prot_E-siliculosus-1a_F_contig10559.402.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10559.402.1
Unique Nameprot_E-siliculosus-1a_F_contig10559.402.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length275
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10559.402.1 vs. uniprot
Match: D7G159_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G159_ECTSI)

HSP 1 Score: 439 bits (1130), Expect = 1.620e-151
Identity = 235/271 (86.72%), Postives = 239/271 (88.19%), Query Frame = 0 
Query:    1 RVAKYLLETCNVDAGTADSVGYTPLAIAAQGGHVSIVRMLLKRGVAFLGKNAYRDAITGVAMTGNMEMLRELVYVEEGVHLRGAKTSQLMTALHFSAGYCHARATALLLHAGADEGAVDRNGDTPLDVVDTKRSPQVRHGVGRRRVRRMLLQGPAYRALSWMWPASPAVETTPDSAAATGGAALALAGPDAAEPGSAKNAAQLVPYPETEKEWVDSDESFDEAFASAMAGSWRLNLNVAVFRRSRPPPPTCGSEGGSSPVEQRAALVSCFE 271
            +VAKYLLETCNVDAGTADSVGYTPLAI+AQGGHVSIVRMLLKRGVA LGKNAYRDAITGVAMTGNMEMLRELVYVE GVHL GAKTSQLMTALHFSAGYCHARATALLLHAGADEGAVDRNG TPLDVVDTKRSPQ                GPAYRALSW WPAS A ETTPDSAAATGGAALAL G DAAEPGSAK+AAQLVPYPETEKEWVDSDESFDEAFASA+AGSWRLN  VAVFRRSRPPPP CGSEGG   VEQRAALVS FE
Sbjct:  194 KVAKYLLETCNVDAGTADSVGYTPLAISAQGGHVSIVRMLLKRGVALLGKNAYRDAITGVAMTGNMEMLRELVYVEGGVHLLGAKTSQLMTALHFSAGYCHARATALLLHAGADEGAVDRNGGTPLDVVDTKRSPQ----------------GPAYRALSWRWPASSAFETTPDSAAATGGAALALPGLDAAEPGSAKDAAQLVPYPETEKEWVDSDESFDEAFASAVAGSWRLN--VAVFRRSRPPPPPCGSEGGYPAVEQRAALVSRFE 446
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10559.402.1 vs. uniprot
Match: A0A6H5K5E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5E4_9PHAE)

HSP 1 Score: 394 bits (1012), Expect = 9.430e-137
Identity = 207/234 (88.46%), Postives = 210/234 (89.74%), Query Frame = 0 
Query:   39 MLLKRGVAFLGKNAYRDAITGVAMTGNMEMLRELVYVEEGVHLRGAKTSQLMTALHFSAGYCHARATALLLHAGADEGAVDRNGDTPLDVVDTKRSPQVRHGVGRRRVRRMLLQGPAYRALSWMWPASPAVETTPDSAAATGGAALALAGPDAAEPGSAKNAAQLVPYPETEKEWVDSDESFDEAFASAMAGSWRLNLNVAVFRRSRPPPPTCGSEGGSSPVEQRAALVSCFER 272
            MLLKRGVAFLG NAYRDAITGVAMTGN+EMLRELVYVE GVHL GAKTSQLMTALHFSAGYCHARATALLLHAGADEGAVDRNGDTPL+VVDTKRSPQVRHGVGRRRVRRMLLQGPAYRALSW WPASPA ETTPDSAAA GGAALAL G DAAEPGSAKNAAQL+PYPETEKEWVD DESFDEAFASAMAGSWRLNLNVAVFRRSRP              EQRAALVS FER
Sbjct:    1 MLLKRGVAFLGTNAYRDAITGVAMTGNIEMLRELVYVEGGVHLLGAKTSQLMTALHFSAGYCHARATALLLHAGADEGAVDRNGDTPLNVVDTKRSPQVRHGVGRRRVRRMLLQGPAYRALSWRWPASPAFETTPDSAAAMGGAALALPGLDAAEPGSAKNAAQLIPYPETEKEWVDRDESFDEAFASAMAGSWRLNLNVAVFRRSRPXXXXXXXXXXXXXAEQRAALVSRFER 234
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10559.402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G159_ECTSI1.620e-15186.72Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5K5E4_9PHAE9.430e-13788.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 20..52
e-value: 0.052
score: 22.7
coord: 88..117
e-value: 650.0
score: 6.4
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 21..44
e-value: 0.0023
score: 18.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 20..52
score: 10.82
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..53
e-value: 9.3E-9
score: 36.8
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 54..155
e-value: 1.4E-9
score: 39.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..128
NoneNo IPR availablePANTHERPTHR24173FAMILY NOT NAMEDcoord: 1..165
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..126
score: 17.184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10559contigE-siliculosus-1a_F_contig10559:50..1278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10559.402.1mRNA_E-siliculosus-1a_F_contig10559.402.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10559 50..1278 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10559.402.1 ID=prot_E-siliculosus-1a_F_contig10559.402.1|Name=mRNA_E-siliculosus-1a_F_contig10559.402.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=275bp
RVAKYLLETCNVDAGTADSVGYTPLAIAAQGGHVSIVRMLLKRGVAFLGK
NAYRDAITGVAMTGNMEMLRELVYVEEGVHLRGAKTSQLMTALHFSAGYC
HARATALLLHAGADEGAVDRNGDTPLDVVDTKRSPQVRHGVGRRRVRRML
LQGPAYRALSWMWPASPAVETTPDSAAATGGAALALAGPDAAEPGSAKNA
AQLVPYPETEKEWVDSDESFDEAFASAMAGSWRLNLNVAVFRRSRPPPPT
CGSEGGSSPVEQRAALVSCFERCVR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt