prot_E-siliculosus-1a_F_contig10589.419.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10589.419.1
Unique Nameprot_E-siliculosus-1a_F_contig10589.419.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length151
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10589.419.1 vs. uniprot
Match: D7G0A4_ECTSI (Rab8A, RAB family GTPase n=2 Tax=Phaeophyceae TaxID=2870 RepID=D7G0A4_ECTSI)

HSP 1 Score: 293 bits (751), Expect = 1.160e-99
Identity = 148/150 (98.67%), Postives = 148/150 (98.67%), Query Frame = 0
Query:    1 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRATGNVNLNAQASKKKTGCC 150
            DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPN GSRA GNVNLNAQASKKKTGCC
Sbjct:   56 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRAAGNVNLNAQASKKKTGCC 205          
BLAST of mRNA_E-siliculosus-1a_F_contig10589.419.1 vs. uniprot
Match: A0A6H5KYQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYQ5_9PHAE)

HSP 1 Score: 290 bits (742), Expect = 9.360e-99
Identity = 146/150 (97.33%), Postives = 148/150 (98.67%), Query Frame = 0
Query:    1 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRATGNVNLNAQASKKKTGCC 150
            DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSF+SIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPN GSRA+GNVNLNAQASKKK GCC
Sbjct:   25 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFSSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRASGNVNLNAQASKKKAGCC 174          
BLAST of mRNA_E-siliculosus-1a_F_contig10589.419.1 vs. uniprot
Match: A0A836CCB2_9STRA (Rab8A, rab family GTPase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCB2_9STRA)

HSP 1 Score: 251 bits (642), Expect = 4.770e-83
Identity = 128/151 (84.77%), Postives = 138/151 (91.39%), Query Frame = 0
Query:    1 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRATGNVNLNAQASK-KKTGCC 150
            D+KR+KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSF SIRNWVAQIQQHADV VNKILIGNKCD+D +REVS EEGAQLAAEYGIQFFETSAKNDINVEKGFIT+AREVK+RLMADG +QG+R  GNV L+A A   KK+ CC
Sbjct:   56 DTKRVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQSIRNWVAQIQQHADVHVNKILIGNKCDIDNEREVSTEEGAQLAAEYGIQFFETSAKNDINVEKGFITVAREVKNRLMADGGSQGARTQGNVALSAPAKGGKKSSCC 206          
BLAST of mRNA_E-siliculosus-1a_F_contig10589.419.1 vs. uniprot
Match: A0A7S2V1J6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1J6_9STRA)

HSP 1 Score: 219 bits (558), Expect = 2.010e-70
Identity = 113/152 (74.34%), Postives = 125/152 (82.24%), Query Frame = 0
Query:    1 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRATGN--VNLNAQASKKKTGCC 150
            D KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+KSFNSIRNW++QIQQHADV VNKIL GNKCDM E+R V+ EEG +LA+EYGI FFE SAKND+NVE  F+TIAREVKDRL+ D    G+ A G   VNL      KK+GCC
Sbjct:   47 DGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRKSFNSIRNWISQIQQHADVHVNKILCGNKCDMSEERAVTTEEGQKLASEYGIGFFEASAKNDVNVETSFVTIAREVKDRLLLD---VGTMARGGERVNLGNAKPAKKSGCC 195          
BLAST of mRNA_E-siliculosus-1a_F_contig10589.419.1 vs. uniprot
Match: K3WPX9_GLOUD (Uncharacterized protein n=28 Tax=Oomycota TaxID=4762 RepID=K3WPX9_GLOUD)

HSP 1 Score: 219 bits (557), Expect = 3.580e-70
Identity = 111/150 (74.00%), Postives = 125/150 (83.33%), Query Frame = 0
Query:    1 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRATGNVNLNAQASKKKTGCC 150
            D+K++KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF SIRNWV QIQQHADV VNKILIGNKCDM +D+ VS EEG  LA EYG++FFETSAKN+INVE GFI IAREVK+RLM +G   G     NVNL+A+ +  K GCC
Sbjct:   56 DNKKVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHVNKILIGNKCDMTDDKVVSTEEGQALADEYGVKFFETSAKNNINVESGFIEIAREVKNRLMEEG---GPHKKENVNLSAKPAAPKKGCC 202          
BLAST of mRNA_E-siliculosus-1a_F_contig10589.419.1 vs. uniprot
Match: A0A4D9D279_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D279_9STRA)

HSP 1 Score: 214 bits (544), Expect = 3.510e-68
Identity = 111/151 (73.51%), Postives = 124/151 (82.12%), Query Frame = 0
Query:    1 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRATGNVNL-NAQASKKKTGCC 150
            D +RIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF SIRNWV QIQQHADV VNKILIGNKCDM   R VS EEG  LA ++GIQFFETSAKNDINVEK F+TIAREVK+R++ DG   G RATG   + +A+ S +   CC
Sbjct:   56 DGRRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVSTEEGQSLANDFGIQFFETSAKNDINVEKSFVTIAREVKNRMLVDG---GPRATGGKAIVDAKRSNEAKKCC 203          
BLAST of mRNA_E-siliculosus-1a_F_contig10589.419.1 vs. uniprot
Match: A0A7S4M6F2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M6F2_9STRA)

