Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1055.400.1 vs. uniprot
Match:
D8LRM3_ECTSI (FkbM n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM3_ECTSI)
HSP 1 Score: 270 bits (691), Expect = 4.340e-87
Identity = 135/145 (93.10%), Postives = 140/145 (96.55%), Query Frame = 1
Query: 1 QEVFVRRSYFQHGIRVEEGAVVVDAGANIGLFSLQCPREAKGVQVIAFEPIPVIYDVLVRNLFNATSGSVKEGTCPKPVALRVALGAEQAEEEFYFYRDNPGESTRHRGERGEQRQALDADVDAASWRRVVEERKHPDRARGARY 435
+EVFVRR YFQHGIRVEEGAVVVDAGANIGLFSLQC REAKGVQV AFEPIPVIYDVLVRNLFNA+SG VKEGTCPKPVALRVALGAEQAEEEFYF+RDNPGESTRHRGERGEQ+QAL+ADVDAASWRRVVEE KHPDRARGARY
Sbjct: 29 EEVFVRRCYFQHGIRVEEGAVVVDAGANIGLFSLQCLREAKGVQVFAFEPIPVIYDVLVRNLFNASSGPVKEGTCPKPVALRVALGAEQAEEEFYFFRDNPGESTRHRGERGEQQQALEADVDAASWRRVVEEGKHPDRARGARY 173
BLAST of mRNA_E-siliculosus-1a_F_contig1055.400.1 vs. uniprot
Match:
A0A101SVT2_9ACTN (Methyltransf_21 domain-containing protein n=1 Tax=Streptomyces bungoensis TaxID=285568 RepID=A0A101SVT2_9ACTN)
HSP 1 Score: 87.8 bits (216), Expect = 4.050e-16
Identity = 48/107 (44.86%), Postives = 65/107 (60.75%), Query Frame = 1
Query: 4 EVFVRRSYFQHGIRVEEGAVVVDAGANIGLFSLQCPREAKGVQVIAFEPIPVIYDVLVRNLFNATSGSVKEGTCPKPVALRVALGAEQAEE-EFYFYRDNPGESTRH 321
E+FV R+Y +HGIR+ + A +VDAGAN+GLFSL RE G ++AFEPIP I+ L+ NL + + V+ +R ALG + E F FY PG STR+
Sbjct: 34 EIFVERAYLKHGIRLSDSARIVDAGANVGLFSLFVKREFPGASILAFEPIPTIHQALLENLDSHGAKDVE--------VVRAALGRQPEERVRFTFYPALPGNSTRY 132
BLAST of mRNA_E-siliculosus-1a_F_contig1055.400.1 vs. uniprot
Match:
A0A370ASV3_9ACTN (FkbM family methyltransferase n=1 Tax=Streptomyces corynorhini TaxID=2282652 RepID=A0A370ASV3_9ACTN)
HSP 1 Score: 85.1 bits (209), Expect = 3.970e-15
Identity = 45/107 (42.06%), Postives = 67/107 (62.62%), Query Frame = 1
Query: 4 EVFVRRSYFQHGIRVEEGAVVVDAGANIGLFSLQCPREAKGVQVIAFEPIPVIYDVLVRNLFNATSGSVKEGTCPKPVALRVALGAEQAEE-EFYFYRDNPGESTRH 321
E+FV R+Y +HGI++ + + +VDAGAN+GLFSL +E G +++AFEPIP I+ L NL + + V+ +R ALG++ E+ F FY PG STR+
Sbjct: 34 EIFVERTYLKHGIQLSDSSRIVDAGANVGLFSLFMKQEFPGARILAFEPIPAIHQALTENLDSHGAKDVE--------VVRSALGSQYEEQVRFTFYPSLPGNSTRY 132
BLAST of mRNA_E-siliculosus-1a_F_contig1055.400.1 vs. uniprot
Match:
A0A0N1NKX6_9ACTN (Methyltransferase FkbM family n=3 Tax=Actinomycetia TaxID=1760 RepID=A0A0N1NKX6_9ACTN)
HSP 1 Score: 83.2 bits (204), Expect = 1.700e-14
Identity = 44/107 (41.12%), Postives = 66/107 (61.68%), Query Frame = 1
