prot_E-siliculosus-1a_F_contig1053.385.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1053.385.1
Unique Nameprot_E-siliculosus-1a_F_contig1053.385.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length727
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1053.385.1 vs. uniprot
Match: D8LRF9_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF9_ECTSI)

HSP 1 Score: 657 bits (1695), Expect = 5.090e-212
Identity = 580/730 (79.45%), Postives = 586/730 (80.27%), Query Frame = 0
Query:   16 GVVLEGRSTVWLDGSTLLENSAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLSGASNLTVSDSSFLDNYYFGTSTVGLGGGVKIIGSYATTTISIADSLFEGNSAIDGGGLYISSDYVLTVSRTVFHDNVAGVFGGGAVLESNGVAALSSSNFTGGFAWNGXXXXXXXGSYVSISDCLFEGNSNRFAGGAIRVEAEAAVSLDGTTFSNNFISSQSGAGSGGAVSVSAGTLTATDCKFENNQAFHDDRYDVETDPLEGGGAVIISDGSN------------ATFLDCNFTLN-----GGAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEATGELDGVAFVGNXXXXXXXXAVFFSLGTNATVTGGVFSSNTATGAGGHVVVADAHTNVELLPDAAA-SGVGTTTATPLVLSGGEAGTDGGAVHAYSGAAVSAVSVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADAYFVGTGXXXXXXXXXXXXXXXRAFTGADVVLEGCVVDGNTAQLGGGVSSVDAXXXXXXXXXXXXXXXXDGGGLRASYLSKVVLXXXXXXXXXXXXXXXXVALDASSDTDNDDLNAANASSALDCRSGAFEGNHAGERGGAVYVTRESVLSFEGCGSFGNSASLGASVYASHSFVTLSEGSVLANDEVPTGAMVYALSTQLVAWNASFSV 727
            GVVLEGRSTVWLDGSTLLE     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLSGASNLTVSDSSFLDNYYFG  T GLGGGVKIIGSYATTTISI DSLFEGNSA DGGGLYISSDYVLTVSRTVFHDNVAG FGGGAVLESNGVAALSSSNFTGGFAWN XXXXXXX   VSISDCLFEGNSN+FAGGAIRVE EAAVSL GTTFSNNFISSQSGAGSGGAVSVSAGTLTATDC FENNQAFHDDRYDVETDPLEGGGAVIISDGSN            AT  +  FT N     GGA+              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               GTNATVTGG+FS+NTAT  GGHVV ADAHTNVELLPDAAA SGVGTT ATPLVLSGGEAGTDGGAVHAY G         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADAYFVGTG   XXXXXXXXXXXXRAFTGADVVLEGCVVDGNTAQLGGGVSSVDA   XXXXXXXXXXX  DGGGLRASYLSKVVL  XXXXXXXXXXXXXXVALDASS TDND+LNAANASSALDCR G FEGNHAGERGGAVYVTRESVLSFEGC SFGNSASLGA                              LSTQLVAWNASFSV
Sbjct:  187 GVVLEGRSTVWLDGSTLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLSGASNLTVSDSSFLDNYYFGDRTFGLGGGVKIIGSYATTTISITDSLFEGNSATDGGGLYISSDYVLTVSRTVFHDNVAGFFGGGAVLESNGVAALSSSNFTGGFAWNXXXXXXXXXXRVSISDCLFEGNSNKFAGGAIRVEEEAAVSLSGTTFSNNFISSQSGAGSGGAVSVSAGTLTATDCNFENNQAFHDDRYDVETDPLEGGGAVIISDGSNVGGALLAEGSSTATLTNVAFTSNQAGVYGGALSIYEESVCLMNASHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------GTNATVTGGLFSTNTATDTGGHVVAADAHTNVELLPDAAAASGVGTT-ATPLVLSGGEAGTDGGAVHAYGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADAYFVGTGTNFXXXXXXXXXXXXRAFTGADVVLEGCVVDGNTAQLGGGVSSVDASLAXXXXXXXXXXXFTDGGGLRASYLSKVVLDTXXXXXXXXXXXXXXVALDASSGTDNDNLNAANASSALDCRGGTFEGNHAGERGGAVYVTRESVLSFEGCESFGNSASLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSTQLVAWNASFSV 884          
BLAST of mRNA_E-siliculosus-1a_F_contig1053.385.1 vs. uniprot
Match: A0A6H5JU65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU65_9PHAE)

HSP 1 Score: 619 bits (1596), Expect = 1.800e-195
Identity = 582/746 (78.02%), Postives = 589/746 (78.95%), Query Frame = 0
Query:   16 GVVLEGRSTVWLDGSTLLENSAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLSGASNLTVSDSSFLDNYYFGTSTVGLGGGVKIIGSYATTTISIADSLFEGNSAIDGGGLYISSDYVLTVSRTVFHDNVAGVFGGGAVLESNGVAALSSSNFTGGFAWNGXXXXXXXGSYVSISDCLFEGNSNRFAGGAIRVEAEAAVSLDGTTFSNNFISSQSGAGSGGAVSVSAGTLTATDCKFENNQAFHDDRYDVETDPLEGGGAVIISDGSNATFLDCNFTLNGGAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEATGELDGVAFVGNXXXXXXXX----------------------------------AVFFSLGTNATVTGGVFSSNTATGAGGHVVVADAHTNVELLPDAAASGVGTTTATPLVLSGGEAGTDGGAVHAYSGAAVSAVSVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADAYFVGTGXXXXXXXXXXXXXXXRAFTGADVVLEGCVVDGNTAQLGGGVSSVDAXXXXXXXXXXXXXXXXDGGGLRASYLSKVVLXXXXXXXXXXXXXXXXVALDASSDTDNDDLNAANASSALDCRSGAFEGNHAGERGGAVYVTRESVLSFEGCGSFGNSASLGASVYASHSFVTLSEGSVLANDEVPTGAMVYALSTQLVAWNASFSV 727
            GVVLEGRSTVWLDGSTLLE     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLSGASNLTVSDSSFL NYYFG  T G+GGGVKIIGSYATTTISIADSLFEGNSA DGGGLYISSDY LTVSRTVFHDNVAG FGGGAVLESNGVAALSS NFTGGFAWN XXXXXXX                                  G+TF NNFISSQSGAGSGGA+SVSAGTL  TDC FENNQAFHDDRYDVETDPLEGGGAVIISDGSNATFLDCNFTLNGGAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     ELDGVAFVGN                                          AVFFSLGTNATVTGG+FSSNTATGAGGHVV ADAHTNVELLPDAAASG   T  T LVLSGGEAGTDGGAVHA            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADAYFVGTG XXXXXXXXXXXXXXRAFTGADVVLEGCVVDGNTA+LGGGVSSVDA  XXXXXXXXXXXXX DGGGLRASYLSKVVL XXXXXXXXXXXXXXXVALDASS TDND L+AANASSALDCRSG FEGN AGERGGAVYVTRESVL+FEGCGSFGNSASLGA                              LSTQLVAWNASFSV
Sbjct:  347 GVVLEGRSTVWLDGSTLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLSGASNLTVSDSSFLGNYYFGDRTFGIGGGVKIIGSYATTTISIADSLFEGNSATDGGGLYISSDYALTVSRTVFHDNVAGFFGGGAVLESNGVAALSSCNFTGGFAWNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXGSTFLNNFISSQSGAGSGGAISVSAGTLIGTDCNFENNQAFHDDRYDVETDPLEGGGAVIISDGSNATFLDCNFTLNGGAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELDGVAFVGNSVSGGRINIDTILVSAYKRPVPLNTLRLSRTNVLSPTNISGGAVFFSLGTNATVTGGLFSSNTATGAGGHVVAADAHTNVELLPDAAASGA-ETAETSLVLSGGEAGTDGGAVHASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADAYFVGTGTXXXXXXXXXXXXXXRAFTGADVVLEGCVVDGNTAKLGGGVSSVDASLXXXXXXXXXXXXXTDGGGLRASYLSKVVLDXXXXXXXXXXXXXXXVALDASSGTDNDVLSAANASSALDCRSGTFEGNRAGERGGAVYVTRESVLAFEGCGSFGNSASLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSTQLVAWNASFSV 1090          
BLAST of mRNA_E-siliculosus-1a_F_contig1053.385.1 vs. uniprot
Match: A0A024U8U9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U8U9_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.490e-5
Identity = 52/196 (26.53%), Postives = 79/196 (40.31%), Query Frame = 0
Query:   71 GISLSGASNLTVSDSSFLDNYYFGTSTVGLGGGVKIIGSYATTTISIADSLFEGNSAIDGGGLYISSDYVLTVSRTVFHDNVAGVFGGGAVLESNGVAALSSSNFTGGFAWNGXXXXXXXGSYVSISDCLFEGNSNRFAGGAIRVEAEAAVSLDGTTFSNNFISSQSGAGSGGAVSVSAGTLTATDCKFENNQAFH 266
            G+++  +  ++ S  SF+ N       V   GG  I+    T       S+F GN A +G G+++ S   + +  T   +N A + GGG V   N V  +S S F    A +G          VS+ +  F  N   F GG + VE        G T  +N  SS  G       + +A      DC   NN  ++
Sbjct: 5324 GVAVDRSGKISASQCSFMAN-------VADEGGGAIMLLLKTVATVTNHSIFVGNVARNGAGIFMESASKMFLDETEIFENKAALNGGGIVCADNAVLTVSRSAFYKNSAVDGAGLHLSTVMLVSVRNSTFTENKASFRGGGLFVERCETTICQGLTVVSNTASSGGGVFWFHESNNNADVFKCADCSIRNNDIYN 5512          
BLAST of mRNA_E-siliculosus-1a_F_contig1053.385.1 vs. uniprot
Match: A0A3D0K0C5_9BACT (Probable pectate lyase C n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A3D0K0C5_9BACT)

HSP 1 Score: 58.9 bits (141), Expect = 2.350e-5
Identity = 64/237 (27.00%), Postives = 96/237 (40.51%), Query Frame = 0
Query:   71 GISLSGASNLTVSDSSFLDNYYFGTSTVGLG-GGVKIIGSYATTTISIADSLFEGNSAIDGGGLYISSDYV--LTVSRTVFHDNVAGVFGGGAVLESNGVAALSSSNFTGGFAWNGXXXXXXXGSYVSISDCLFEGNSNRFAGGAIRVEAEAAVSLDGTTFSNNFISSQSGAGSGGAVSVSAGTLTA--TDCKFENNQAFHDDRYDVETDPLEGGGAV-IISDGSNATFLDCNFTLN 301
            GI + G SN+T +D +            G+G GG++I+  +A  T+++ DS+ EGN + +GG +     +   L V RT F DNVA   GG   +      A+                         +  C F GN     GGAIR     ++ + GT  S+N+    +G   GG      G +T   TDC    N++            + GG AV + +  S   F  C  T N
Sbjct:  138 GIDVKGQSNVTFADGTI----------AGMGEGGIRIL--HAVGTVTVVDSVLEGNRSDEGGAIQSRGSFETKLVVRRTDFIDNVAATHGGAIWIGQRQETAV-------------------------VDTCRFLGNRANTTGGAIRA-GSVSLQVVGTLISDNW----AGIRGGGVALQPDGHVTQKFTDCMVTGNRS----------GSIAGGVAVDLFNLSSRVRFKGCEITDN 322          
BLAST of mRNA_E-siliculosus-1a_F_contig1053.385.1 vs. uniprot
Match: A0A2P6MQW3_9EUKA (Protein kinase domain containing protein (Fragment) n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MQW3_9EUKA)

HSP 1 Score: 57.8 bits (138), Expect = 7.770e-5
Identity = 45/152 (29.61%), Postives = 70/152 (46.05%), Query Frame = 0
Query:   72 ISLSGA-SNLTVSDSSFLDNYYFGTSTVGLGGGVKIIGSYATTTISIADSLFEGNSAIDGGGLYISSDYVLTVSRTVFHDNVAGVFGGGAVLESNGVAALSSSNFTGGFAWNGXXXXXXXGSYVSISDCLFEGNSNRFAGGAIRVEAEAAVS 222
            +S+ G+ + L V  S+FL N     +  G GG + + G+ AT T+S+ DS+F GN A DG  +Y+S+   + + RT    N A   GGG    S     L   +     A  G        S ++++   F  NS    GGA+ ++     S
Sbjct:  219 LSVQGSMTQLVVYSSAFLGN-----TATGAGGSIWVFGT-ATPTVSVYDSIFNGNKATDGAAVYVSTQTTIQIFRTTVTYNTASSTGGGISSRSPSSVYLEDVDMFHNAASKGAGVYINTPS-LNVTGSRFNYNSATAEGGALHLDITPTAS 363          
BLAST of mRNA_E-siliculosus-1a_F_contig1053.385.1 vs. uniprot
Match: A0A2P6MYA3_9EUKA (Protein kinase domain containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MYA3_9EUKA)

HSP 1 Score: 57.8 bits (138), Expect = 8.850e-5
Identity = 45/152 (29.61%), Postives = 70/152 (46.05%), Query Frame = 0
Query:   72 ISLSGA-SNLTVSDSSFLDNYYFGTSTVGLGGGVKIIGSYATTTISIADSLFEGNSAIDGGGLYISSDYVLTVSRTVFHDNVAGVFGGGAVLESNGVAALSSSNFTGGFAWNGXXXXXXXGSYVSISDCLFEGNSNRFAGGAIRVEAEAAVS 222
            +S+ G+ + L V  S+FL N     +  G GG + + G+ AT T+S+ DS+F GN A DG  +Y+S+   + + RT    N A   GGG    S     L   +     A  G        S ++++   F  NS    GGA+ ++     S
Sbjct:  914 LSVQGSMTQLVVYSSAFLGN-----TATGAGGSIWVFGT-ATPTVSVYDSIFNGNKATDGAAVYVSTQTTIQIFRTTVTYNTASSTGGGISSRSPSSVYLEDVDMFHNAASKGAGVYINTPS-LNVTGSRFNYNSATAEGGALHLDITPTAS 1058          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1053.385.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LRF9_ECTSI5.090e-21279.45Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5JU65_9PHAE1.800e-19578.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A024U8U9_9STRA1.490e-526.53Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A3D0K0C5_9BACT2.350e-527.00Probable pectate lyase C n=2 Tax=Phycisphaerae Tax... [more]
A0A2P6MQW3_9EUKA7.770e-529.61Protein kinase domain containing protein (Fragment... [more]
A0A2P6MYA3_9EUKA8.850e-529.61Protein kinase domain containing protein n=1 Tax=P... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 496..517
e-value: 3200.0
score: 3.7
coord: 112..137
e-value: 1400.0
score: 6.1
coord: 54..76
e-value: 510.0
score: 9.3
coord: 77..108
e-value: 920.0
score: 7.5
coord: 372..394
e-value: 10000.0
score: 0.0
coord: 574..595
e-value: 1300.0
score: 6.4
coord: 288..313
e-value: 5100.0
score: 2.2
coord: 469..490
e-value: 4300.0
score: 2.7
coord: 249..287
e-value: 8100.0
score: 0.7
coord: 191..217
e-value: 170.0
score: 11.0
coord: 544..569
e-value: 570.0
score: 9.0
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 2..276
e-value: 4.6E-6
score: 27.9
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 132..321
e-value: 1.5E-6
score: 28.1
NoneNo IPR availablePANTHERPTHR19862FAMILY NOT NAMEDcoord: 143..368
coord: 355..694
coord: 2..136
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 184..418
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 7..267
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 451..679

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1053contigE-siliculosus-1a_F_contig1053:12823..20957 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1053.385.1mRNA_E-siliculosus-1a_F_contig1053.385.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1053 12823..20957 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1053.385.1 ID=prot_E-siliculosus-1a_F_contig1053.385.1|Name=mRNA_E-siliculosus-1a_F_contig1053.385.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=727bp
VGCSLEGNRAEIEGGGVVLEGRSTVWLDGSTLLENSAGDQGGGVHGVNAT
VGVVRGSQLVNNTASYYGGGGISLSGASNLTVSDSSFLDNYYFGTSTVGL
GGGVKIIGSYATTTISIADSLFEGNSAIDGGGLYISSDYVLTVSRTVFHD
NVAGVFGGGAVLESNGVAALSSSNFTGGFAWNGGGALEVEGSYVSISDCL
FEGNSNRFAGGAIRVEAEAAVSLDGTTFSNNFISSQSGAGSGGAVSVSAG
TLTATDCKFENNQAFHDDRYDVETDPLEGGGAVIISDGSNATFLDCNFTL
NGGAVGGALLAEGSSTATLTNVAFTSNQAGVYGGALSFYEESVCLMNASH
VGANTAAFGGGGMFLSEATGELDGVAFVGNSVSAGSGGAVFFSLGTNATV
TGGVFSSNTATGAGGHVVVADAHTNVELLPDAAASGVGTTTATPLVLSGG
EAGTDGGAVHAYSGAAVSAVSVEMSGNRAGRNGGAVSVDGARVVVADGCN
VTGNECGGDGGGVSVADAYFVGTGTNFSKNEAGSDGGGVRAFTGADVVLE
GCVVDGNTAQLGGGVSSVDASLVASGCYVTGNTASTDGGGLRASYLSKVV
LDACEVSFNTAGFDGGGVALDASSDTDNDDLNAANASSALDCRSGAFEGN
HAGERGGAVYVTRESVLSFEGCGSFGNSASLGASVYASHSFVTLSEGSVL
ANDEVPTGAMVYALSTQLVAWNASFSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence
IPR039448Beta_helix
IPR012334Pectin_lyas_fold
IPR006626PbH1