HSP 1 Score: 213 bits (543), Expect = 5.480e-68
Identity = 110/152 (72.37%), Postives = 128/152 (84.21%), Query Frame = 0
Query:    1 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRATGNVNLN--AQASKKKTGCC 150
            D KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF SIRNWV+QIQQHADV VNKIL+GNKCDM +++ VS EEGA+LA E+GI+F+E SAKNDINVE+ FI IAR+VKDRL+ADG   G  A   ++LN   Q S++  GCC
Sbjct:   56 DGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVSQIQQHADVHVNKILVGNKCDMLDEKVVSTEEGAKLAKEFGIEFWECSAKNDINVEQAFIGIARDVKDRLVADGGG-GPAANKGLSLNKPGQGSQRNRGCC 206          
BLAST of mRNA_E-siliculosus-1a_F_contig10589.419.1 vs. uniprot
Match: A0A6T5Q365_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5Q365_HETAK)

HSP 1 Score: 213 bits (542), Expect = 7.780e-68
Identity = 109/147 (74.15%), Postives = 122/147 (82.99%), Query Frame = 0
Query:    1 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRATGNVNLNAQASKKKT 147
            D KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SFNSIRNWV+QIQQHADV VNKILIGNKCDM ++R V+ EEG +LAAEYGIQFFETSAKNDI VE+ F+T+AREVK+RL+ D      +    VNL  Q S  K+
Sbjct:   56 DGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRNSFNSIRNWVSQIQQHADVHVNKILIGNKCDMKDERVVTTEEGQKLAAEYGIQFFETSAKNDIQVEESFVTVAREVKERLINDVDR---KTDARVNLQTQKSSSKS 199          
BLAST of mRNA_E-siliculosus-1a_F_contig10589.419.1 vs. uniprot
Match: A0A7S2RB79_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RB79_9STRA)

HSP 1 Score: 212 bits (540), Expect = 1.420e-67
Identity = 110/150 (73.33%), Postives = 125/150 (83.33%), Query Frame = 0
Query:    1 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRATGNVNLNAQASKKKTGCC 150
            D+KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF SIRNWV+QIQQHADV VNKILIGNKCDM++ R VS +EG +LA EYGIQFFETSAKNDI V+ GF+ IAREVK+RL+ADGP   +  +G  N + Q +K K   C
Sbjct:   55 DNKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRTSFTSIRNWVSQIQQHADVHVNKILIGNKCDMEDQRMVSFDEGKKLAQEYGIQFFETSAKNDIEVDSGFVAIAREVKNRLIADGPT--AVRSGIHNPSHQNNKSKGRAC 202          
BLAST of mRNA_E-siliculosus-1a_F_contig10589.419.1 vs. uniprot
Match: A0A6U3X2X0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3X2X0_9STRA)

HSP 1 Score: 210 bits (535), Expect = 9.020e-67
Identity = 105/150 (70.00%), Postives = 121/150 (80.67%), Query Frame = 0
Query:    1 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNQGSRATGNVNLNAQASKKKTGCC 150
            D KR+KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF SIRNW++QIQQHADV VNKIL+GNKCDM  ++ VS EEG +LA E+GI F+E SAKNDINVE+ FI+IAR+VKDRL+ DG   G      VNL +     K GCC
Sbjct:   59 DGKRVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQHADVHVNKILVGNKCDMLHEKVVSTEEGQKLAKEFGIDFWECSAKNDINVEQSFISIARDVKDRLVTDGG--GGPTNSRVNLKSPQGSTKKGCC 206          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10589.419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0A4_ECTSI1.160e-9998.67Rab8A, RAB family GTPase n=2 Tax=Phaeophyceae TaxI... [more]
A0A6H5KYQ5_9PHAE9.360e-9997.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CCB2_9STRA4.770e-8384.77Rab8A, rab family GTPase n=2 Tax=Tribonema minus T... [more]
A0A7S2V1J6_9STRA2.010e-7074.34Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3WPX9_GLOUD3.580e-7074.00Uncharacterized protein n=28 Tax=Oomycota TaxID=47... [more]
A0A4D9D279_9STRA3.510e-6873.51Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S4M6F2_9STRA5.480e-6872.37Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A6T5Q365_HETAK7.780e-6874.15Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2RB79_9STRA1.420e-6773.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6U3X2X0_9STRA9.020e-6770.00Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 95..117
score: 43.27
coord: 60..73
score: 43.7
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 1..120
e-value: 6.0E-15
score: 65.7
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..120
e-value: 1.9E-50
score: 183.6
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 1..120
e-value: 9.6E-6
score: -44.1
NoneNo IPR availableGENE3D3.40.50.300coord: 1..150
e-value: 7.7E-50
score: 171.0
NoneNo IPR availablePANTHERPTHR24073:SF978coord: 1..129
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 1..129
NoneNo IPR availablePROSITEPS51419RABcoord: 1..150
score: 26.428
IPR001806Small GTPasePFAMPF00071Rascoord: 1..118
e-value: 1.6E-45
score: 154.6
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 1..111
e-value: 1.8E-18
score: 64.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10589contigE-siliculosus-1a_F_contig10589:123..2310 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10589.419.1mRNA_E-siliculosus-1a_F_contig10589.419.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10589 123..2310 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10589.419.1 ID=prot_E-siliculosus-1a_F_contig10589.419.1|Name=mRNA_E-siliculosus-1a_F_contig10589.419.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=151bp
DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNW
VAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSA
KNDINVEKGFITIAREVKDRLMADGPNQGSRATGNVNLNAQASKKKTGCC
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase