Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1057.409.1 vs. uniprot
Match:
D8LN53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN53_ECTSI)
HSP 1 Score: 170 bits (431), Expect = 3.440e-51
Identity = 94/119 (78.99%), Postives = 98/119 (82.35%), Query Frame = 1
Query: 184 MIGFASNNALLTVQFALLLAMFIKPMLVPQGSTQSGGAVYRRVVIRNIVCTVGIACAYVITTVVVVLAYVSTPSDTNKMCGLFITGPLLNRAPLMSQAAVLGHITPSINICVTLCLTEI 540
MIGFASNNALLTVQF LLLAMFIKPML+PQG TQSGGAVYRRVV+RNIVCTVGIACAYVITTVVVVLA+VSTPSDTNK AAVLGHITPSINICVTLCLTE+
Sbjct: 1 MIGFASNNALLTVQFVLLLAMFIKPMLLPQGGTQSGGAVYRRVVVRNIVCTVGIACAYVITTVVVVLAHVSTPSDTNK-------------------AAVLGHITPSINICVTLCLTEV 100
BLAST of mRNA_E-siliculosus-1a_F_contig1057.409.1 vs. uniprot
Match:
A0A6H5JPA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA0_9PHAE)
HSP 1 Score: 172 bits (435), Expect = 1.150e-49
Identity = 100/158 (63.29%), Postives = 112/158 (70.89%), Query Frame = 1
Query: 91 HLVVS--LLGVDIPG------TACFNRSNEETETGEVGDMIGFASNNALLTVQFALLLAMFIKPMLVPQGSTQSGGAVYRRVVIRNIVCTVGIACAYVITTVVVVLAYVSTPSDTNKMCGLFITGPLLNRAPLMSQAAVLGHITPSINICVTLCLTEI 540
+L VS +LG+ PG TACFN EETET EVGD+ GFA NN LLTVQ+ LLLAMFIKPMLV G+TQSGGAVYRRVVIRNIVCT+GIACAYVITTVVVVLA +S+ DT+K AA +G I PSINICVTLCLTE+
Sbjct: 105 YLPVSGTVLGLSFPGEVNSEGTACFNSYGEETETREVGDVAGFAGNNVLLTVQYVLLLAMFIKPMLVSHGNTQSGGAVYRRVVIRNIVCTIGIACAYVITTVVVVLALLSSRPDTDK-------------------AAAVGDIVPSINICVTLCLTEV 243
BLAST of mRNA_E-siliculosus-1a_F_contig1057.409.1 vs. uniprot
Match:
D8LN54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN54_ECTSI)
HSP 1 Score: 141 bits (356), Expect = 1.430e-38
Identity = 76/114 (66.67%), Postives = 84/114 (73.68%), Query Frame = 1
Query: 94 LVVSLLGVDIPG------TACFNRSNEETETGEVGDMIGFASNNALLTVQFALLLAMFIKPMLVPQGSTQSGGAVYRRVVIRNIVCTVGIACAYVITTVVVVLAYVSTPSDTNK 417
+ + LG+ PG TACFN EET+T EVGD+ GFASNN LLTVQ+ LLLAMFIKPMLV QG+TQSGGAVYRRVVIRNIVCT+GIACAYVITT SDTNK
Sbjct: 98 VSATFLGLTFPGEVNSEGTACFNSYREETDTAEVGDVAGFASNNVLLTVQYVLLLAMFIKPMLVSQGNTQSGGAVYRRVVIRNIVCTIGIACAYVITTXXXXXXXXXXXSDTNK 211
BLAST of mRNA_E-siliculosus-1a_F_contig1057.409.1 vs. uniprot
Match:
A0A6H5K249_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K249_9PHAE)
HSP 1 Score: 137 bits (345), Expect = 3.590e-37
Identity = 72/153 (47.06%), Postives = 99/153 (64.71%), Query Frame = 1
