prot_E-siliculosus-1a_F_contig10591.423.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10591.423.1
Unique Nameprot_E-siliculosus-1a_F_contig10591.423.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length257
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10591.423.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 1.360e-15
Identity = 41/49 (83.67%), Postives = 43/49 (87.76%), Query Frame = 0 
Query:    1 HFFNTSHIFITFQGKYEEAGPLYERSLAIREKALGPDHPAVATALNNRA 49
            H  NT H+FITFQGKYEEAGPLYERSLAIREK LGPDHP VA +LNNRA
Sbjct:  786 HSSNTHHVFITFQGKYEEAGPLYERSLAIREKVLGPDHPDVAQSLNNRA 834
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10591.423.1 vs. uniprot
Match: A0A6H5JPL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL8_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.140e-10
Identity = 36/50 (72.00%), Postives = 42/50 (84.00%), Query Frame = 0 
Query:    5 TSHIFITFQGKYEEAGPLYERSLAIREKALGPDHPAVATALNNRAGLLES 54
            +S + +TFQGK EEAG L+ RSLAIREKALGPDHP VAT+LNN + LLES
Sbjct:   72 SSRLPVTFQGKPEEAGALFNRSLAIREKALGPDHPDVATSLNNLSCLLES 121
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10591.423.1 vs. uniprot
Match: UPI0013D29528 (tetratricopeptide repeat protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D29528)

HSP 1 Score: 65.5 bits (158), Expect = 1.920e-10
Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 0 
Query:   13 QGKYEEAGPLYERSLAIREKALGPDHPAVATALNNRAGL 51
            QGKYEEA PLY+R+L IRE  LGPDHP+VAT LNN AGL
Sbjct:    4 QGKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10591.423.1 vs. uniprot
Match: A0A6H5K4D0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D0_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 2.360e-10
Identity = 36/51 (70.59%), Postives = 40/51 (78.43%), Query Frame = 0 
Query:    4 NTSHIFITFQGKYEEAGPLYERSLAIREKALGPDHPAVATALNNRAGLLES 54
            N   + +  QGKY+EAG LYERSLAIREKALGPDHP VA +LNN A LLES
Sbjct:  822 NNRALLLKAQGKYDEAGKLYERSLAIREKALGPDHPDVAQSLNNWAVLLES 872
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10591.423.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 8.220e-10
Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 0 
Query:    9 FITFQGKYEEAGPLYERSLAIREKALGPDHPAVATALNNRAGLLES 54
            F+ FQGKY++AGPLY+RSLAI EK  GPDHP VA +LNNRA LL +
Sbjct:  412 FLIFQGKYDQAGPLYDRSLAILEKVHGPDHPDVAQSLNNRAELLRA 457
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10591.423.1 vs. uniprot
Match: A0A6H5K5H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 1.390e-9
Identity = 32/41 (78.05%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:   13 QGKYEEAGPLYERSLAIREKALGPDHPAVATALNNRAGLLE 53
            QG Y EA PLYERS AIR+K LGPDHP VAT LNNRAGLL+
Sbjct:  205 QGNYAEAKPLYERSQAIRKKVLGPDHPDVATVLNNRAGLLK 245
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10591.423.1 vs. uniprot
Match: D8LCT1_ECTSI (Tetratricopeptide repeat family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCT1_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 2.200e-9
Identity = 32/42 (76.19%), Postives = 36/42 (85.71%), Query Frame = 0 
Query:   13 QGKYEEAGPLYERSLAIREKALGPDHPAVATALNNRAGLLES 54
            QG Y+EAG LYERSLAIREKALGP+HPA AT L N+AGLL +
Sbjct:    4 QGNYKEAGRLYERSLAIREKALGPEHPAFATTLTNQAGLLRN 45
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10591.423.1 vs. uniprot
Match: A0A6H5KWM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWM2_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 2.310e-9
Identity = 31/42 (73.81%), Postives = 36/42 (85.71%), Query Frame = 0 
Query:   13 QGKYEEAGPLYERSLAIREKALGPDHPAVATALNNRAGLLES 54
            QG Y++AG LY+RSLAIREK LGPDHP VA +LNNRAGLL +
Sbjct:  129 QGNYDQAGMLYKRSLAIREKVLGPDHPNVAQSLNNRAGLLSA 170
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10591.423.1 vs. uniprot
Match: A0A6H5J6Q8_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6Q8_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 2.940e-9
Identity = 30/47 (63.83%), Postives = 40/47 (85.11%), Query Frame = 0 
Query:    6 SHIFITFQGKYEEAGPLYERSLAIREKALGPDHPAVATALNNRAGLL 52
            +H++++FQGK +EAGPLY+R++ I E ALGP+H  VATALNNRA LL
Sbjct:  574 THLYVSFQGKLDEAGPLYDRAIRIWEAALGPEHSQVATALNNRARLL 620
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10591.423.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 3.380e-9
Identity = 32/41 (78.05%), Postives = 36/41 (87.80%), Query Frame = 0 
Query:   13 QGKYEEAGPLYERSLAIREKALGPDHPAVATALNNRAGLLE 53
            QGKY EA PLYERSLAI+EK LGP+HP VAT+L+NRA LLE
Sbjct:  693 QGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLLE 733
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10591.423.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJK0_9PHAE1.360e-1583.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPL8_9PHAE1.140e-1072.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0013D295281.920e-1076.92tetratricopeptide repeat protein n=1 Tax=Desulfoba... [more]
A0A6H5K4D0_9PHAE2.360e-1070.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIY6_9PHAE8.220e-1069.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5H9_9PHAE1.390e-978.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCT1_ECTSI2.200e-976.19Tetratricopeptide repeat family n=1 Tax=Ectocarpus... [more]
A0A6H5KWM2_9PHAE2.310e-973.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J6Q8_9PHAE2.940e-963.83NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G722_ECTSI3.380e-978.05NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 57..75
score: 35.26
coord: 159..179
score: 50.0
coord: 194..215
score: 36.82
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 161..194
e-value: 0.11
score: 21.7
coord: 42..75
e-value: 0.015
score: 24.5
NoneNo IPR availablePFAMPF13374TPR_10coord: 98..123
e-value: 1.8E-6
score: 27.6
NoneNo IPR availablePFAMPF13424TPR_12coord: 11..74
e-value: 5.2E-19
score: 68.3
coord: 220..256
e-value: 7.8E-9
score: 35.7
coord: 159..213
e-value: 2.4E-11
score: 43.7
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 98..134
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 12..81
coord: 141..253
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 12..81
coord: 98..134
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 141..253
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 138..257
e-value: 3.7E-39
score: 136.5
coord: 96..137
e-value: 2.9E-11
score: 45.0
coord: 7..90
e-value: 1.7E-29
score: 104.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 155..256
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 13..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10591contigE-siliculosus-1a_F_contig10591:897..2227 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10591.423.1mRNA_E-siliculosus-1a_F_contig10591.423.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10591 897..2227 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10591.423.1 ID=prot_E-siliculosus-1a_F_contig10591.423.1|Name=mRNA_E-siliculosus-1a_F_contig10591.423.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=257bp
HFFNTSHIFITFQGKYEEAGPLYERSLAIREKALGPDHPAVATALNNRAG
LLESQGKYEEAEPLYERSQAIREKVLGPEHPAQYSLLAITTPLPLVPRYD
DAAPLYQRALAIDEKVLGPDHPDVATDLNNWAGLLSILEPLYIRTIAIGE
KALGPEHPDLATWLNNRAGLLMSQMKYDEAEPLYRRSLAIDEKVYGPDHP
EVATDLNNWARLLSICSSAYDEAGPLYERSLTIREKVYGPDHPAVATALN
NRALLLE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat
IPR002151Kinesin_light