prot_E-siliculosus-1a_F_contig1057.410.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1057.410.1
Unique Nameprot_E-siliculosus-1a_F_contig1057.410.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length451
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1057.410.1 vs. uniprot
Match: D8LN52_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN52_ECTSI)

HSP 1 Score: 904 bits (2337), Expect = 0.000e+0
Identity = 445/450 (98.89%), Postives = 449/450 (99.78%), Query Frame = 0 
Query:    1 MNKATWVIAIDIACEFVPFTDILSDVILLIAVWPRTAVIAPDDVEGCGERALWYLALSFTVVGTLVDLFPEMLLVSEIALHPSALTSPGSMGTLLRLVFSDGKPVVVFAATEEFEKPLAPPLLAIRDSLRRRLSSVATAFFLRDGCGASSPKWTYAGLVGVLVGGELLTAIGACLFLRIEFGWPALISLLASLLALLISVRCHMRRVGEKTLHLCHESATGNGGRLFEFLLPGPVTLTRFLLAVPVWPMLLVYSEGASFWPFSMASRGDHSLPPSEESLWANPWDWFRVAVPSLSRSDNDSPLSYVYWAIVPHLLWTLVSAVWVGLLGAANLVCWYFGHAEDWSAHSWGVYFSSQQSPFSVWSSRLQSALGMGFTAWAAREFRRLLAFSAALAAVVVQGYRRGACLEQEWAFVFAVAAWWIAVLIGHAARKKNIFKPLNEAAGPAVADRW 450
            MNKATWVIAIDIACEFVPFTDILSDVILLIAVWPRTAVIAPDDVEGCGERALWYLALSFTVVGTLVDLFPEMLLVSEIALHPS LTSPGSMGTLLRLVFSDGKPVVVFAATEEFEKPLAPPLLAIRDSLRRRLSSVATAFFLRDGCGASSPKWTYAGLVGVLVGGELLTAIGACLFLRIEFGWPALISLLASLLALLISVRCHMRRVGEKTLHLCHESATGNGGRLFEFLLPGPVTLTRFLLAVPVWPMLLVYSEGASFWPFSMASRGDHSLPPSE+SLWANPWDWFRVAVPSLSRSDNDSPLSYVYWAIVPHLLWTLVSAVWVGLLGAANLVCWYFGHAEDWSAHSWGVYFSSQ+SPFSVWS+RLQSALGMGFTAWAAREFRRLLAFSAALAAVVVQGYRRGACLEQEWAFVFAVAAWWIAVLIGHAARKKN+FKPLNEAAGPAVADRW
Sbjct:    1 MNKATWVIAIDIACEFVPFTDILSDVILLIAVWPRTAVIAPDDVEGCGERALWYLALSFTVVGTLVDLFPEMLLVSEIALHPSVLTSPGSMGTLLRLVFSDGKPVVVFAATEEFEKPLAPPLLAIRDSLRRRLSSVATAFFLRDGCGASSPKWTYAGLVGVLVGGELLTAIGACLFLRIEFGWPALISLLASLLALLISVRCHMRRVGEKTLHLCHESATGNGGRLFEFLLPGPVTLTRFLLAVPVWPMLLVYSEGASFWPFSMASRGDHSLPPSEDSLWANPWDWFRVAVPSLSRSDNDSPLSYVYWAIVPHLLWTLVSAVWVGLLGAANLVCWYFGHAEDWSAHSWGVYFSSQESPFSVWSARLQSALGMGFTAWAAREFRRLLAFSAALAAVVVQGYRRGACLEQEWAFVFAVAAWWIAVLIGHAARKKNMFKPLNEAAGPAVADRW 450
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BLAST of mRNA_E-siliculosus-1a_F_contig1057.410.1 vs. uniprot
Match: A0A6H5JN14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN14_9PHAE)

HSP 1 Score: 681 bits (1758), Expect = 9.790e-246
Identity = 336/341 (98.53%), Postives = 337/341 (98.83%), Query Frame = 0 
Query:    1 MNKATWVIAIDIACEFVPFTDILSDVILLIAVWPRTAVIAPDDVEGCGERALWYLALSFTVVGTLVDLFPEMLLVSEIALHPSALTSPGSMGTLLRLVFSDGKPVVVFAATEEFEKPLAPPLLAIRDSLRRRLSSVATAFFLRDGCGASSPKWTYAGLVGVLVGGELLTAIGACLFLRIEFGWPALISLLASLLALLISVRCHMRRVGEKTLHLCHESATGNGGRLFEFLLPGPVTLTRFLLAVPVWPMLLVYSEGASFWPFSMASRGDHSLPPSEESLWANPWDWFRVAVPSLSRSDNDSPLSYVYWAIVPHLLWTLVSAVWVGLLGAANLVCWYFGHAE 341
            MNK TWVIAIDIACEFVPFTDILSDVILLIAVWPRTAVIAPDDVEGCGERALWYLALSFTVVGTLVDLFPEMLLVSEIALHPS LTSPGSMGTLLRLVFSDGKPVVVFAATEEFEKPLAPPLLAIRDSLRRRLSSVATAFFL DGCGASSPKWTYAGLVGVLVGGELLTAIGACLFLRIEFGWPALISLLASLLALLISVRCHMRRVGEKTLHLCHESATGNGGRLFEFLLPGPVTLTRFLLAVPVWPMLLVYSEGASFWPFSMASRGDHSLPPS ESLWANPWDWFRVAVPSLSRSDNDSP+SYVYWAIVPHLLWTLVSAVWVGLLGAANLVCWYFGHAE
Sbjct:    1 MNKTTWVIAIDIACEFVPFTDILSDVILLIAVWPRTAVIAPDDVEGCGERALWYLALSFTVVGTLVDLFPEMLLVSEIALHPSVLTSPGSMGTLLRLVFSDGKPVVVFAATEEFEKPLAPPLLAIRDSLRRRLSSVATAFFLGDGCGASSPKWTYAGLVGVLVGGELLTAIGACLFLRIEFGWPALISLLASLLALLISVRCHMRRVGEKTLHLCHESATGNGGRLFEFLLPGPVTLTRFLLAVPVWPMLLVYSEGASFWPFSMASRGDHSLPPSGESLWANPWDWFRVAVPSLSRSDNDSPMSYVYWAIVPHLLWTLVSAVWVGLLGAANLVCWYFGHAE 341