Query: 121 IPGTACFNRSNEETETGEVGDMIGFASNNALLTVQFALLLAMFIKPMLVPQGSTQSGGAVYRRVVIRNIVCTVGIACAYVITTVVVVLAYVSTPSDTNKMCGLFITGPLLNRAPLMSQAAVLGHITPSINICVTLCLTEIALPLGFTSCMKSI 579
+ GT C +E E D +GF NN +L +QFALLLA+F+KP+++PQG TQSGGAVYRR+V+RN+ CT+ I Y +TTV+VVL +++T AP +AA L + P+ NI VTLCLTE++LPLGF+SC+K+I
Sbjct: 68 LEGTFCLTLDLQEDEDVTFSDALGFVINNGILIIQFALLLAIFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIAITFTYAVTTVIVVLGFLTT-------------------APGSIKAAQLADLLPTANIFVTLCLTELSLPLGFSSCVKAI 201
BLAST of mRNA_E-siliculosus-1a_F_contig1057.409.1 vs. uniprot
Match:
D8LN45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN45_ECTSI)
HSP 1 Score: 135 bits (339), Expect = 1.450e-36
Identity = 74/163 (45.40%), Postives = 100/163 (61.35%), Query Frame = 1
Query: 94 LVVSLLGVDIP-GTACFNRSNEETETGEVGDMIGFASNNALLTVQFALLLAMFIKPMLVPQGSTQSGGAVYRRVVIRNIVCTVGIACAYVITTVVVVLAYVSTPSDTNKMCGLFITGPLLNRAPLMSQAAVLGHITPSINICVTLCLTEIALPLGFTSCMKSI 579
L + V P G C +E E D +GF NN +L +QF LLLAMF+KP+++PQG QSGGAVYRR+V+RN+ CT+GI Y +TTV+VVL +++T AP +AA L + P+ NI VTLC+TE++LPLGF+SC+KSI
Sbjct: 28 LASQVSSVPSPEGNFCLALDLQENEDVTFSDTLGFVFNNGILVIQFVLLLAMFVKPLMIPQGHIQSGGAVYRRLVMRNVACTIGITFTYAVTTVIVVLGFLTT-------------------APGSIKAAQLADLLPTANIFVTLCVTEMSLPLGFSSCVKSI 171
BLAST of mRNA_E-siliculosus-1a_F_contig1057.409.1 vs. uniprot
Match:
A0A6H5JPA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA3_9PHAE)
HSP 1 Score: 139 bits (350), Expect = 2.100e-36
Identity = 74/153 (48.37%), Postives = 99/153 (64.71%), Query Frame = 1
Query: 121 IPGTACFNRSNEETETGEVGDMIGFASNNALLTVQFALLLAMFIKPMLVPQGSTQSGGAVYRRVVIRNIVCTVGIACAYVITTVVVVLAYVSTPSDTNKMCGLFITGPLLNRAPLMSQAAVLGHITPSINICVTLCLTEIALPLGFTSCMKSI 579
+ GT C +E E D +GF NN +L +QFALLLAMF+KP+++PQG TQSGGAVYRR+V+RN+ CT+ I Y +TTV+VVL +++T AP +AA L + P+ NI VTLCLTEI+LPLGF+SC+K+I
Sbjct: 169 LEGTFCLTLDLKEDEDVTFSDTLGFVINNGILIIQFALLLAMFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIAITFTYAVTTVIVVLGFLTT-------------------APGSIKAAQLADLLPTANIFVTLCLTEISLPLGFSSCVKAI 302
BLAST of mRNA_E-siliculosus-1a_F_contig1057.409.1 vs. uniprot
Match:
D7G2C9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C9_ECTSI)
HSP 1 Score: 113 bits (283), Expect = 9.400e-28
Identity = 70/161 (43.48%), Postives = 90/161 (55.90%), Query Frame = 1
