prot_E-siliculosus-1a_F_contig106.431.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig106.431.1
Unique Nameprot_E-siliculosus-1a_F_contig106.431.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length156
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig106.431.1 vs. uniprot
Match: D7FL86_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL86_ECTSI)

HSP 1 Score: 276 bits (707), Expect = 1.390e-93
Identity = 154/156 (98.72%), Postives = 154/156 (98.72%), Query Frame = 0 
Query:    1 MPSVLRGTGEKQNVQPLTDIETFQDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWPKCGGESLGSKVR 156
            MPSVLR TGEKQNVQPLTDIETFQDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWPKCGGESLGSK R
Sbjct:    1 MPSVLRETGEKQNVQPLTDIETFQDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWPKCGGESLGSKAR 156
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BLAST of mRNA_E-siliculosus-1a_F_contig106.431.1 vs. uniprot
Match: A0A6H5KTC9_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC9_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 9.440e-71
Identity = 115/146 (78.77%), Postives = 117/146 (80.14%), Query Frame = 0 
Query:   24 QDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXX-------------SRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWPKCGGESLGSKVR 156
            +DVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLR                             SRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWF+VDECDVDGGDDMWPKCGGESLGSKVR
Sbjct:  131 EDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRQDGFVFANYVVAALVRVFRLLKXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFVVDECDVDGGDDMWPKCGGESLGSKVR 276
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BLAST of mRNA_E-siliculosus-1a_F_contig106.431.1 vs. uniprot
Match: D8LJT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT9_ECTSI)

HSP 1 Score: 230 bits (587), Expect = 2.960e-67
Identity = 130/131 (99.24%), Postives = 131/131 (100.00%), Query Frame = 0 
Query:   24 QDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWPKCGGESLGSK 154
            +DVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWPKCGGESLGSK
Sbjct:  176 EDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWPKCGGESLGSK 306
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig106.431.1 vs. uniprot
Match: A0A2D4BDQ3_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDQ3_PYTIN)

HSP 1 Score: 52.4 bits (124), Expect = 6.480e-5
Identity = 43/119 (36.13%), Postives = 70/119 (58.82%), Query Frame = 0 
Query:   24 QDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFIT-----TVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVD 137
            +D+L+  R  IA++YV+TWF PD++ ++P   + G  +      +V SL+    +RXXXXXXXXXXXX    +RK+  V     ++    RL +++G+++   H+L C W +V   D D
Sbjct:  165 EDMLITDRYLIAKRYVTTWFLPDLISSLPTEYIFGGVMDGSHDKSVVSLKLTRVIRXXXXXXXXXXXXLRQFARKIEDV---LEIDAVGARLSQVIGQVLLVTHILACFWHLVGYSDDD 280
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig106.431.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FL86_ECTSI1.390e-9398.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTC9_9PHAE9.440e-7178.77Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D8LJT9_ECTSI2.960e-6799.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2D4BDQ3_PYTIN6.480e-536.13Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.70coord: 19..142
e-value: 4.8E-6
score: 28.3
NoneNo IPR availablePANTHERPTHR10217:SF435POTASSIUM VOLTAGE-GATED CHANNEL PROTEIN EAGcoord: 24..143
NoneNo IPR availablePANTHERPTHR10217VOLTAGE AND LIGAND GATED POTASSIUM CHANNELcoord: 24..143
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 77..109
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 132..156
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..76
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..52
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 33..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig106contigE-siliculosus-1a_F_contig106:83357..84519 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig106.431.1mRNA_E-siliculosus-1a_F_contig106.431.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig106 83357..84519 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig106.431.1 ID=prot_E-siliculosus-1a_F_contig106.431.1|Name=mRNA_E-siliculosus-1a_F_contig106.431.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=156bp
MPSVLRGTGEKQNVQPLTDIETFQDVLVYKRATIARKYVSTWFGPDVLGT
VPFASLIGLFITTVDSLQSVNFLRLVRVFRLLKLMRILRLSRKMAKVDFS
RRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWPKCGGES
LGSKVR
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