Query: 4 EVFVRRSYFQHGIRVEEGAVVVDAGANIGLFSLQCPREAKGVQVIAFEPIPVIYDVLVRNLFNATSGSVKEGTCPKPVALRVALGAEQAEE-EFYFYRDNPGESTRH 321
E+FV R+Y +HGI++ + + +VDAGAN+GLFSL +E G +++AFEPIP I+ L+ NL + + V+ +R ALG ++ F FY PG STR+
Sbjct: 34 EIFVERAYLKHGIQLSDSSRIVDAGANVGLFSLFVKQEFPGARILAFEPIPAIHQALLENLDSRGAKDVE--------VVRSALGGRHEDQVRFTFYPALPGNSTRY 132
BLAST of mRNA_E-siliculosus-1a_F_contig1055.400.1 vs. uniprot
Match:
UPI0006E3758B (FkbM family methyltransferase n=1 Tax=Streptomyces graminilatus TaxID=1464070 RepID=UPI0006E3758B)
HSP 1 Score: 83.2 bits (204), Expect = 1.700e-14
Identity = 46/107 (42.99%), Postives = 66/107 (61.68%), Query Frame = 1
Query: 4 EVFVRRSYFQHGIRVEEGAVVVDAGANIGLFSLQCPREAKGVQVIAFEPIPVIYDVLVRNLFNATSGSVKEGTCPKPVALRVALGAEQAEE-EFYFYRDNPGESTRH 321
E+FV R+Y +HGI++ + + VVDAGAN+GLFSL +E G +++AFEPIP I+ L+ NL + + V+ R ALG + +E F FY PG STR+
Sbjct: 34 EIFVERAYLKHGIQLSDSSRVVDAGANVGLFSLFVKQEFPGAKILAFEPIPAIHRALLENLDSHGAKDVE--------VHRSALGRQHEDEVRFTFYPSLPGNSTRY 132
BLAST of mRNA_E-siliculosus-1a_F_contig1055.400.1 vs. uniprot
Match:
A0A1A9C7P2_9ACTN (Methyltransferase, FkbM family n=1 Tax=Streptomyces sp. DI166 TaxID=1839783 RepID=A0A1A9C7P2_9ACTN)
HSP 1 Score: 82.4 bits (202), Expect = 3.160e-14
Identity = 46/107 (42.99%), Postives = 66/107 (61.68%), Query Frame = 1
Query: 4 EVFVRRSYFQHGIRVEEGAVVVDAGANIGLFSLQCPREAKGVQVIAFEPIPVIYDVLVRNLFNATSGSVKEGTCPKPVALRVALGAEQAEE-EFYFYRDNPGESTRH 321
E+F R+Y +HGI++ + + VVDAGAN+GLFSL +E G +++AFEPIP I+ LV NL + + V+ +R ALG + E+ F FY PG STR+
Sbjct: 34 EIFGERAYLKHGIQLSDSSRVVDAGANVGLFSLFVKQEFPGARILAFEPIPAIHRALVENLDSHGAKDVE--------VVRAALGRKAEEQVRFTFYPALPGNSTRY 132
BLAST of mRNA_E-siliculosus-1a_F_contig1055.400.1 vs. uniprot
Match:
UPI00196289BA (FkbM family methyltransferase n=1 Tax=Streptomyces actuosus TaxID=1885 RepID=UPI00196289BA)
HSP 1 Score: 80.9 bits (198), Expect = 1.090e-13
Identity = 49/108 (45.37%), Postives = 65/108 (60.19%), Query Frame = 1
Query: 4 EVFVRRSYFQHGIRVEEGAVVVDAGANIGLFSLQCPREAKGVQVIAFEPIPVIYDVLVRNLFNATSGSVKEGTCPKPVALRVALGAEQAEEE--FYFYRDNPGESTRH 321
E+FV R+Y +HGI++ A VVDAGAN+GLFSL +E +++AFEPIP I+ L+ NL + V+ +R ALG QAEE F FY PG STR+
Sbjct: 34 EIFVERAYLRHGIQLSGSARVVDAGANVGLFSLFVKQEFPDARILAFEPIPAIHRALLENLDGHGAKDVE--------VVRAALGR-QAEERVRFTFYPAIPGNSTRY 132
BLAST of mRNA_E-siliculosus-1a_F_contig1055.400.1 vs. uniprot
Match:
A0A291S0C4_9ACTN (Methyltransf_21 domain-containing protein n=13 Tax=Streptomyces TaxID=1883 RepID=A0A291S0C4_9ACTN)
HSP 1 Score: 78.6 bits (192), Expect = 5.270e-13
Identity = 47/107 (43.93%), Postives = 59/107 (55.14%), Query Frame = 1
Query: 4 EVFVRRSYFQHGIRVEEGAVVVDAGANIGLFSLQCPREAKGVQVIAFEPIPVIYDVLVRNLFNATSGSVKEGTCPKPVALRVALGAEQAEE-EFYFYRDNPGESTRH 321
EVFV R Y +HGIR+ A VVD GAN+G+FSL E +++AFEPIP IY L NL + VK +R ALG E+ F ++ PG STRH
Sbjct: 15 EVFVDRDYLKHGIRIPGSARVVDVGANVGMFSLFVVGECPDARILAFEPIPEIYQALRENLSRYGAKGVKP--------VRAALGGLPEEKVRFTYFPALPGNSTRH 113
BLAST of mRNA_E-siliculosus-1a_F_contig1055.400.1 vs. uniprot
Match:
UPI0016739E92 (FkbM family methyltransferase n=1 Tax=Streptomyces capitiformicae TaxID=2014920 RepID=UPI0016739E92)
HSP 1 Score: 78.6 bits (192), Expect = 6.900e-13
Identity = 45/107 (42.06%), Postives = 62/107 (57.94%), Query Frame = 1
Query: 4 EVFVRRSYFQHGIRVEEGAVVVDAGANIGLFSLQCPREAKGVQVIAFEPIPVIYDVLVRNLFNATSGSVKEGTCPKPVALRVALGAEQAEE-EFYFYRDNPGESTRH 321
E+F R+Y +HGI + + + VVDAGAN+GLFSL +E G +++AFEPIP I+ L+ NL + V+ R ALG +E F FY PG STR+
Sbjct: 34 EIFFERTYLKHGITLSDSSRVVDAGANVGLFSLFVKQEFPGAKILAFEPIPAIHRALLGNLDEHGAKDVE--------VHRAALGRRHEDEVRFTFYPALPGNSTRY 132
BLAST of mRNA_E-siliculosus-1a_F_contig1055.400.1 vs. uniprot
Match:
A0A0C5VNW6_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Gynuella sunshinyii YC6258 TaxID=1445510 RepID=A0A0C5VNW6_9GAMM)
HSP 1 Score: 79.7 bits (195), Expect = 3.360e-12
Identity = 44/96 (45.83%), Postives = 54/96 (56.25%), Query Frame = 1
Query: 4 EVFVRRSYFQHGIRVEEGAVVVDAGANIGLFSLQCPREAKGVQVIAFEPIPVIYDVLVRNLFNATSGSVKEGTCPKPVALRVALGAEQAEEEFYFY 291
E+FV ++Y + GI VE G VV+D GANIG+FSL E K VQ+ AFEP P YDVL +NL P VAL + + E EF FY
Sbjct: 420 EIFVEKTYLKKGITVERGEVVIDIGANIGMFSLFIASEFKEVQIFAFEPSPATYDVLNKNLALYI---------PNAVALPFGVSNQDGEAEFVFY 506
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1055.400.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 4.34e-87 / Id = 93.10 Expect = 4.05e-16 / Id = 44.86 Expect = 3.97e-15 / Id = 42.06 Expect = 1.70e-14 / Id = 41.12 Expect = 1.70e-14 / Id = 42.99 Expect = 3.16e-14 / Id = 42.99 Expect = 1.09e-13 / Id = 45.37 Expect = 5.27e-13 / Id = 43.93 Expect = 6.90e-13 / Id = 42.06 Expect = 3.36e-12 / Id = 45.83 Sequence D8LRM3_ECTSI A0A101SVT2_9ACTN A0A370ASV3_9ACTN A0A0N1NKX6_9ACTN UPI0006E3758B A0A1A9C7P2_9ACTN UPI00196289BA A0A291S0C4_9ACTN UPI0016739E92 A0A0C5VNW6_9GAMM Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1055.400.1
>prot_E-siliculosus-1a_F_contig1055.400.1 ID=prot_E-siliculosus-1a_F_contig1055.400.1|Name=mRNA_E-siliculosus-1a_F_contig1055.400.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=146bp
QEVFVRRSYFQHGIRVEEGAVVVDAGANIGLFSLQCPREAKGVQVIAFEP back to top mRNA from alignment at E-siliculosus-1a_F_contig1055:32536..35861-
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1055.400.1 ID=mRNA_E-siliculosus-1a_F_contig1055.400.1|Name=mRNA_E-siliculosus-1a_F_contig1055.400.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3326bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1055:32536..35861- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)CAGGAAGTGTTTGTGAGGCGCTCTTATTTTCAGCATGGCATCCGTGTCGA
GGAAGGTGCCGTCGTTGTCGACGCTGGTGCAAACATTGGGCTATTCTCGC
TGCAATGTCCCAGAGAGGCAAAAGGGGTGCAG GTACTCGCTTGCCCTAGG
CTTCCGATTTCAACGACACACCGTCGGTCATACTGTAATCAAGATAGAGA
GGCTGTGGGAGCATCTCGCGAAGCATTCACCATACCAGCACTTTCCTAAA
GTACACGTGGCCACGGCTTCTTTGCATTTTACAAGACCTTTGGCGCTGAT
GCCTGCGTATGCCATTTTCCATGTGTCATTTTCACCTTTTTCCCCATCTC
CACCACGGCATCCCTCTCCACCACTTACAACAGGAACATTTTCTCGGTAG
GTCAACCTTGTTTCCTTTCCTCGTTTAAAAGGCGCAGCTGTAAATTATCC
TCACGGCAGTTGTTGCCGAATCCCTCTGGTTGTGTGGATTTATAAGTCGT
CTCTTTATTTTACCTCTCGCGTAAGCTCATGCAATATCAGAAGCAACCGC
ATTTACGTTTTGCGTTCCCGCATCGTTCGCCTATGACTTCTTCTTTTTCT
TGCCTGGTGTCTGCTGCCTCCTCTCGATGACATTTTGGCGTCAGTATTTG
GTCGCTTGTTTTCTCTGCTCGTGTCTCTCGGCACGACTCTTCCCTATTCC
TGCTGGCCCTTTGGTTGCTCTCTGGCATCACACTGTTCCTTTCTTTGGCC
AGGTGCCACGTTTCTTCTCTTTTGTTGCCTGGCAAGGTTTTATTCTAGTT
GTTATGTGTGTTGCCTTCTTTGTATTTCATATTTGATAACCGCCAGACAA
GACTTCGAAAAGGAACAAAAGCGTGATGTTGGCGAAACCCTCCGCCATAA
CATTTGTATTATCAATGTCAAGAGGTTCAGTGAACACCTTTGTTGCACCT
TGTTTCCAAAAGCGCACCGTTAGTTCATTCTCTGAGTAGGAGGAGCATTG
GACAACCTTCACTTTGTTCTGGTTGTCTTCAATATTCGAATCGGAGAACA
ACGTGTCATCGCAAGCTTCGAGATTGGATTCCTGATACAAGGAGGTTCAT
GCCGTTGGCAGCACGAACCAGTAATGTACAGATTTTTCTTTTGGCGTCCT
CAATCTGGGGAGGCCCCTCCTGGCGCAGTTCCTAGCTATTGAGAGGAAAT
CGTGCTTACTAAGGCGTCGTCGTGGGCCAGGTTTGGCACGATTCATGAAT
ATTACCAAACAATCAGCAGTCAACCATACCCGTCATCGACATACGACAAC
GCCTATCGTAACAGGTTATTGCCTTTGAGCCGATCCCGGTGATTTACGAC
GTTCTAGTCCGCAACCTGTTCAACGCCACCTCGGGTTCCGTCAAGGAGGG
AACCTGTCCGAAGCCCGTCGCCCTTCGTGTAGCTCTAGGGGCCGAACAGG