Query: 112 GVDIPGTACFNR--SNEETETGEVGDMIGFASNNALLTVQFALLLAMFIKPMLVPQGSTQSGGAVYRRVVIRNIVCTVGIACAYVITTVVVVLAYVSTPSDTNKMCGLFITGPLLNRAPLMSQAAVLGHITPSINICVTLCLTEIALPLGFTSCMKSINTG 588
G D GT C+N +E + F NN LL VQF LLL +F++PMLV QSGGAVYRRVV+RN+ CT GI +Y ITT+VVV+A + ++NK +A + + + N TLCLTEI LPLGF SCMK+ +TG
Sbjct: 35 GTDPAGTFCYNGIVPTGASELTTSNNAQSFGINNVLLVVQFILLLGLFVQPMLVRVEGAQSGGAVYRRVVLRNVFCTAGIVISYAITTLVVVIALLRESVESNK-------------------SAQIRDVALAANSLGTLCLTEITLPLGFRSCMKACSTG 176
BLAST of mRNA_E-siliculosus-1a_F_contig1057.409.1 vs. uniprot
Match:
A0A6H5JY97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY97_9PHAE)
HSP 1 Score: 114 bits (285), Expect = 9.490e-27
Identity = 65/150 (43.33%), Postives = 91/150 (60.67%), Query Frame = 1
Query: 130 TACFNRSNEETETGEVGD-MIGFASNNALLTVQFALLLAMFIKPMLVPQGSTQSGGAVYRRVVIRNIVCTVGIACAYVITTVVVVLAYVSTPSDTNKMCGLFITGPLLNRAPLMSQAAVLGHITPSINICVTLCLTEIALPLGFTSCMKS 576
T C N + + +T EV D ++G+ SN L +QF LLL +F++P+LV +QSG A+YR VVI+NI CT+ + AY +TTVVV+ A + +D+N A++ ITP +N VTLCLTEIALPLGF+SC K+
Sbjct: 192 TFCVNGYHMDDDTDEVNDNVLGYGSNMGSLVIQFVLLLILFVRPLLVRLEGSQSGEAMYRMVVIKNITCTIAVVTAYAVTTVVVIAALIRQSNDSNT-------------------ASLFADITPLVNQFVTLCLTEIALPLGFSSCWKA 322
BLAST of mRNA_E-siliculosus-1a_F_contig1057.409.1 vs. uniprot
Match:
D7G4H2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H2_ECTSI)
HSP 1 Score: 86.3 bits (212), Expect = 1.940e-18
Identity = 55/139 (39.57%), Postives = 73/139 (52.52%), Query Frame = 1
Query: 187 IGF-ASNNALLTVQFALLLAMFIKPMLVPQGSTQSGGAVYRRVVIRNIVCTVGIACAYVITTVVVVLAYVSTPSDTNKMCGLFITGPLLNRAPLMSQAAVLGHITPSINICVTLCLTEIALPLGFTSCMKSINTGRHSG 600
+GF +NN +L +Q LLLAMF+K +++ QGSTQSG AVYRR+V R+IVCTV + Y TT VVVLA ++ N +IALP GF+SC+KSI GR++G
Sbjct: 1 MGFMTNNNMMLVIQLTLLLAMFVKLIMISQGSTQSGRAVYRRLVARSIVCTVAVVLGYTTTTAVVVLAVLAAFPGNN----------------------------------------QIALPFGFSSCLKSIKAGRNAG 99
BLAST of mRNA_E-siliculosus-1a_F_contig1057.409.1 vs. uniprot
Match:
D8LG96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG96_ECTSI)
HSP 1 Score: 84.0 bits (206), Expect = 1.010e-15
Identity = 45/104 (43.27%), Postives = 66/104 (63.46%), Query Frame = 1
Query: 112 GVDIPGTACFNRSNEETETGEVGDMI-GFASNNALLTVQFALLLAMFIKPMLVPQGSTQSGGAVYRRVVIRNIVCTVGIACAYVITTVVVVLAYVSTPSDTNKM 420
G + T C N N + + EV + I G+ SN L +QF LLL +F++P+LV +QSG A+YRRVVI+NI CT+ + AY +TTVVV+ A + +D+N +
