mRNA_E-siliculosus-1a_F_contig1059.420.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_E-siliculosus-1a_F_contig1059.420.1 vs. uniprot
Match: A0A398CV69_9BACL (Uncharacterized protein n=1 Tax=Cohnella faecalis TaxID=2315694 RepID=A0A398CV69_9BACL)

HSP 1 Score: 275 bits (702), Expect = 4.750e-83
Identity = 146/351 (41.60%), Postives = 207/351 (58.97%), Query Frame = 1

Query:    1 MSFTCPKLSDNSAEGSPAVPGIFISAGLQHYKEGGTPVDLSYHIGTDNLACWEDGSRDNGSLTCDQTRMAAWTRALVSVQNPTKFELTYVDKWSDSDSEPSR-VWSKLPVSVPPGG-RRIVTLNNNDRAGLYYRAM--LGDQEKGYVTMSFTCPKASHNSAEGSSFETGV-LLDAGLQKYERSGTPVNFTYIVGQKNLAGWNSGTSDSGIKACDQTQLNG-RAKIVVRNDTEYEVVSTHHW-DESGGSEGWYFNP--DGPIPSKAQKLLVLSTSDRAGIYYVQNDLEYHLSFTCPKLSHNSAEGSDDSGLQHYEDTGTPVLFEYKLGTKNLACWRNGKSDNGHIVVSKTKV 1026
            MSFTCPKLS NSAEGSP   G F+SAGLQ Y E G P++L+Y +GT N ACW  GS ++G + C QT      +  + ++N   ++L +   W+D+ +  S   W+  P  VPP G +R + L ++D+AGL+ + +   G  + G+  MSF        SAEGS  ++   L+ AGLQ+Y R     +  Y +G+ N A WN G S+ G   C+QT     RA I + N     +    +W D  GG+  WY  P  D  +P   +++ VL  +DRAG+Y+  N +E+H+SFTCPK+S NSAEGS  +GLQ Y  +GTPV F Y++GT NLACW +G S++G  V  +T V
Sbjct:    1 MSFTCPKLSSNSAEGSPG-SGSFVSAGLQAYSESGHPLNLTYSVGTTNAACWSSGSSNDGEIKCSQTEFED-AKLTIRIKNENNYQLKFCGYWNDNSNGASNWYWAPGPRDVPPPGCKRTIYLLDDDKAGLFLKVLDTNGLDQLGFANMSFQ--NGGTPSAEGSPDDSNNGLVAAGLQRYHRDVVAASLEYQIGESNRACWNHGDSNDGSTTCNQTTFKDKRALIFIENTIPETLTFVKYWNDNKGGAGNWYIEPNADDTVPPDCKRIFVLKDNDRAGLYFKMNYIEFHMSFTCPKMSSNSAEGSPHTGLQTYSGSGTPVTFTYRVGTPNLACWSSGTSNSGKTVCPQTLV 347

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BLAST of mRNA_E-siliculosus-1a_F_contig1059.420.1 vs. uniprot
Match: A0A0N8Q4B4_9GAMM (Uncharacterized protein n=1 Tax=Pseudoalteromonas sp. P1-9 TaxID=1710354 RepID=A0A0N8Q4B4_9GAMM)

HSP 1 Score: 199 bits (506), Expect = 8.140e-54
Identity = 103/215 (47.91%), Postives = 132/215 (61.40%), Query Frame = 1

Query:    1 MSFTCPKLSDNSAEGSPAVPGIFISAGLQHYKEGGTPVDLSYHIGTDNLACWEDGSRDNGSLTCDQTRMAAWTRALVSVQNPTKFELTYVDKWSDSDSEPSRVWSKLPVSVPPGGRRIVTLNNNDRAGLYYRAMLGDQEKGYVTMSFTCPKASHNSAEGSSFETGVLLDAGLQKYERSGTPVNFTYIVGQKNLAGWNSGTSDSGIKACDQTQLNG 645
            MSFTCPK S NSAEGSP   G+ I +GLQ Y E GTPV  +Y+IGT N+ACW DG+ D+ +  C QT +  W R LVSV N     L     W +        W+K P S+P GG+ I  LN+NDRAGL +  +L +     + M+FTCPK+S NSAEGS         AGLQ+Y   GTPVN +Y++ + N A W+SGTS++G   C QT L+G
Sbjct:   71 MSFTCPKSSSNSAEGSPNSEGVLIQSGLQRYNEHGTPVSFTYNIGTPNMACWSDGTTDDANPVCPQTTLEEWARVLVSVDNTKAVPLHLESTWQNGP------WTKEPTSIPAGGKGIFLLNDNDRAGLQF--LLNNNIP--INMAFTCPKSSSNSAEGSPL-------AGLQQYAEHGTPVNLSYVISEVNQACWDSGTSNNGKVECSQTLLSG 268

