Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1053.383.1 vs. uniprot
Match:
D8LRF8_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF8_ECTSI)
HSP 1 Score: 355 bits (910), Expect = 4.520e-115
Identity = 225/237 (94.94%), Postives = 230/237 (97.05%), Query Frame = 1
Query: 175 MTVSTAAQLATLVESTNCSDGAFVVSWQGALTLPEPVVVGNSTTLSIEGAGDGAVLDGGGGSRLFQVSGGASLFLQNLELRNGSAPYYNGGGAIYADGEDVSLLVSSCNFTANRASLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVTARKTLFLANVAEGPNSGWDDFDVGVGGAVGLSGGTPQLAFHECELRHNNATDDGGAVYSDSGASITVNSTLLDGNWAG 885
MTVSTAAQLATLVESTNCSDGAFVVSWQGALTL EPVVVGNSTTLSIEG GDG+VLDGGGGSRLFQVSGGASLFLQNLELRNGSAPYYNGGGAIYADGE VSLLVSSCNFTANRA LDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVTARKTLFLANVAEGPNS WD+FDVGVGGAVGLSGGTPQLAFHECELRHNNAT GGAVYSD+GAS+T+NSTLLDGNWAG
Sbjct: 1 MTVSTAAQLATLVESTNCSDGAFVVSWQGALTLSEPVVVGNSTTLSIEGVGDGSVLDGGGGSRLFQVSGGASLFLQNLELRNGSAPYYNGGGAIYADGEHVSLLVSSCNFTANRAPLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVTARKTLFLANVAEGPNSAWDNFDVGVGGAVGLSGGTPQLAFHECELRHNNATSYGGAVYSDAGASVTMNSTLLDGNWAG 237
BLAST of mRNA_E-siliculosus-1a_F_contig1053.383.1 vs. uniprot
Match:
A0A6H5JWU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWU3_9PHAE)
HSP 1 Score: 208 bits (530), Expect = 1.700e-64
Identity = 106/118 (89.83%), Postives = 112/118 (94.92%), Query Frame = 1
Query: 175 MTVSTAAQLATLVESTNCSDGAFVVSWQGALTLPEPVVVGNSTTLSIEGAGDGAVLDGGGGSRLFQVSGGASLFLQNLELRNGSAPYYNGGGAIYADGEDVSLLVSSCNFTANRASLD 528
M VSTAAQLATLVE+TNCS+GAFVVSWQGALTL EPV+VGNSTTLS+EG GDGAVLDGGGGSRLFQVSGGASLFL+NLELRN SAPYY+GGGAIYADGEDVSLLVSSCNFT NRA LD
Sbjct: 1 MNVSTAAQLATLVENTNCSNGAFVVSWQGALTLSEPVLVGNSTTLSVEGVGDGAVLDGGGGSRLFQVSGGASLFLENLELRNASAPYYSGGGAIYADGEDVSLLVSSCNFTGNRAPLD 118
BLAST of mRNA_E-siliculosus-1a_F_contig1053.383.1 vs. uniprot
Match:
A0A6H5JUM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUM3_9PHAE)
HSP 1 Score: 164 bits (415), Expect = 6.840e-42
Identity = 78/84 (92.86%), Postives = 82/84 (97.62%), Query Frame = 1
Query: 643 AVTARKTLFLANVAEGPNSGWDDFDVGVGGAVGLSGGTPQLAFHECELRHNNATDDGGAVYSDSGASITVNSTLLDGNWAGGYG 894
AVTA+KTLFL+NVAEGPNSGWDDFDVGVGGAVGLSGGTPQ+AFHECELR NNATD+GGAVYSDSGASITV STLLDGNWAGGYG
Sbjct: 7 AVTAQKTLFLSNVAEGPNSGWDDFDVGVGGAVGLSGGTPQVAFHECELRRNNATDNGGAVYSDSGASITVTSTLLDGNWAGGYG 90
BLAST of mRNA_E-siliculosus-1a_F_contig1053.383.1 vs. uniprot
Match:
A0A836CF41_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF41_9STRA)
HSP 1 Score: 68.2 bits (165), Expect = 4.890e-9
Identity = 42/108 (38.89%), Postives = 59/108 (54.63%), Query Frame = 1
Query: 208 LVESTNCSDGAFVVSWQGALTLPEPVVVGNSTTLSIEGAG---DGAVLDGGGGSRLFQVSGGASLFLQNLELRNGSAPY--YNGGGAIYADGEDVSLLVSSCNFTANR 516
L E+T C V W+G + L EP++VGN T+L I+G G D A + G +++ V GAS+ L++LELR+G A +G G D LLV +C F NR
