prot_E-siliculosus-1a_F_contig10612.438.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10612.438.1
Unique Nameprot_E-siliculosus-1a_F_contig10612.438.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length176
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10612.438.1 vs. uniprot
Match: D8LLG5_ECTSI (DEAD/DEAH box helicase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG5_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 4.780e-77
Identity = 136/156 (87.18%), Postives = 140/156 (89.74%), Query Frame = 0
Query:   18 RYRFDPLRALEYLKSLPIYEDQAVYSETLPGRAGEYEDTLRPLHPEYPPPHTLGPESLSNWQRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRE 173
            + RFDPLRALEYLKSLPIYEDQAVYSETLPGR+GEYEDTLRPLHPE         E      RLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVI+AIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLS+RVRPMTLDGDTPFRE
Sbjct:   94 KLRFDPLRALEYLKSLPIYEDQAVYSETLPGRSGEYEDTLRPLHPEL----KAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIDAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSQRVRPMTLDGDTPFRE 245          
BLAST of mRNA_E-siliculosus-1a_F_contig10612.438.1 vs. uniprot
Match: A0A6H5KP27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP27_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 8.310e-76
Identity = 138/161 (85.71%), Postives = 139/161 (86.34%), Query Frame = 0
Query:   13 DTTVVRYRFDPLRALEYLKSLPIYEDQAVYSETLPGRAGEYEDTLRPLHPEYPPPHTLGPESLSNWQRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRE 173
            D    + RFDPLRALEYLKSLPIYEDQAVYSETLPGRAGEYEDT RPLHPE         E      RLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLK LVGASPYLSERVRPMTLDGDTPFRE
Sbjct:  273 DGAAEKLRFDPLRALEYLKSLPIYEDQAVYSETLPGRAGEYEDTKRPLHPEV----KAALERSKGVARLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKGLVGASPYLSERVRPMTLDGDTPFRE 429          
BLAST of mRNA_E-siliculosus-1a_F_contig10612.438.1 vs. uniprot
Match: A0A7S2WFF7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFF7_9STRA)

HSP 1 Score: 124 bits (311), Expect = 2.390e-33
Identity = 76/137 (55.47%), Postives = 90/137 (65.69%), Query Frame = 0
Query:   31 KSLPIYEDQAVYSETLPGRAGEYEDTLRPLHPEYPPPHTLGPESLSNWQRLFKHQALAIDAAAA-GRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLD 166
            K LP Y DQ ++ ETLP RAGE+ + L  L  E  P      +      RLF+HQA AIDAA   G HVALST TSSGKSV FNV V+  +V  +PDAVA+YLFPTKALAQDQL S + L+G SP L   V P+T+D
Sbjct:    1 KGLPFYRDQVMHVETLPPRAGEFVE-LSDLAVEIAPCVLEALQKSKGISRLFRHQADAIDAAVGHGMHVALSTGTSSGKSVAFNVPVLHRLV-EQPDAVAIYLFPTKALAQDQLGSFQGLIGGSPALESSVLPLTVD 135          
BLAST of mRNA_E-siliculosus-1a_F_contig10612.438.1 vs. uniprot
Match: F2TYE6_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TYE6_SALR5)

HSP 1 Score: 129 bits (325), Expect = 1.450e-31
Identity = 78/172 (45.35%), Postives = 108/172 (62.79%), Query Frame = 0
Query:    1 TKNKAYNDFTQNDTTVVRYRFDPLRALEYLKSLPIYEDQAVYSETLPGRAGEYEDTLRPLHPEYPPPHTLGPESLSNWQRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFR 172
            T +  Y ++T +       +FDP   L++L  LP+ +  +++ ETLP RA  + +  RPL    P  HTL    +   QRLF HQA  ++AA  G HV +STATSSGKS+V+++  +EA++    + VALY+FPTKALAQDQLRSL+E VGA  +L + VR   LD DTP R
Sbjct:  235 TASVQYTNYTGDYRATPPAQFDPKEILDHLLRLPLAKGHSLHVETLPARAPVFGELERPL--PSPLQHTLADLGI---QRLFSHQAEGVNAARDGAHVMISTATSSGKSLVYHLPTMEALLSDPHNTVALYIFPTKALAQDQLRSLREFVGAG-WLGDAVRADCLDADTPAR 400          
BLAST of mRNA_E-siliculosus-1a_F_contig10612.438.1 vs. uniprot
Match: A0A835ZL03_9STRA (DEAD/DEAH box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL03_9STRA)