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BLAST of mRNA_E-siliculosus-1a_F_contig1059.420.1 vs. uniprot
Match: A0A398CPC6_9BACL (Uncharacterized protein n=1 Tax=Cohnella faecalis TaxID=2315694 RepID=A0A398CPC6_9BACL)

HSP 1 Score: 168 bits (425), Expect = 8.840e-44
Identity = 88/212 (41.51%), Postives = 122/212 (57.55%), Query Frame = 1

Query:  406 GDQEKGYVTMSFTCPKASHNSAEGSSFETGV-LLDAGLQKYERSGTPVNFTYIVGQKNLAGWNSGTSDSGIKACDQTQLNG-RAKIVVRNDTEYEVVSTHHW-DESGGSEGWYFNP--DGPIPSKAQKLLVLSTSDRAGIYYVQNDLEYHLSFTCPKLSHNSAEGSDDSGLQHYEDTGTPVLFEYKLGTKNLACWRNGKSDNGHIVVSKTKV 1026
            G  + G+  MSF        SAEGS  ++   L+ AGLQ+Y R     +  Y +G+ N A WN G S+ G   C+QT     RA I + N     +    +W D  GG+  WY  P  D  +P   +++ VL  +DRAG+Y+  N +E+H+SFTCPK+S NSAEGS  +GLQ Y  +GTPV F Y++GT NLACW +G S++G  V  +T V
Sbjct:    6 GLDQLGFANMSFQ--NGGTPSAEGSPDDSNNGLVAAGLQRYHRDVVAASLEYQIGESNRACWNHGDSNDGSTTCNQTTFKDKRALIFIENTIPETLTFVKYWNDNKGGAGNWYIEPNADDTVPPDCKRIFVLKDNDRAGLYFKMNYIEFHMSFTCPKMSSNSAEGSPHTGLQTYSGSGTPVTFTYRVGTPNLACWSSGTSNSGKTVCPQTLV 215

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BLAST of mRNA_E-siliculosus-1a_F_contig1059.420.1 vs. uniprot
Match: A0A398CPS6_9BACL (Uncharacterized protein n=1 Tax=Cohnella faecalis TaxID=2315694 RepID=A0A398CPS6_9BACL)

HSP 1 Score: 105 bits (262), Expect = 4.020e-24
Identity = 51/114 (44.74%), Postives = 70/114 (61.40%), Query Frame = 1

Query:    1 MSFTCPKLSDNSAEGSPAVPGIFISAGLQHYKEGGTPVDLSYHIGTDNLACWEDGSRDNGSLTCDQTRMAAWTRALVSVQNPTKFELTYVDKWSDSDSEPSR-VWSKLPVSVPP 339
            MSFTCPKLS NSAEGSP   G F+SAGLQ Y E G P++L+Y +GT N ACW  GS ++G + C QT      +  + ++N   ++L +   W+D+ +  S   W+  P  VPP
Sbjct:    1 MSFTCPKLSSNSAEGSPG-SGSFVSAGLQAYSESGHPLNLTYSVGTTNAACWSSGSSNDGEIKCSQTEFED-AKLTIRIKNENNYQLKFCGYWNDNSNGASNWYWAPGPRDVPP 112

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BLAST of mRNA_E-siliculosus-1a_F_contig1059.420.1 vs. uniprot
Match: A0A1J5UND5_9GAMM (Uncharacterized protein n=4 Tax=Bathymodiolus thermophilus thioautotrophic gill symbiont TaxID=2360 RepID=A0A1J5UND5_9GAMM)

HSP 1 Score: 64.7 bits (156), Expect = 4.140e-9
Identity = 46/119 (38.66%), Postives = 60/119 (50.42%), Query Frame = 1

Query:  646 RAKIVVRNDTEYE--VVSTHHWDE--SGGSEGWYFNPDGPIPSKAQKLLVLSTSDRAGIYYVQNDL--EYHLSFTCPKLSHNSAEGSDDSGLQHYEDTGTPVLFEYKLGTKNLACWRNG 984
            R K+ + N+T     V+ T+   E  SG   G    P   I        V S++DR    +   D    + +  TCPK SHNSA G  +SGLQ Y  TGTPV FE+ LG+ +LA W NG
Sbjct:    9 RVKVKIINNTHRNEVVICTNVRCEKLSGLKAGDKIQPGKTIE------CVSSSNDRIFFEFRGEDSGDAFMMGCTCPKSSHNSACGYGNSGLQCYSRTGTPVSFEFHLGSPDLADWNNG 121

