prot_E-siliculosus-1a_F_contig10637.451.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig10637.451.1
Unique Name	prot_E-siliculosus-1a_F_contig10637.451.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	221

Homology

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Match: PSBA_ECTSI (Photosystem II protein D1 n=1129 Tax=Eukaryota TaxID=2759 RepID=PSBA_ECTSI)

HSP 1 Score: 436 bits (1122), Expect = 1.420e-152
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0

Query:    1 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 220
            PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILM PFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG
Sbjct:  141 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMRPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 360

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Match: A0A1N7TJI8_9PHAE (Photosystem II protein D1 n=412 Tax=Eukaryota TaxID=2759 RepID=A0A1N7TJI8_9PHAE)

HSP 1 Score: 434 bits (1116), Expect = 1.170e-151
Identity = 213/220 (96.82%), Postives = 219/220 (99.55%), Query Frame = 0

Query:    1 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 220
            PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPV+ IWLT+LG+STMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNE+LPVA+SAPS+VG
Sbjct:  141 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVIAIWLTSLGISTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEVLPVAVSAPSIVG 360

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Match: PSBA_PHATC (Photosystem II protein D1 n=590 Tax=root TaxID=1 RepID=PSBA_PHATC)

HSP 1 Score: 421 bits (1082), Expect = 1.740e-146
Identity = 207/220 (94.09%), Postives = 215/220 (97.73%), Query Frame = 0

Query:    1 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 220
            PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET+E ES NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPVVGIWLTA+GVSTMAFNLNGFNFNQSVVDS+GRVINTWADIINRADLGMEVMHERNAHNFPLDLAS E+LPVA++AP+V G
Sbjct:  141 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTENESTNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVVGIWLTAMGVSTMAFNLNGFNFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLASGEVLPVALTAPAVNG 360

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Match: A0A023JEK8_9STRA (Photosystem II protein D1 n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A023JEK8_9STRA)

HSP 1 Score: 415 bits (1066), Expect = 4.720e-144
Identity = 203/220 (92.27%), Postives = 215/220 (97.73%), Query Frame = 0

Query:    1 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 220
            PWIFVAFSAPVAAA+AVF+VYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET+E ES ++GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPVVGIWLTA+G+STMAFNLNGFNFNQSVVDS+GRVINTWADIINRADLGMEVMHERNAHNFPLDLAS E+LPVA++AP+V G
Sbjct:  141 PWIFVAFSAPVAAAAAVFVVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTENESPDFGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVVGIWLTAMGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLASGEVLPVALTAPAVNG 360

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Match: A0A7S2RD40_9STRA (Photosystem II protein D1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RD40_9STRA)

HSP 1 Score: 412 bits (1059), Expect = 8.300e-143
Identity = 200/220 (90.91%), Postives = 213/220 (96.82%), Query Frame = 0

Query:    1 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 220
            PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET++ ES N GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPV+GIW+TA+G+STMAFNLNGFNFNQSVVDSEGRVINTWADI+NRADLG+EVMHERNAHNFPLDLA+ E+ PVA+SAP+V G
Sbjct:  153 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTDSESTNNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVLGIWITAMGISTMAFNLNGFNFNQSVVDSEGRVINTWADILNRADLGIEVMHERNAHNFPLDLAAGEVFPVAVSAPAVNG 372

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Match: PSBA_CYAM1 (Photosystem II protein D1 n=18 Tax=Eukaryota TaxID=2759 RepID=PSBA_CYAM1)

HSP 1 Score: 408 bits (1049), Expect = 1.820e-141
Identity = 198/218 (90.83%), Postives = 213/218 (97.71%), Query Frame = 0

Query:    1 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSV 218
            PWI VAFSAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGG+LFSAMHGSLVTSSLIRETSE ES+N GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFL AWPVVGIWLTA+G+STMAFNLNGFNFNQSVVDSEGRVINTWADI+NRA+LG+EVMHERNAHNFPLDLASN ++PVA++APSV
Sbjct:  141 PWICVAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGALFSAMHGSLVTSSLIRETSENESLNNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVVGIWLTAIGISTMAFNLNGFNFNQSVVDSEGRVINTWADILNRANLGIEVMHERNAHNFPLDLASNSVVPVALTAPSV 358

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Match: A0A451FLR3_9STRA (Photosystem II protein D1 n=179 Tax=Eukaryota TaxID=2759 RepID=A0A451FLR3_9STRA)

HSP 1 Score: 408 bits (1048), Expect = 2.580e-141
Identity = 199/218 (91.28%), Postives = 211/218 (96.79%), Query Frame = 0

Query:    1 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSV 218
            PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET +  S NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPVVGIWLTALG+STMAFNLNGFNFNQSVVDS+GRVINTWADI+NRA+LG+EVMHERNAHNFPLDLA + +LPVA++AP+V
Sbjct:  141 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETEDGVSANYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAIWPVVGIWLTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGIEVMHERNAHNFPLDLAVSNVLPVALNAPAV 358

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Match: A0A0D6KAE8_9CYAN (RnfA-Nqr electron transport subunit (Fragment) n=5 Tax=Cyanobacteria TaxID=1117 RepID=A0A0D6KAE8_9CYAN)

HSP 1 Score: 403 bits (1035), Expect = 3.470e-141
Identity = 194/218 (88.99%), Postives = 210/218 (96.33%), Query Frame = 0

