prot_E-siliculosus-1a_F_contig10554.401.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10554.401.1
Unique Nameprot_E-siliculosus-1a_F_contig10554.401.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length83
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10554.401.1 vs. uniprot
Match: A0A6H5JTY8_9PHAE (CP-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTY8_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 2.120e-41
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0
Query:    1 MLNRSGAVGTEALMGVLKNYCRSLNLKTAITVGVIGYPNVGKSSLINSLKRSKAVGVSATPGFTKSMQEIHLDKTVR 77
            MLNRSGAVGTEALMGVLKNYCRSLNLKTAITVGVIGYPNVGKSSLINSLKRSKAVGVSATPGFTKSMQEIHLDKTV+
Sbjct:  240 MLNRSGAVGTEALMGVLKNYCRSLNLKTAITVGVIGYPNVGKSSLINSLKRSKAVGVSATPGFTKSMQEIHLDKTVK 316          
BLAST of mRNA_E-siliculosus-1a_F_contig10554.401.1 vs. uniprot
Match: A0A836CE27_9STRA (Nug1, nuclear ribosome-associated GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE27_9STRA)

HSP 1 Score: 130 bits (326), Expect = 2.240e-33
Identity = 61/76 (80.26%), Postives = 71/76 (93.42%), Query Frame = 0
Query:    2 LNRSGAVGTEALMGVLKNYCRSLNLKTAITVGVIGYPNVGKSSLINSLKRSKAVGVSATPGFTKSMQEIHLDKTVR 77
            L+RSG++G EALM +LKNYCRSL++KTAITVG+IGYPNVGKSSLINSLKRSKAVGVS TPGFTK+MQE+ LDK V+
Sbjct:  241 LSRSGSIGAEALMNILKNYCRSLDIKTAITVGIIGYPNVGKSSLINSLKRSKAVGVSPTPGFTKAMQEVQLDKLVK 316          
BLAST of mRNA_E-siliculosus-1a_F_contig10554.401.1 vs. uniprot
Match: A0A4D9DAV5_9STRA (CP-type G domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAV5_9STRA)

HSP 1 Score: 117 bits (293), Expect = 7.710e-29
Identity = 54/77 (70.13%), Postives = 70/77 (90.91%), Query Frame = 0
Query:    1 MLNRSGAVGTEALMGVLKNYCRSLNLKTAITVGVIGYPNVGKSSLINSLKRSKAVGVSATPGFTKSMQEIHLDKTVR 77
            +L+RSG+VG EAL+ +LKNY RSL++KT+I+VGV+GYPNVGKSSLINSLKR+KA GVS+TPGFT+ MQE+ LDK ++
Sbjct:  244 LLSRSGSVGAEALLQLLKNYSRSLDIKTSISVGVVGYPNVGKSSLINSLKRTKAAGVSSTPGFTRCMQEVQLDKHIK 320          
BLAST of mRNA_E-siliculosus-1a_F_contig10554.401.1 vs. uniprot
Match: A0A1V9YUQ5_9STRA (Guanine nucleotide-binding protein-like 3 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YUQ5_9STRA)

HSP 1 Score: 112 bits (279), Expect = 2.710e-28
Identity = 55/77 (71.43%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    1 MLNRSGAVGTEALMGVLKNYCRSLNLKTAITVGVIGYPNVGKSSLINSLKRSKAVGVSATPGFTKSMQEIHLDKTVR 77
            ++  S AVGTEALM +LKNYCRS N+KTAITVGVIGYPNVGKSS+INSLKRSKA  VS+  G TK +QEIHLD  ++
Sbjct:  217 LMTGSRAVGTEALMQLLKNYCRSSNIKTAITVGVIGYPNVGKSSVINSLKRSKAASVSSIAGHTKVVQEIHLDNKIK 293          
BLAST of mRNA_E-siliculosus-1a_F_contig10554.401.1 vs. uniprot
Match: GNL3_DICDI (Guanine nucleotide-binding protein-like 3 homolog n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=GNL3_DICDI)

HSP 1 Score: 115 bits (288), Expect = 3.330e-28
Identity = 53/77 (68.83%), Postives = 67/77 (87.01%), Query Frame = 0
Query:    1 MLNRSGAVGTEALMGVLKNYCRSLNLKTAITVGVIGYPNVGKSSLINSLKRSKAVGVSATPGFTKSMQEIHLDKTVR 77
            MLN + ++G E L+ +LKNY RSLN+KT++TVG+IGYPNVGKSSLINSLKR+++VGV ATPGFTK  QE+HLDK V+
Sbjct:  235 MLNSTESLGAEQLLQLLKNYSRSLNIKTSVTVGIIGYPNVGKSSLINSLKRTRSVGVGATPGFTKFAQEVHLDKNVK 311          
BLAST of mRNA_E-siliculosus-1a_F_contig10554.401.1 vs. uniprot
Match: L8GFT1_ACACA (G domain-containing protein (Fragment) n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GFT1_ACACA)

HSP 1 Score: 112 bits (280), Expect = 3.650e-28
Identity = 51/76 (67.11%), Postives = 66/76 (86.84%), Query Frame = 0
Query:    2 LNRSGAVGTEALMGVLKNYCRSLNLKTAITVGVIGYPNVGKSSLINSLKRSKAVGVSATPGFTKSMQEIHLDKTVR 77
            +  S  +G +AL+ +LKNY RSLN+KT+ITVG+IGYPNVGKSSLINSLKR +AVGV ATPG+T++MQE+H+DK V+
Sbjct:    1 METSECLGADALIQLLKNYSRSLNMKTSITVGIIGYPNVGKSSLINSLKRERAVGVGATPGYTRAMQEVHIDKHVK 76          
BLAST of mRNA_E-siliculosus-1a_F_contig10554.401.1 vs. uniprot
Match: A0A5B7CXI6_PORTR (Guanine nucleotide-binding protein-like 3 n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=A0A5B7CXI6_PORTR)

HSP 1 Score: 111 bits (277), Expect = 7.620e-28
Identity = 51/77 (66.23%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    1 MLNRSGAVGTEALMGVLKNYCRSLNLKTAITVGVIGYPNVGKSSLINSLKRSKAVGVSATPGFTKSMQEIHLDKTVR 77
            +L  S  +G + L+ +LKNYCR+ ++KTAITVGV+G PNVGKSSLINSLKRSK+ GV ATPGFTKSMQE+HLD  ++
Sbjct:  179 LLQSSRCLGADVLLQLLKNYCRNKDIKTAITVGVVGLPNVGKSSLINSLKRSKSCGVGATPGFTKSMQEVHLDSKIK 255          
BLAST of mRNA_E-siliculosus-1a_F_contig10554.401.1 vs. uniprot
Match: A0A151ZEC2_9MYCE (Guanine nucleotide binding protein 3 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZEC2_9MYCE)

HSP 1 Score: 114 bits (284), Expect = 1.220e-27
Identity = 51/77 (66.23%), Postives = 67/77 (87.01%), Query Frame = 0
Query:    1 MLNRSGAVGTEALMGVLKNYCRSLNLKTAITVGVIGYPNVGKSSLINSLKRSKAVGVSATPGFTKSMQEIHLDKTVR 77
            +LN + ++G E+L+ +LKNY RSLN+K A+TVG++GYPNVGKSSLINSLKR+++VGV ATPGFTK  QE+HLDK V+
Sbjct:  228 LLNSTESLGAESLLQLLKNYSRSLNIKVAVTVGIVGYPNVGKSSLINSLKRTRSVGVGATPGFTKVAQEVHLDKNVK 304          
BLAST of mRNA_E-siliculosus-1a_F_contig10554.401.1 vs. uniprot
Match: A0A1X0RMW4_RHIZD (P-loop containing nucleoside triphosphate hydrolase protein n=4 Tax=Rhizopus TaxID=4842 RepID=A0A1X0RMW4_RHIZD)

HSP 1 Score: 111 bits (277), Expect = 1.480e-27
Identity = 52/77 (67.53%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    1 MLNRSGAVGTEALMGVLKNYCRSLNLKTAITVGVIGYPNVGKSSLINSLKRSKAVGVSATPGFTKSMQEIHLDKTVR 77
            +LN S  +G + L+ +LKNYCR+LNLKT+ITVG+IGYPNVGKSS+INSLKRS+  GV ATPGFTK  QEI LDK ++
Sbjct:  140 LLNTSECLGADDLIRLLKNYCRNLNLKTSITVGIIGYPNVGKSSVINSLKRSRVCGVGATPGFTKVAQEISLDKNIK 216          
BLAST of mRNA_E-siliculosus-1a_F_contig10554.401.1 vs. uniprot
Match: A0A2T9YWA5_9FUNG (CP-type G domain-containing protein n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YWA5_9FUNG)

HSP 1 Score: 112 bits (281), Expect = 2.930e-27
Identity = 51/70 (72.86%), Postives = 64/70 (91.43%), Query Frame = 0
Query:    8 VGTEALMGVLKNYCRSLNLKTAITVGVIGYPNVGKSSLINSLKRSKAVGVSATPGFTKSMQEIHLDKTVR 77
            VG E+L+ +LKNYCR+LN+KTAITVGVIG+PNVGKSS+INSLKR++  GV +TPGFTKS+Q +HLDKT+R
Sbjct:  202 VGGESLLQLLKNYCRNLNIKTAITVGVIGFPNVGKSSIINSLKRARVCGVGSTPGFTKSVQLVHLDKTIR 271          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10554.401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTY8_9PHAE2.120e-4198.70CP-type G domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CE27_9STRA2.240e-3380.26Nug1, nuclear ribosome-associated GTPase n=1 Tax=T... [more]
A0A4D9DAV5_9STRA7.710e-2970.13CP-type G domain-containing protein n=3 Tax=Monodo... [more]
A0A1V9YUQ5_9STRA2.710e-2871.43Guanine nucleotide-binding protein-like 3 (Fragmen... [more]
GNL3_DICDI3.330e-2868.83Guanine nucleotide-binding protein-like 3 homolog ... [more]
L8GFT1_ACACA3.650e-2867.11G domain-containing protein (Fragment) n=1 Tax=Aca... [more]
A0A5B7CXI6_PORTR7.620e-2866.23Guanine nucleotide-binding protein-like 3 n=1 Tax=... [more]
A0A151ZEC2_9MYCE1.220e-2766.23Guanine nucleotide binding protein 3 n=1 Tax=Tiegh... [more]
A0A1X0RMW4_RHIZD1.480e-2767.53P-loop containing nucleoside triphosphate hydrolas... [more]
A0A2T9YWA5_9FUNG2.930e-2772.86CP-type G domain-containing protein n=1 Tax=Smitti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 4..79
e-value: 6.1E-19
score: 70.6
NoneNo IPR availablePANTHERPTHR11089GTP-BINDING PROTEIN-RELATEDcoord: 2..77
NoneNo IPR availablePANTHERPTHR11089:SF30GUANINE NUCLEOTIDE-BINDING PROTEIN-LIKE 3 HOMOLOGcoord: 2..77
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 32..73
e-value: 1.8E-11
score: 44.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10554contigE-siliculosus-1a_F_contig10554:621..1706 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10554.401.1mRNA_E-siliculosus-1a_F_contig10554.401.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10554 594..1706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10554.401.1 ID=prot_E-siliculosus-1a_F_contig10554.401.1|Name=mRNA_E-siliculosus-1a_F_contig10554.401.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=83bp
MLNRSGAVGTEALMGVLKNYCRSLNLKTAITVGVIGYPNVGKSSLINSLK
RSKAVGVSATPGFTKSMQEIHLDKTVRTPNMW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR006073GTP_binding_domain