CTGAAGAGGAGTTCTACTTTTACCGAGACAACCCGGGAGAAAGCACCAG G
TGAAGACCAAGCCTACACCGCTCGAACTATATGGTTCTCGTAAGCTGAGC
CAAAGGCAAGATGATAGAAACTTGCAAGCAAAGGTAAAAATGAAACAAGC
AGGTTTATGTCCTCATCGTAAGTGACATGGAACATTCATATGCTGGTAGC
TCTGCCGCTGGAGCGCCCTCCAGCAGGAGAACTCAGATGTTGTCATTTCT
GCGGTCGCCACTGTACCCCCGCTGGCTGGTTTCTAGGCTTGCAGCCCGTG
TTGTAGTACTAACACCGGAGAGTATGTTGCCACGCCTGACCGTATCATGG
ATTGTACTTTATGTCTCTAAAGGCATCGAGGAGAGCGTGGGGAGCAGCGG
CAAGCTTTAGACGCGGACGTAGACGCCGCATCTTGGCGACGAGTTGTTGA
AGAAAGAAAACATCCAG GTGGCGAAGATGTAGCGGGAGCTCACAACGGTG
TCTGTGAAAATAAGCCGGAAGAGGAAGGGGGCGAGCCTTCAGTGTGTAAT
GTGGTGCCATTGTCACTCGCTCTCCATCAGCTGGGGGTAGCTGGCGTGGA
CTTGTTGAAAGTGGATGTGGAAGGTGACGAGCTTGCGGTACTTCATGGCA
TCGATGACGACGACTGGCCGAAGATCCGCCAGGCGAGATTGGATTGTCAG
GGCAAGGATGCTAGCATGCTCTCGTCGTCGCTTGCATAGGAAGTCCTCAA
TGCTGAGAAGTCAAGTTGGCCATGTGTCGCATGGCTTGCATTTGTCAGCG
GTCAACAAGACCTGGTTTGCTAACAAGTTCTTTGACTGCTCCTTTCCCTG
TTTCCAAAGACATGGGTTGGCCAATCAACGAGTAAATTGGCAAAGAAAAA
TGGCGGTTATGACCCGTCTCCCCGCTCCATTCATCTCCAACTCTTCGGTT
GCATCACCGTGTTTTTTTTCTGGCCTCGCCCGCTGTCACGGCGCCGGGTT
GGCCTACTCGAAGCGTACTTCGTCGAAGTCCCTACGCAATGCTCTTCGAT
TGATGGGAACCGTCCGGTTTTGGCCCTTCACCGCTTGTTGCAGATCGCGC
TAGAGGTGCACGATATTGA TGGGCGACTGGCTGCGACTATCAGAATCTTG
ACATCCGAACCGGCGGCTTTCGACGAGGTCTGCTGGCAGCCGTTGCTCAC
GAGCGAGGTCAAGGGCTACGTCATGGTTGTTCCTAAGGCCCTCCAGATGT
TCCTCGTGTTTGCAAAGCGGCGACCGAAGAAAGCCCCTTCCGCTGATGAT
GGATCCGCAGGAGGACGAGGAGCGGAAGCACCAAGTGTCACGGGTTCGGT
GCTCGAAGGTGGCGAACAGGCAGGGGGTGCCCACTTACCACATATTGTTG
GAGAAAGCAAGGGTGACAGCGGAGCATACGAGGGAACAATCCCCCCATCG
TGTTGCTCCTGCGTCTCCGCTGACCGCTAGTCTGTGCTCGGCTGATCTGA
TGCTACTTGGTGGGGCTACGAATATACGCCTAGATGTTCGATCCGCAGAA
AACGGGTGGGGACGAGCAAGAATAGGTCGACAATATTTCGTCGTAAAGTC
GCACATGGTCGACTCGTCAGTGATAACGACGTCGGAGACTGCTTGCTCAA
TATGAGCATCACATAAGATCTCGAAGGCAAACGTTCGACGTCCTGCCGGT
TTGATGGAAGTGGACCTCCTGACAAAGGGCGTTCAACAGGGGGCAGGTCT
TTGGTACTGTTGGCAGTGTGCACACGAACGTGTCTGCCCACAGGGTTCCG
TCCAAGAATCGGTGTAACAGCAGCAATCACGTCGAATGACGAATGGCAGG
TTGCGAATACGGTTCGTTGGGGGTGC back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1055:32536..35861-
>mRNA_E-siliculosus-1a_F_contig1055.400.1 ID=mRNA_E-siliculosus-1a_F_contig1055.400.1|Name=mRNA_E-siliculosus-1a_F_contig1055.400.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=876bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1055:32536..35861- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top