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BLAST of mRNA_E-siliculosus-1a_F_contig1059.420.1 vs. uniprot
Match: A0A1J5UIK0_9GAMM (Uncharacterized protein n=4 Tax=Bathymodiolus thermophilus thioautotrophic gill symbiont TaxID=2360 RepID=A0A1J5UIK0_9GAMM)

HSP 1 Score: 62.8 bits (151), Expect = 2.060e-8
Identity = 34/81 (41.98%), Postives = 44/81 (54.32%), Query Frame = 1

Query:  748 GPIPSKAQKLLVLSTSDRAGIYY---VQNDLEYHLSFTCPKLSHNSAEGSDDSGLQHYEDTGTPVLFEYKLGTKNLACWRN 981
            G +     K+ V STS+    +     Q    + +  TCPK S+NSA G  +SGLQ Y+DTGTPV F + LG  N A W N
Sbjct:   42 GDLIQSGDKISVTSTSNNRIFFEFEGAQTKYLFQIGCTCPKSSNNSACGYGNSGLQCYQDTGTPVSFVFHLGKTNKADWDN 122

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BLAST of mRNA_E-siliculosus-1a_F_contig1059.420.1 vs. uniprot
Match: UPI00168A1AD4 (hypothetical protein n=1 Tax=Pseudanabaena sp. FACHB-1050 TaxID=2692857 RepID=UPI00168A1AD4)

HSP 1 Score: 58.9 bits (141), Expect = 7.110e-8
Identity = 30/52 (57.69%), Postives = 35/52 (67.31%), Query Frame = 1

Query:  442 TCPKASHNSAEGSSFETGVLLDAGLQKYERSGTPVNFTYIVGQKNLAGWNSG 597
            TCP++S NSA GS        +AGLQ YER GTPV FT+I+GQ N A WN G
Sbjct:    2 TCPRSSRNSACGS-------YNAGLQPYERRGTPVTFTFILGQPNEADWNHG 46

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BLAST of mRNA_E-siliculosus-1a_F_contig1059.420.1 vs. uniprot
Match: A0A2A5D9Y6_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2A5D9Y6_9BACT)

HSP 1 Score: 60.8 bits (146), Expect = 7.640e-8
Identity = 36/82 (43.90%), Postives = 47/82 (57.32%), Query Frame = 1

Query:  367 NNDRAGLYYRAMLGDQEKGYV-TMSFTCPKASHNSAEGSSFETGVLLDAGLQKYERSGTPVNFTYIVGQKNLAGWNSGTSDS 609
            +NDR    + A+ G+   G +     TCPK+SHNSA+G    TG      LQKY+  GTPV FT+  G  N+A W  G+SDS
Sbjct:   41 DNDRCYAQFEALKGNVGTGVLYQFGMTCPKSSHNSADGYDGLTG------LQKYKEDGTPVVFTFNFGDVNIASW--GSSDS 114

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1059.420.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1059.420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 8

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POSITION

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Match Name	E-value	Identity	Description
A0A398CV69_9BACL	4.750e-83	41.60	Uncharacterized protein n=1 Tax=Cohnella faecalis ...	[more]
A0A0N8Q4B4_9GAMM	8.140e-54	47.91	Uncharacterized protein n=1 Tax=Pseudoalteromonas ...	[more]
A0A398CPC6_9BACL	8.840e-44	41.51	Uncharacterized protein n=1 Tax=Cohnella faecalis ...	[more]
A0A398CPS6_9BACL	4.020e-24	44.74	Uncharacterized protein n=1 Tax=Cohnella faecalis ...	[more]
A0A1J5UND5_9GAMM	4.140e-9	38.66	Uncharacterized protein n=4 Tax=Bathymodiolus ther...	[more]
A0A1J5UIK0_9GAMM	2.060e-8	41.98	Uncharacterized protein n=4 Tax=Bathymodiolus ther...	[more]
UPI00168A1AD4	7.110e-8	57.69	hypothetical protein n=1 Tax=Pseudanabaena sp. FAC...	[more]
A0A2A5D9Y6_9BACT	7.640e-8	43.90	Uncharacterized protein n=1 Tax=Planctomycetes bac...	[more]