Sbjct: 183 GTNDERTFCINGYNMDDDADEVHENIRGYGSNMGSLIIQFVLLLILFVRPLLVRLEGSQSGEAIYRRVVIKNITCTIAVVTAYAVTTVVVIAALLRQNNDSNTI 286
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1057.409.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 14
0 1 Expect = 3.44e-51 / Id = 78.99 Expect = 1.15e-49 / Id = 63.29 Expect = 1.43e-38 / Id = 66.67 Expect = 3.59e-37 / Id = 47.06 Expect = 1.45e-36 / Id = 45.40 Expect = 2.10e-36 / Id = 48.37 Expect = 9.40e-28 / Id = 43.48 Expect = 9.49e-27 / Id = 43.33 Expect = 1.94e-18 / Id = 39.57 Expect = 1.01e-15 / Id = 43.27 Sequence D8LN53_ECTSI A0A6H5JPA0_9PHAE D8LN54_ECTSI A0A6H5K249_9PHAE D8LN45_ECTSI A0A6H5JPA3_9PHAE D7G2C9_ECTSI A0A6H5JY97_9PHAE D7G4H2_ECTSI D8LG96_ECTSI Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1057.409.1
>prot_E-siliculosus-1a_F_contig1057.409.1 ID=prot_E-siliculosus-1a_F_contig1057.409.1|Name=mRNA_E-siliculosus-1a_F_contig1057.409.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=200bp
LRPGVPGAVSRRKDKRYERQPNSHLLGKGHHLVVSLLGVDIPGTACFNRS back to top mRNA from alignment at E-siliculosus-1a_F_contig1057:4262..6979+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1057.409.1 ID=mRNA_E-siliculosus-1a_F_contig1057.409.1|Name=mRNA_E-siliculosus-1a_F_contig1057.409.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2718bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1057:4262..6979+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)CTACGACCAGGCGTGCCTGGTGCTGTTTCTCGTCGCAAAGACAAGCGTTA
CGAACGGCAACCGAACTCTCACCTGTTGGGAAAAGGGCATCACCTGGTGG
TCTCACTTCTGGGCGTGGATATTCCT GTGAGAAGAGGTGTCAAATTGATC
AGTGATTGCCAGATCTCTCCCTCACATTGGGCACATCATTAGGCCGCCGG
CTTCTCCGTTTGTTACCATACAATATCCCTGGTACTAGCGGTCGTGCGGG
ACGCGAAAGATAGATGGTTTCCCCGACATCCAAGGACAAAGCAGGCGATC
GTGTTAATCCTGCACCAAAAATGACCAGAACCGGCAGCCTCCTCGTGGTA
CACGGTTGTTGCCTTTGGTTGTTGTTCTGCTTGTTTATGTCTTGAAAAAC
GGCTGGTAGCACCCCCCGCGGTGGCCTACAACTCCGTCCAGGAGCAACGG
TTGTGATGATCGTGAATGCCACCACATCGGAGTGCTTTCACCGTATCAGA
CCTCTCGAGAACTCGTTTTGTTCTCGCACGTTGACTGGACCCCCAAATTG
TCCTGGCTTCTTTTACAGGCCGGCGTCGGCAGTTACTGTGGGCCTTACGA
TTCCTGGTGCCGTAAATTCGGAGGTAAGCTCAACCGGAGTTTTCGCTCAA
AAAATATTGCCCTTCAAATCATATCGCCGTTCGCGGTCGTGCGCAACCAC
TTTGCCCCAACTCGCGCTCGAGGCATTGCCCTGCTTGATGATACGACGAA
ACCCACCACGTTTCCGCTCTGATTCGGTCAGGGGACGGCGTGTTTCAACC
GCTCTAATGAGGAGACGGAAACTGGGGAGGTCGGGGATATGATTGGATTC