Query:    1 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSV 218
            PWI +AFSAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHM GVAGVFGGSLFSAMHGSLVTSSL+RET+E ES NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLAAWPVVGIW TALG+STMAFNLNGFNFNQSV+DS+GRV+NTWADIINRA+LGMEVMHERNAHNFPLDLA+ E  PVA++AP++
Sbjct:   18 PWICLAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTENESQNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVIDSQGRVVNTWADIINRANLGMEVMHERNAHNFPLDLAAGEQAPVALTAPAI 235

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Match: A0A448Z6F3_9STRA (32 kDa thylakoid membrane protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448Z6F3_9STRA)

HSP 1 Score: 409 bits (1050), Expect = 1.020e-140
Identity = 200/219 (91.32%), Postives = 210/219 (95.89%), Query Frame = 0

Query:    1 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVV 219
            PWIFVAFSAPVAAA+AVFL YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHP HMAGVAGVFGGSLFSAMHGSLVTSSLIRET+E ES N GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPV+GIW TA+GVSTMAFNLNGFNFNQ+V+DSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLAS EILPVA+ AP++V
Sbjct:  201 PWIFVAFSAPVAAATAVFLTYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPLHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTENESTNNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVLGIWCTAMGVSTMAFNLNGFNFNQAVIDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASGEILPVAMEAPAIV 419

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Match: A0A3C1RYZ8_9CYAN (Photosystem II q(B) protein (Fragment) n=1 Tax=Planktothrix sp. UBA8407 TaxID=2055758 RepID=A0A3C1RYZ8_9CYAN)

HSP 1 Score: 401 bits (1030), Expect = 1.510e-140
Identity = 192/220 (87.27%), Postives = 208/220 (94.55%), Query Frame = 0

Query:    1 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 220
            PWI VA+SAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHM GVAGVFGGSLFSAMHGSLVTSSL+RET+EVES+NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHF L AWPV+GIW TALGVSTMAFNLNGFNFNQS++DS GRVINTWAD++NRA+LGMEVMHERNAHNFPLDLAS E  PVA+ AP + G
Sbjct:   12 PWICVAYSAPVAAAAAVFLIYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTEVESLNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFLLGAWPVIGIWFTALGVSTMAFNLNGFNFNQSIIDSTGRVINTWADVLNRANLGMEVMHERNAHNFPLDLASGESAPVALVAPQING 231

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
PSBA_ECTSI	1.420e-152	99.55	Photosystem II protein D1 n=1129 Tax=Eukaryota Tax...	[more]
A0A1N7TJI8_9PHAE	1.170e-151	96.82	Photosystem II protein D1 n=412 Tax=Eukaryota TaxI...	[more]
PSBA_PHATC	1.740e-146	94.09	Photosystem II protein D1 n=590 Tax=root TaxID=1 R...	[more]
A0A023JEK8_9STRA	4.720e-144	92.27	Photosystem II protein D1 n=4 Tax=Bacillariophyta ...	[more]
A0A7S2RD40_9STRA	8.300e-143	90.91	Photosystem II protein D1 n=1 Tax=Rhizochromulina ...	[more]
PSBA_CYAM1	1.820e-141	90.83	Photosystem II protein D1 n=18 Tax=Eukaryota TaxID...	[more]
A0A451FLR3_9STRA	2.580e-141	91.28	Photosystem II protein D1 n=179 Tax=Eukaryota TaxI...	[more]
A0A0D6KAE8_9CYAN	3.470e-141	88.99	RnfA-Nqr electron transport subunit (Fragment) n=5...	[more]
A0A448Z6F3_9STRA	1.020e-140	91.32	32 kDa thylakoid membrane protein n=2 Tax=Pseudo-n...	[more]
A0A3C1RYZ8_9CYAN	1.510e-140	87.27	Photosystem II q(B) protein (Fragment) n=1 Tax=Pla...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036854	Photosystem II protein D1/D2 superfamily	GENE3D	1.20.85.10		coord: 2..156 e-value: 1.4E-24 score: 88.6
IPR036854	Photosystem II protein D1/D2 superfamily	SUPERFAMILY	81483	Bacterial photosystem II reaction centre, L and M subunits	coord: 1..203
IPR000484	Photosynthetic reaction centre, L/M	PFAM	PF00124	Photo_RC	coord: 1..181 e-value: 1.2E-55 score: 188.5
IPR000484	Photosynthetic reaction centre, L/M	PANTHER	PTHR33149	FAMILY NOT NAMED	coord: 1..213
IPR000484	Photosynthetic reaction centre, L/M	PROSITE	PS00244	REACTION_CENTER	coord: 51..77
None	No IPR available	PANTHER	PTHR33149:SF11		coord: 1..213
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..14
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 32..48
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 60..84
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 49..59
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 130..155
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..31
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 85..129
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 156..220
None	No IPR available	TMHMM	TMhelix		coord: 57..79
None	No IPR available	TMHMM	TMhelix		coord: 130..152
None	No IPR available	TMHMM	TMhelix		coord: 2..24

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig10637	contig	E-siliculosus-1a_F_contig10637:1708..2370 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig10637.451.1	mRNA_E-siliculosus-1a_F_contig10637.451.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig10637 1708..2370 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10637.451.1 ID=prot_E-siliculosus-1a_F_contig10637.451.1|Name=mRNA_E-siliculosus-1a_F_contig10637.451.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=221bp
PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEH
NILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFG
QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGV
STMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFP
LDLASNEILPVAISAPSVVG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000484	Photo_RC_L/M
IPR036854	Photo_II_D1/D2_sf