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Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10559.402.1 vs. uniprot
Match: D7G159_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G159_ECTSI) HSP 1 Score: 439 bits (1130), Expect = 1.620e-151 Identity = 235/271 (86.72%), Postives = 239/271 (88.19%), Query Frame = 1 Query: 1 RVAKYLLETCNVDAGTADSVGYTPLAIAAQGGHVSIVRMLLKRGVAFLGKNAYRDAITGVAMTGNMEMLRELVYVEEGVHLRGAKTSQLMTALHFSAGYCHARATALLLHAGADEGAVDRNGDTPLDVVDTKRSPQVRHGVGRRRVRRMLLQGPAYRALSWMWPASPAVETTPDSAAATGGAALALAGPDAAEPGSAKNAAQLVPYPETEKEWVDSDESFDEAFASAMAGSWRLNLNVAVFRRSRPPPPTCGSEGGSSPVEQRAALVSCFE 813
+VAKYLLETCNVDAGTADSVGYTPLAI+AQGGHVSIVRMLLKRGVA LGKNAYRDAITGVAMTGNMEMLRELVYVE GVHL GAKTSQLMTALHFSAGYCHARATALLLHAGADEGAVDRNG TPLDVVDTKRSPQ GPAYRALSW WPAS A ETTPDSAAATGGAALAL G DAAEPGSAK+AAQLVPYPETEKEWVDSDESFDEAFASA+AGSWRLN VAVFRRSRPPPP CGSEGG VEQRAALVS FE
Sbjct: 194 KVAKYLLETCNVDAGTADSVGYTPLAISAQGGHVSIVRMLLKRGVALLGKNAYRDAITGVAMTGNMEMLRELVYVEGGVHLLGAKTSQLMTALHFSAGYCHARATALLLHAGADEGAVDRNGGTPLDVVDTKRSPQ----------------GPAYRALSWRWPASSAFETTPDSAAATGGAALALPGLDAAEPGSAKDAAQLVPYPETEKEWVDSDESFDEAFASAVAGSWRLN--VAVFRRSRPPPPPCGSEGGYPAVEQRAALVSRFE 446
BLAST of mRNA_E-siliculosus-1a_F_contig10559.402.1 vs. uniprot
Match: A0A6H5K5E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5E4_9PHAE) HSP 1 Score: 394 bits (1012), Expect = 9.430e-137 Identity = 207/234 (88.46%), Postives = 210/234 (89.74%), Query Frame = 1 Query: 115 MLLKRGVAFLGKNAYRDAITGVAMTGNMEMLRELVYVEEGVHLRGAKTSQLMTALHFSAGYCHARATALLLHAGADEGAVDRNGDTPLDVVDTKRSPQVRHGVGRRRVRRMLLQGPAYRALSWMWPASPAVETTPDSAAATGGAALALAGPDAAEPGSAKNAAQLVPYPETEKEWVDSDESFDEAFASAMAGSWRLNLNVAVFRRSRPPPPTCGSEGGSSPVEQRAALVSCFER 816
MLLKRGVAFLG NAYRDAITGVAMTGN+EMLRELVYVE GVHL GAKTSQLMTALHFSAGYCHARATALLLHAGADEGAVDRNGDTPL+VVDTKRSPQVRHGVGRRRVRRMLLQGPAYRALSW WPASPA ETTPDSAAA GGAALAL G DAAEPGSAKNAAQL+PYPETEKEWVD DESFDEAFASAMAGSWRLNLNVAVFRRSRP EQRAALVS FER
Sbjct: 1 MLLKRGVAFLGTNAYRDAITGVAMTGNIEMLRELVYVEGGVHLLGAKTSQLMTALHFSAGYCHARATALLLHAGADEGAVDRNGDTPLNVVDTKRSPQVRHGVGRRRVRRMLLQGPAYRALSWRWPASPAFETTPDSAAAMGGAALALPGLDAAEPGSAKNAAQLIPYPETEKEWVDRDESFDEAFASAMAGSWRLNLNVAVFRRSRPXXXXXXXXXXXXXAEQRAALVSRFER 234
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 0 |
| Cds size | 825 |
| Model size | 825 |
| Exons | 2 |
| Ec32 ortholog | Ec-08_005370.1 |
| Ec32 ortholog description | Ankyrin repeat-containing domain |
