3_PYTOL8.310e-1344.87Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A3J236_9STRA1.010e-1243.59VPS9 domain-containing protein n=2 Tax=Phytophthor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10644contigE-siliculosus-1a_F_contig10644:354..1400 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10644.458.1mRNA_E-siliculosus-1a_F_contig10644.458.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10644 354..1400 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10644.458.1 ID=prot_E-siliculosus-1a_F_contig10644.458.1|Name=mRNA_E-siliculosus-1a_F_contig10644.458.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=78bp
NDRHLSIFPQQVVTGAGFPEWRRVRLLLSEDLGQHLRKVRVMHVSRPLMG
GLSWAPENTGELDMITVDKYTAVLKSYP
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