GCTAGCAACAATGCCTTGTTGACTGTTCAG GTGAGCTGAACGCACACGTT
GCGTGTCGGGCCGTTTCGACGTAGCGCAACAATCAAGGAAACCCGAAACT
CCACAACTACGGTCCTTTGGAGTGGGCAAGGAAGAGAAGATGTGTGGGCG
AGATGTGTACGGGTTGGAGGGCACATCGTTCTCATGTTCAACGCTTATTA
TTATCACTCCGTGTACGCAATCATTGGCGGTACACCCTACGTCTAGGGGC
GACAAAGTGCAGCACCGAAGTTTGAATGCTCGCACGAAAGCACCAGGGCC
ATGTTCCTTGTGCTTGGCACCCTTGCTCACTTCCATTTCTCATACCTTCG
GCCCCACTGTGTCGATCTCAAATGCCCTGCCAGTTCGCGCTGTTGCTGGC
GATGTTCATCAAACCAATGCTTGTGCCACAAGGCAGCACCCAATCCGGCG
GGGCGGTGTACCGCCGGGTGGTGATCCGGAACATTGTGTGCACTGTCGGC
ATCGCCTGCGCGTACGTGATCACGACGGTCGTGGTGGTCCTCGCCTATGT
CAGCACTCCTTCTGATACCAACAAG GTGCGGAATTCTTCTCTACACAGGC
CTTTAACTGCTCCGTACGAGTTTGGTAGACTGGGGGACCGAAGCGCGCAG
GGGGATTTTTCGGTTCTACTACTATCACCTGCGTCGCCCACATTGTACGC
ACTTGTCCGATGCGCAACCGCCCTCACATCTGCTTCTCACCACACCACGT
CCGCAGAGCGGCGTCGTTCTCAGATGTGTGGACTATTCATCACGGGTCCA
TTACTCAACCGTGCCCCCTTGATGTCGCAGGCGGCTGTCCTTGGACACAT
CACACCATCAATCAACATTTGCGTGACCCTGTGCCTGACCGAG GTGGGTG
GTGGCAACGATTTAGTCACTGTTCCTTGCATCAGCTGATTATCTGCGATT
CCGGTGTCGCTGGCTCTTGTCTACGATACAGCCCCGATCCCACCTAGATA
GGCCGAGAAACACCACCGCTGTGCCTGCAAGGCCCACAGGTGCCTCAGCA
AAAACGCTTGGGCCCAAACCTACCTGGTTGTGAAGATACGTGTGCCAAAA
AATATACCTTATCAACATTCAAGCCGGCGGGGTAGGCTAGCGGATTTATG
ACAACACCTCGCAAATCGCCAAAAGCACGCAAGAGAAAGCCACAATCACT
GCTTTGTTCGAACATGACGGACATGATTGAAAGGGACAATGTGGGGTCTT
AAATATCTCAGTAGCTGTGGAGATCTGGCCCCTGTAGCGAAGCGACCAAC
ATACCCGTGTCTATTCTAGGCGTTGGAGAGGAACCCTACTGTAGTACTCT
ACATCGCAAAGCATTCCAGCCTTTTCATTTTTCCCAGAGCTCAATTCAAC
CCCCGGCGCCCTCCCTCCTCGCTCTCGGATATTCAAAAAAATTGAAAGTT
AATGACAACACGAGGGCTGGCGAGAAGCTTTTGATCCCTGTCGCATTTGA
AGTCAGGCGGCACTGTTCACGCCGTGCGTGATCTGAAGTACGGACCTGCA
CCCTATTCGACCATCACGTGCCCGGAATCATTGGCATATAGTTCCAGGGG
CCTTTCCGAGTCCACATTGTAGCCTCCAGCGTTCGTCAGGATTACGGCTT
TTGGGCTTGTTCCACCCTTGAGGAGCGATACTCTTCGAACGGTGGGCAAC
TACACTCGTCGTCGGATTCACATCACAGTCGATCCAACAGGCCACCCAAC
TCACCCGGTTGTGTGCACGTGTCCTTGGTGTTGATACTTTTCCGTGCCAT
TGCAGATTGCCTTGCCTCTCGGATTCACCAGCTGCATGAAGTCCATCAAC
ACTGGCAGGCACTCGGGG back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1057:4262..6979+
>mRNA_E-siliculosus-1a_F_contig1057.409.1 ID=mRNA_E-siliculosus-1a_F_contig1057.409.1|Name=mRNA_E-siliculosus-1a_F_contig1057.409.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1200bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1057:4262..6979+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top