| Hectar predicted targeting category | other localisation |
| Best eggNOG OG | NA|NA|NA |
| Best tax level | Eukaryota |
| COG Functional cat. | G |
| EggNOG OGs | COG0666@1,KOG4177@2759 |
| EggNOG free text desc. | response to abiotic stimulus |
| Seed eggNOG ortholog | 2880.D7G159 |
| Seed ortholog evalue | 1.8e-121 |
| Seed ortholog score | 442.2 |
| Taxonomic scope | Eukaryota |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10559.402.1 >prot_E-siliculosus-1a_F_contig10559.402.1 ID=prot_E-siliculosus-1a_F_contig10559.402.1|Name=mRNA_E-siliculosus-1a_F_contig10559.402.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=275bp
RVAKYLLETCNVDAGTADSVGYTPLAIAAQGGHVSIVRMLLKRGVAFLGK
NAYRDAITGVAMTGNMEMLRELVYVEEGVHLRGAKTSQLMTALHFSAGYC
HARATALLLHAGADEGAVDRNGDTPLDVVDTKRSPQVRHGVGRRRVRRML
LQGPAYRALSWMWPASPAVETTPDSAAATGGAALALAGPDAAEPGSAKNA
AQLVPYPETEKEWVDSDESFDEAFASAMAGSWRLNLNVAVFRRSRPPPPT
CGSEGGSSPVEQRAALVSCFERCVR back to topmRNA from alignment at E-siliculosus-1a_F_contig10559:50..1278- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig10559.402.1 ID=mRNA_E-siliculosus-1a_F_contig10559.402.1|Name=mRNA_E-siliculosus-1a_F_contig10559.402.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1229bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10559:50..1278- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGGGTGGCCAAGTACCTGCTAGAGACTTGCAACGTGGACGCAGGGACGGC
GGACAGCGTAGGCTACACGCCGCTGGCGATAGCTGCCCAGGGCGGGCACG
TGTCCATCGTGCGGATGCTGCTCAAACGGGGCGTGGCCTTCCTGGGGAAG
AACGCCTACCGCGACGCGATCACGGGCGTTGCGATGACGGGAAACATGGA
GATGCTCCGAGAGCTTGTGTACGTCGAGGAAGGGGTGAGTTGTTTTGCAT
GATCGGGATCTCGCCTGGGCGGGAGAAACGGGTGGCGTGGTCAGTGAGTG
TTTTTTGAAGGTGTTACCGTGAGTAGGTTTGTTGGCGGCTGTATTGTCTA
GTGGTGTTGGCGCGAGACGGCTTCTTGTTTGTTTTTCTTCTCGACGGACG
ACTCCTTTGTGGGCCAACCTGACGCGTGTCTGGTTTGTTGTTCTCCCTAG
AGCGTGGAGCAAGAGAGGCCGCCAAGAAAAAGGCGCCCACTATTTATTCC
ACTCCATTTGGGATGATACAACATCCACGTTTGTGTCCGGACGGCTCTCC
CGTTTTCTAACGGAGGGAGGGTTCCCAAAAAGTGTCCCATGGAATGACCA
TGTCGCGTGTACCTCACACCACGTGTGAAATAAAATAGGTCCATCTCCGG
GGCGCGAAGACTTCGCAGCTCATGACCGCGCTCCACTTCTCGGCCGGCTA
CTGCCACGCCCGAGCCACGGCCCTGCTTCTCCACGCCGGCGCCGACGAGG
GCGCGGTGGACAGGAACGGGGACACACCCCTCGACGTGGTCGACACCAAG
CGGTCCCCCCAGGTGCGGCACGGGGTGGGCCGCCGCCGCGTGAGGCGCAT
GCTGCTGCAAGGGCCGGCGTACCGGGCCCTGTCTTGGATGTGGCCCGCCT
CCCCCGCGGTTGAGACGACTCCTGATTCCGCCGCCGCGACTGGCGGTGCT
GCTCTCGCTCTGGCGGGGCCAGATGCTGCGGAACCGGGGTCGGCGAAAAA
TGCGGCGCAATTGGTTCCCTACCCCGAGACGGAGAAGGAGTGGGTGGATA
GTGACGAGAGTTTCGACGAGGCGTTCGCGTCTGCGATGGCCGGGTCGTGG
AGGCTTAACCTTAACGTGGCGGTCTTCCGCCGAAGCCGGCCGCCCCCGCC
GACCTGTGGCAGCGAGGGCGGGTCCTCTCCGGTGGAGCAGCGTGCGGCGC
TCGTGTCGTGCTTTGAAAGGTGTGTGCGT back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10559:50..1278- >mRNA_E-siliculosus-1a_F_contig10559.402.1 ID=mRNA_E-siliculosus-1a_F_contig10559.402.1|Name=mRNA_E-siliculosus-1a_F_contig10559.402.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1650bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10559:50..1278- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGGGTGGCCAAGTACCTGCTAGAGACTTGCAACGTGGACGCAGGGACGGC
GGACAGCGTAGGCTACACGCCGCTGGCGATAGCTGCCCAGGGCGGGCACG
TGTCCATCGTGCGGATGCTGCTCAAACGGGGCGTGGCCTTCCTGGGGAAG
AACGCCTACCGCGACGCGATCACGGGCGTTGCGATGACGGGAAACATGGA
GATGCTCCGAGAGCTTGTGTACGTCGAGGAAGGGAGGGTGGCCAAGTACC
TGCTAGAGACTTGCAACGTGGACGCAGGGACGGCGGACAGCGTAGGCTAC
ACGCCGCTGGCGATAGCTGCCCAGGGCGGGCACGTGTCCATCGTGCGGAT
GCTGCTCAAACGGGGCGTGGCCTTCCTGGGGAAGAACGCCTACCGCGACG
CGATCACGGGCGTTGCGATGACGGGAAACATGGAGATGCTCCGAGAGCTT
GTGTACGTCGAGGAAGGGGTCCATCTCCGGGGCGCGAAGACTTCGCAGCT
CATGACCGCGCTCCACTTCTCGGCCGGCTACTGCCACGCCCGAGCCACGG
CCCTGCTTCTCCACGCCGGCGCCGACGAGGGCGCGGTGGACAGGAACGGG
GACACACCCCTCGACGTGGTCGACACCAAGCGGTCCCCCCAGGTGCGGCA
CGGGGTGGGCCGCCGCCGCGTGAGGCGCATGCTGCTGCAAGGGCCGGCGT
ACCGGGCCCTGTCTTGGATGTGGCCCGCCTCCCCCGCGGTTGAGACGACT
CCTGATTCCGCCGCCGCGACTGGCGGTGCTGCTCTCGCTCTGGCGGGGCC
AGATGCTGCGGAACCGGGGTCGGCGAAAAATGCGGCGCAATTGGTTCCCT
ACCCCGAGACGGAGAAGGAGTGGGTGGATAGTGACGAGAGTTTCGACGAG
GCGTTCGCGTCTGCGATGGCCGGGTCGTGGAGGCTTAACCTTAACGTGGC
GGTCTTCCGCCGAAGCCGGCCGCCCCCGCCGACCTGTGGCAGCGAGGGCG
GGTCCTCTCCGGTGGAGCAGCGTGCGGCGCTCGTGTCGTGCTTTGAAAGG
TGTGTGCGTGTCCATCTCCGGGGCGCGAAGACTTCGCAGCTCATGACCGC
GCTCCACTTCTCGGCCGGCTACTGCCACGCCCGAGCCACGGCCCTGCTTC
TCCACGCCGGCGCCGACGAGGGCGCGGTGGACAGGAACGGGGACACACCC
CTCGACGTGGTCGACACCAAGCGGTCCCCCCAGGTGCGGCACGGGGTGGG
CCGCCGCCGCGTGAGGCGCATGCTGCTGCAAGGGCCGGCGTACCGGGCCC
TGTCTTGGATGTGGCCCGCCTCCCCCGCGGTTGAGACGACTCCTGATTCC
GCCGCCGCGACTGGCGGTGCTGCTCTCGCTCTGGCGGGGCCAGATGCTGC
GGAACCGGGGTCGGCGAAAAATGCGGCGCAATTGGTTCCCTACCCCGAGA
CGGAGAAGGAGTGGGTGGATAGTGACGAGAGTTTCGACGAGGCGTTCGCG
TCTGCGATGGCCGGGTCGTGGAGGCTTAACCTTAACGTGGCGGTCTTCCG
CCGAAGCCGGCCGCCCCCGCCGACCTGTGGCAGCGAGGGCGGGTCCTCTC
CGGTGGAGCAGCGTGCGGCGCTCGTGTCGTGCTTTGAAAGGTGTGTGCGT back to top
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