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1057.410.1 vs. uniprot
Match: A0A6H5JNH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNH5_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 2.280e-65
Identity = 104/110 (94.55%), Postives = 106/110 (96.36%), Query Frame = 0 
Query:  341 EDWSAHSWGVYFSSQQSPFSVWSSRLQSALGMGFTAWAAREFRRLLAFSAALAAVVVQGYRRGACLEQEWAFVFAVAAWWIAVLIGHAARKKNIFKPLNEAAGPAVADRW 450
            EDWSAHSWGVYFSSQ+SPFSVWS RLQSALGMGFTAWAAREFRRLLAFSAALAAVVVQGYRRGACLEQEWAFVFAVAAWWI VLIGHAARKKNIFKPLN+AA  AVADRW
Sbjct:   10 EDWSAHSWGVYFSSQESPFSVWSWRLQSALGMGFTAWAAREFRRLLAFSAALAAVVVQGYRRGACLEQEWAFVFAVAAWWIVVLIGHAARKKNIFKPLNDAASAAVADRW 119
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1057.410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LN52_ECTSI0.000e+098.89Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5JN14_9PHAE9.790e-24698.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNH5_9PHAE2.280e-6594.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 205..304
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 339..357
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 430..450
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 305..338
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 410..429
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 405..409
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 379..384
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 385..404
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 358..378
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 180..184
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 185..204
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..179
NoneNo IPR availableTMHMMTMhelixcoord: 410..429
NoneNo IPR availableTMHMMTMhelixcoord: 181..200
NoneNo IPR availableTMHMMTMhelixcoord: 382..400
NoneNo IPR availableTMHMMTMhelixcoord: 305..327
NoneNo IPR availableTMHMMTMhelixcoord: 240..262
NoneNo IPR availableTMHMMTMhelixcoord: 155..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1057contigE-siliculosus-1a_F_contig1057:12437..16143 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1057.410.1mRNA_E-siliculosus-1a_F_contig1057.410.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1057 10587..16194 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1057.410.1 ID=prot_E-siliculosus-1a_F_contig1057.410.1|Name=mRNA_E-siliculosus-1a_F_contig1057.410.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=451bp
MNKATWVIAIDIACEFVPFTDILSDVILLIAVWPRTAVIAPDDVEGCGER
ALWYLALSFTVVGTLVDLFPEMLLVSEIALHPSALTSPGSMGTLLRLVFS
DGKPVVVFAATEEFEKPLAPPLLAIRDSLRRRLSSVATAFFLRDGCGASS
PKWTYAGLVGVLVGGELLTAIGACLFLRIEFGWPALISLLASLLALLISV
RCHMRRVGEKTLHLCHESATGNGGRLFEFLLPGPVTLTRFLLAVPVWPML
LVYSEGASFWPFSMASRGDHSLPPSEESLWANPWDWFRVAVPSLSRSDND
SPLSYVYWAIVPHLLWTLVSAVWVGLLGAANLVCWYFGHAEDWSAHSWGV
YFSSQQSPFSVWSSRLQSALGMGFTAWAAREFRRLLAFSAALAAVVVQGY
RRGACLEQEWAFVFAVAAWWIAVLIGHAARKKNIFKPLNEAAGPAVADRW
*
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