Sbjct: 40 LTEATVCPGQNITVKWRGFVGLTEPIIVGNGTSLVIDGVGTESDPAAISGQNKTQVLHVQKGASVTLRHLELRDGRAMVDGISGEGGAVRVFRDGQLLVEACQFRLNR 147
BLAST of mRNA_E-siliculosus-1a_F_contig1053.383.1 vs. uniprot
Match:
A0A836CDQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDQ4_9STRA)
HSP 1 Score: 66.6 bits (161), Expect = 1.470e-8
Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 1
Query: 208 LVESTNCSDGAFVVSWQGALTLPEPVVVGNSTTLSIEGAG---DGAVLDGGGGSRLFQVSGGASLFLQNLELRNGSAPYYNGGGAIYADGEDVSLLVSSCNFTANRAS 522
L E+ C D V W+G + + EP++VG+ TTL I G G + A + G ++L +V GAS+ LQ L LR+G GGAI+ DG+ S+ F N A+
Sbjct: 45 LTEAAACRDQNITVQWRGFVNVTEPIIVGDGTTLVINGWGADSEPAAISGQHATQLLRVQNGASVTLQELRLRDGFVEAGGDGGAIFNDGD---FTCSNSTFAINTAA 149
BLAST of mRNA_E-siliculosus-1a_F_contig1053.383.1 vs. uniprot
Match:
A0A835Z719_9STRA (UCH domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z719_9STRA)
HSP 1 Score: 66.6 bits (161), Expect = 1.640e-8
Identity = 42/108 (38.89%), Postives = 58/108 (53.70%), Query Frame = 1
Query: 208 LVESTNCSDGAFVVSWQGALTLPEPVVVGNSTTLSIEGAG---DGAVLDGGGGSRLFQVSGGASLFLQNLELRNGSAPY--YNGGGAIYADGEDVSLLVSSCNFTANR 516
L E+T C V W+G + L EP++VGN T+L I+G G D A + G +++ V GAS+ L++LELR G A +G G D LLV +C F NR
Sbjct: 40 LTEATVCPGQNITVKWRGFVGLTEPIIVGNGTSLVIDGVGTESDPAAISGQNKTQVLHVQKGASVTLRHLELRVGRAMVDGISGEGGAVRVFRDGQLLVEACQFRLNR 147
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1053.383.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 6
0 1 Expect = 4.52e-115 / Id = 94.94 Expect = 1.70e-64 / Id = 89.83 Expect = 6.84e-42 / Id = 92.86 Expect = 4.89e-9 / Id = 38.89 Expect = 1.47e-8 / Id = 37.04 Expect = 1.64e-8 / Id = 38.89 Sequence D8LRF8_ECTSI A0A6H5JWU3_9PHAE A0A6H5JUM3_9PHAE A0A836CF41_9STRA A0A836CDQ4_9STRA A0A835Z719_9STRA back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1053.383.1
>prot_E-siliculosus-1a_F_contig1053.383.1 ID=prot_E-siliculosus-1a_F_contig1053.383.1|Name=mRNA_E-siliculosus-1a_F_contig1053.383.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=298bp
SSSSINSRGATSTLGTATTTTTTTTSALLLSLAVFAGRFSSSFAQQAAPP back to top mRNA from alignment at E-siliculosus-1a_F_contig1053:4225..6658-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1053.383.1 ID=mRNA_E-siliculosus-1a_F_contig1053.383.1|Name=mRNA_E-siliculosus-1a_F_contig1053.383.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2434bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1053:4225..6658- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)AGCAGCAGCAGCATCAACAGCAGGGGTGCAACGAGCACTCTCGGTACGGC
AACGACGACCACGACGACCACGACGTCGGCGCTGCTGCTGTCCTTAGCGG
TCTTCGCCGGCCGTTTTTCGTCGTCCTTCGCGCAGCAGGCAGCGCCGCCC
GCCTGCTCCCCAGCATCTGCGGAGATGACGGTGTCCACCGCTGCGCAGCT
GGCGACCCTGGTGGAAAGCACCAACTGCTCCGATGGGGCGTTCGTGGTGT
CCTGGCAGGGGGCGCTGACCCTGCCGGAGCCGGTGGTGGTGGGGAACTCT
ACCACGTTGTCGATCGAGGGGGCTGGGGACGGCGCTGTTTTGGATGGCGG
TGGTGGTAGTCGGCTCTTTCAG GTGTGTTGTTGTTGTTGTTGTTGTTGTT
GTTTGTGTTTTCGTGGTGGTGGTGGTTTTGTTGTTGGTTATCATCATGTA
CACAGTACAGCGCCGACTTATTCGTGATCTCGACTGAAGCCGCAAGTTGT
TGTCGATGTTGTGTTGATGTTGATGTTTATCGTGTTGTTGCTGTTGCTGT
AGTTGCTGGTCATGCATGCATATCATATACACAGCAGTACAGCGCATGAT
TGATGTATTCTCGACTCGAGCCAACCGCCACCAAATTTGACCACACTCGG
GTCGTTTTCCTCCTTAACCCTCGCTATGCCCTTGGACCCAACCCGGCGTC
ATAGGTATCTGGGGGAGCCTCTCTGTTTTTGCAAAACTTGGAGCTGCGGA
ATGGGTCGGCGCCCTACTACAACGGTGGCGGTGCCATCTACGCCGACGGC
GAGGATGTATCCCTTCTG GTGCGCACTCCACTGTCGTTGTTGTTTGTTGT
TTGTTGATGTTGCTGCTGCTGTTGCTGGTGTTGAGCATGATGTTTGTGTT
GGGTTTGTTGTTGCTTCTGCTGTGGTTGCTGCTGCTGCTGGTTGTGATGT
TGGTCGTGTCGTTGCTGCTGCTGCTGCTGCTTCTGCTGCTGCTGCTACTG
CTGCTGCTGCTTCTTCTGCTTCTTCTTCTGCTGCTGCTGCTACTGCTGCT
GCTGCTGCTGCTGCTGTTGCTGTCGCTGCTGCTGTTGCTGTTGCTGCTGC
TGCTGTTGCTGTTGCTGTCGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTG
CCGTATTGTAGGTCGGCTGTTGTCCTACCTCCTACCCTGAGCATCCTCTC
GAGTGTTATTCCATTTACAGCAGTTGTGGTCCCGCTATAAAAGCGTGGGT
TGAACACTGCCCGGTATAATGCCGGTGGAATCGTCAGGCTTAGATGGAAT
ATTCAAGGTGTTCCATACTCTGAGTACGGCCGGTTGCCCGCTATATTGCT
GGTCCTGGCTCCAACGCTGGTCGTGGCACCAATGCTTGTCCTGTCACCTA
CCGCCGGCAGGACACTTGATTATTCTGGGACCACCTCTGTGTTGAGATCC
AATCAGCCCACCAACCACCCTCTCGCCGTGTCTCGATTCGTGCCGGCGTC
CGAGATCCACCGCGAAACACACTTCACCCGTGGCTCAAACCCATCGGCCC
GTGCTGATAATCTCTCCCCCGCCCGGGTACCCCCCCTCCAAATGTATGTG
AACATCGCTCAGGTATCATCGTGTAACTTCACGGCCAACAGGGCTTCCCT
CGATGGAGGCGCTATCCTGTCGACGGGTGCTGGCTCCATCATTGCTCTGA
ACGACTGTCGCTTCGAAG GTACACGCGGCGTGGAAAAGGCCCTTGTGTTG
ATCGAATGTTTTTTTTGTTTTCGTGGGGGGGGAGGGGAGGGGGGGGCGTG
TGCGTCTGTTGATTTCTTGTAGATGTTCGTATTGTTGTCGGTGAGCCTGT
ACAAGGTAACCACGGGGATTCGGTTGTTTGACGGCTGGAGTACGCAGAGC
AAAATTTCATGGCCTGATTTTCAGTGCGAAGACTGCAGAACAACAGCAGC
AGCAACAAAATCGCCAACAACAGCAACAACAGCAACTGCCCAACAACAGC
GAAAGCAACAACAACAACAACAACAACAACAACAACAAACAATACCAAAC
AACACCACCACCGACACCATCATCATCACCACCAACCACCACCACCACCA
CCAACAACAACAACAACACAACAACCACACAGGCAACACGGCCGAGCATC
AAGGAGGAGCGGTGATGGCCATCTCCGCCTCGGCGGTTACCGCGCGCAAG
ACCCTCTTCCTGGCCAACGTAGCGGAAGGACCAAACTCCGGCTGGGACGA
CTTTGACGTCGGCGTCGGCGGGGCCGTCGGCCTGTCGGGAGGCACGCCTC
AGCTGGCTTTCCACGAGTGCGAGCTCCGGCACAACAACGCCACCGACGAC
GGAGGTGCGGTCTATTCGGATTCCGGCGCTAGCATCACGGTGAATTCCAC
CTTGCTCGACGGGAACTGGGCGGGGGGATACGGC back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1053:4225..6658-
>mRNA_E-siliculosus-1a_F_contig1053.383.1 ID=mRNA_E-siliculosus-1a_F_contig1053.383.1|Name=mRNA_E-siliculosus-1a_F_contig1053.383.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1788bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1053:4225..6658- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top