HSP 1 Score: 110 bits (276), Expect = 4.960e-27
Identity = 55/94 (58.51%), Postives = 74/94 (78.72%), Query Frame = 0
Query:   80 RLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRE 173
            R +KHQA+ I+A  AG+H+A+STATSSGKSVVF V V++A++   P+AVAL++FPTKALAQDQLRS++ L+ A  +L+  +    LDGDTPF E
Sbjct:    1 RFYKHQAVGINAVVAGQHLAISTATSSGKSVVFTVPVLQALLTGEPNAVALFVFPTKALAQDQLRSMRALLAADDHLNAAITCGCLDGDTPFAE 94          
BLAST of mRNA_E-siliculosus-1a_F_contig10612.438.1 vs. uniprot
Match: A0A2M7KNY8_9BACT (Uncharacterized protein n=1 Tax=Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20 TaxID=1973912 RepID=A0A2M7KNY8_9BACT)

HSP 1 Score: 110 bits (276), Expect = 5.140e-25
Identity = 70/152 (46.05%), Postives = 91/152 (59.87%), Query Frame = 0
Query:   22 DPLRALEYLKSLPIYEDQAVYSETLPGRAGEYEDTLRPLHPEYPPPHTLGPESLSNWQRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRE 173
            D    +E LK+ P Y  Q V+ E LPGR  +Y +   PLHP       LG + +   +RL++HQ  A+  A AGRHV + TAT+SGK++ +N  VIEAI+  R    ALYLFPTKALAQDQLR L EL      L   ++  T DGDTP ++
Sbjct:    4 DCANLVEELKAAPDYNGQIVHHEILPGRRAKYAELDPPLHPSLA--EALGRQGI---KRLYQHQVEALTLARAGRHVMVVTATASGKTLCYNAPVIEAILADRGTR-ALYLFPTKALAQDQLRKLNEL-----DLFPTLKAATYDGDTPAKD 144          
BLAST of mRNA_E-siliculosus-1a_F_contig10612.438.1 vs. uniprot
Match: A0A8J9S2L8_9CHLO (Probable ATP-dependent helicase hrq1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S2L8_9CHLO)

HSP 1 Score: 110 bits (274), Expect = 1.050e-24
Identity = 67/149 (44.97%), Postives = 97/149 (65.10%), Query Frame = 0
Query:   23 PLRALEYLKSLPIYEDQAVYSETLPGRAGEYEDTLRPLHPEYPPPHTLGPESLSNWQRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTL-DGDTP 170
            P   L +L+++  Y+DQ V++E +P RA +Y +   PL    P    L    +++   LF HQA AIDAA AG+HV + T+T+SGKS+ +N+ ++EA+V   P A ALY+FPTKALAQDQLR+LKEL  A+    ++   + + DGDTP
Sbjct:  605 PEAFLAHLRTVSWYKDQIVHTEQIPARAAQYSEPAAPL--SSPVRAALSARGVTH---LFTHQAQAIDAARAGKHVVVCTSTASGKSLCYNLPILEALVRD-PQATALYMFPTKALAQDQLRALKELCAAA--FGDKAPCIDIYDGDTP 745          
BLAST of mRNA_E-siliculosus-1a_F_contig10612.438.1 vs. uniprot
Match: A0A0L0G3V6_9EUKA (Helicase ATP-binding domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G3V6_9EUKA)

HSP 1 Score: 108 bits (271), Expect = 2.220e-24
Identity = 67/143 (46.85%), Postives = 89/143 (62.24%), Query Frame = 0
Query:   27 LEYLKSLPIYEDQAVYSETLPGRAGEYEDTLRPLHPEYPPPHTLGPESLSNWQRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDT 169
            L +LKSLP Y  Q  + E +P RA ++ +T     P          + +S  +RL+ HQA AI  ++AG HV L T+TSSGKS+ +N+ V++AIV   P  +ALYLFPTKALAQDQ R+LK+L  A   L  RV+  T DGDT
Sbjct:  453 LAHLKSLPFYHGQIAHVEHIPARAAKFSETDIDEDPNIGWSVADAVKCVSKIERLYTHQAHAIAHSSAGNHVVLCTSTSSGKSLAYNIPVLQAIVDD-PTTMALYLFPTKALAQDQQRALKKLT-AHDTLCNRVKVATFDGDT 593          
BLAST of mRNA_E-siliculosus-1a_F_contig10612.438.1 vs. uniprot
Match: A0A7V2CKQ6_9BACT (DEAD/DEAH box helicase (Fragment) n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7V2CKQ6_9BACT)

HSP 1 Score: 105 bits (263), Expect = 4.750e-24
Identity = 65/135 (48.15%), Postives = 82/135 (60.74%), Query Frame = 0
Query:   36 YEDQAVYSETLPGRAGEYEDTLRPLHPEYPPPHTLGPESLSNWQRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTP 170
            Y  Q    E LP R   Y     PLHP       L  E +   + L+ HQA AIDA AAGR+V + T T+SGK++ +N+ V+++++   P+A ALYLFPTKALAQDQL +LK L  A   LS  VRP T DGDTP
Sbjct:   16 YRGQIAAVEELPARPARYAPPQTPLHPVLR--QMLRAEGI---EELYLHQARAIDALAAGRNVVVVTGTASGKTMCYNLPVLQSLL-ESPEARALYLFPTKALAQDQLGTLKRLAAADLILSGTVRPATYDGDTP 144          
BLAST of mRNA_E-siliculosus-1a_F_contig10612.438.1 vs. uniprot
Match: A0A5A8CYB9_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CYB9_CAFRO)

HSP 1 Score: 107 bits (267), Expect = 8.440e-24
Identity = 70/165 (42.42%), Postives = 99/165 (60.00%), Query Frame = 0
Query:    7 NDFTQNDTTVVRYRFDPLRALEYLKSL-PIYEDQAVYSETLPGRAGEYEDTLRPLHPEYPPP-HTLGPESLSNWQRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDT 169
            N  ++ D ++V     P+ +     SL P Y DQ  +  T+  R  ++ D  RP+HP      H  G        + F+HQ+LAIDAA AG+HV +ST+TSSGKS+VF+V V + ++  R  AVA+ +FPTKALAQDQLR+++E    S  L+  VR  TLDGD+
Sbjct:  191 NGPSKPDLSMVELTLRPVGSSMQRSSLRPWYVDQLRHVHTILPRPAKFRDVERPVHPAIRMAMHARG------ITKFFEHQSLAIDAALAGKHVVISTSTSSGKSLVFSVPVFDRLLRDRA-AVAILIFPTKALAQDQLRAVREFCRGSATLASAVRAATLDGDS 348          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10612.438.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLG5_ECTSI4.780e-7787.18DEAD/DEAH box helicase domain-containing protein n... [more]
A0A6H5KP27_9PHAE8.310e-7685.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WFF7_9STRA2.390e-3355.47Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
F2TYE6_SALR51.450e-3145.35Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A835ZL03_9STRA4.960e-2758.51DEAD/DEAH box helicase n=1 Tax=Tribonema minus Tax... [more]
A0A2M7KNY8_9BACT5.140e-2546.05Uncharacterized protein n=1 Tax=Armatimonadetes ba... [more]
A0A8J9S2L8_9CHLO1.050e-2444.97Probable ATP-dependent helicase hrq1 n=1 Tax=Cocco... [more]
A0A0L0G3V6_9EUKA2.220e-2446.85Helicase ATP-binding domain-containing protein n=1... [more]
A0A7V2CKQ6_9BACT4.750e-2448.15DEAD/DEAH box helicase (Fragment) n=1 Tax=Phycisph... [more]
A0A5A8CYB9_CAFRO8.440e-2442.42Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 83..151
e-value: 1.1E-10
score: 41.6
NoneNo IPR availableGENE3D3.40.50.300coord: 64..175
e-value: 2.2E-15
score: 58.5
NoneNo IPR availablePANTHERPTHR24031:SF643coord: 80..157
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 80..157
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 70..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10612contigE-siliculosus-1a_F_contig10612:490..2260 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10612.438.1mRNA_E-siliculosus-1a_F_contig10612.438.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10612 490..2260 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10612.438.1 ID=prot_E-siliculosus-1a_F_contig10612.438.1|Name=mRNA_E-siliculosus-1a_F_contig10612.438.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=176bp
TKNKAYNDFTQNDTTVVRYRFDPLRALEYLKSLPIYEDQAVYSETLPGRA
GEYEDTLRPLHPEYPPPHTLGPESLSNWQRLFKHQALAIDAAAAGRHVAL
STATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKELV
GASPYLSERVRPMTLDGDTPFREVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom