mRNA_E-siliculosus-1a_F_contig1064.457.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1064.457.1 vs. uniprot
Match: A0A7S3Y2R5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2R5_HETAK) HSP 1 Score: 47.4 bits (111), Expect = 3.670e-5 Identity = 21/37 (56.76%), Postives = 26/37 (70.27%), Query Frame = 1 Query: 1 MYGSQTGNAQSIAEGVHDGCQKRGLESTLLKCDAWKK 111
MYGSQTGNA+SIA+ +H RG T+ + DAWKK
Sbjct: 16 MYGSQTGNAESIAKDLHASLLARGFACTVTEMDAWKK 52 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1064.457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1064.457.1 >prot_E-siliculosus-1a_F_contig1064.457.1 ID=prot_E-siliculosus-1a_F_contig1064.457.1|Name=mRNA_E-siliculosus-1a_F_contig1064.457.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=66bp MYGSQTGNAQSIAEGVHDGCQKRGLESTLLKCDAWKKVTIQSVCLSIHSLback to top mRNA from alignment at E-siliculosus-1a_F_contig1064:34910..36253+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1064.457.1 ID=mRNA_E-siliculosus-1a_F_contig1064.457.1|Name=mRNA_E-siliculosus-1a_F_contig1064.457.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1344bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1064:34910..36253+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1064:34910..36253+ >mRNA_E-siliculosus-1a_F_contig1064.457.1 ID=mRNA_E-siliculosus-1a_F_contig1064.457.1|Name=mRNA_E-siliculosus-1a_F_contig1064.457.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=396bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1064:34910..36253+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |