prot_E-siliculosus-1a_F_contig1053.382.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1053.382.1
Unique Nameprot_E-siliculosus-1a_F_contig1053.382.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length268
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1053.382.1 vs. uniprot
Match: D8LRF8_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF8_ECTSI)

HSP 1 Score: 434 bits (1117), Expect = 1.010e-146
Identity = 247/268 (92.16%), Postives = 254/268 (94.78%), Query Frame = 0 
Query:    1 QVDVLDSVFTGNFASDTASWSSSVFHAGGALFVSGQAAVSIKASSFTGNGAEGAXXXXXXXXXXXXXXXXXXXXXLGNAQGGGIMINNEGPFDVNFTDTVFSDNWSGGNGGGLWAFLTAGNLTLLRTNFSNNAVAYREGFFDVPNSHRGGGVWVSGDGEMAVQAEDCHLERNEAGAQGGGMAVDGGVLRTAGCGFSGNVAGRGGAIAAAGEDXXSAAVVFVSGGYMRGNSAELSSWNLWYGYGGGLFAQDGAQAVLDGVALDGNSAGF 268
            QVDVLDSVFTGNFASD+ASWSSS+ H GGAL+V GQAAVSIK+SSFTGNGAEG XXXXXXXXXXXXXXXXXXXXXLGNAQGGGIMI NEGPFDVNFTDT FSDNWSGGNG GLWAFLTAGNLTLLRTNFSNNAVAYREGFFDVPNSHRGGGVWVSGDGEMAVQAEDCHLE NEAGAQGGGMA+DGGVLR AGCGFSGNVAGRGGAIAAAGED  SAAVVFV GG+MRGNSAEL +W LWYGYGGGLFAQDGAQAVLDGVALDGNSAGF
Sbjct:  251 QVDVLDSVFTGNFASDSASWSSSLSHVGGALYVFGQAAVSIKSSSFTGNGAEGXXXXXXXXXXXXXXXXXXXXXXLGNAQGGGIMIINEGPFDVNFTDTAFSDNWSGGNGAGLWAFLTAGNLTLLRTNFSNNAVAYREGFFDVPNSHRGGGVWVSGDGEMAVQAEDCHLEGNEAGAQGGGMAIDGGVLRAAGCGFSGNVAGRGGAIAAAGEDDDSAAVVFVRGGFMRGNSAELGAWGLWYGYGGGLFAQDGAQAVLDGVALDGNSAGF 518
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BLAST of mRNA_E-siliculosus-1a_F_contig1053.382.1 vs. uniprot
Match: A0A6H5JUM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUM3_9PHAE)

HSP 1 Score: 412 bits (1060), Expect = 1.250e-133
Identity = 242/268 (90.30%), Postives = 246/268 (91.79%), Query Frame = 0 
Query:    1 QVDVLDSVFTGNFASDTASWSSSVFHAGGALFVSGQAAVSIKASSFTGNGAEGAXXXXXXXXXXXXXXXXXXXXXLGNAQGGGIMINNEGPFDVNFTDTVFSDNWSGGNGGGLWAFLTAGNLTLLRTNFSNNAVAYREGFFDVPNSHRGGGVWVSGDGEMAVQAEDCHLERNEAGAQGGGMAVDGGVLRTAGCGFSGNVAGRGGAIAAAGEDXXSAAVVFVSGGYMRGNSAELSSWNLWYGYGGGLFAQDGAQAVLDGVALDGNSAGF 268
            QVDVLDSVFTGNFASD ASWSSSV HAGGAL++ GQAAVSIK+SSFTGNGAEGAXXXXXXXXXXXXXXXXXXXXXLGNAQGGGIMI NEGPFDVNFTDTV SDNWSGGNGGGLWAFL AGNL LLRTNFSNNAVAYREGFFDVP SHRGGGVWVSG+GEM VQAE CHLE NEA AQGGGMAVDGGVLR A CGFSGNVAGRGGAIAA    XX   VVFVSGGYMRGNSAEL SWNLWYGYGGGLFAQDGAQAVLDGVALDGNSAGF
Sbjct:  101 QVDVLDSVFTGNFASDMASWSSSVSHAGGALYIVGQAAVSIKSSSFTGNGAEGAXXXXXXXXXXXXXXXXXXXXXLGNAQGGGIMIINEGPFDVNFTDTVLSDNWSGGNGGGLWAFLNAGNLILLRTNFSNNAVAYREGFFDVPGSHRGGGVWVSGNGEMTVQAEGCHLEGNEADAQGGGMAVDGGVLRAADCGFSGNVAGRGGAIAAXXXXXXXXXVVFVSGGYMRGNSAELISWNLWYGYGGGLFAQDGAQAVLDGVALDGNSAGF 368
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1053.382.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRF8_ECTSI1.010e-14692.16Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JUM3_9PHAE1.250e-13390.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 25..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1053contigE-siliculosus-1a_F_contig1053:998..3455 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1053.382.1mRNA_E-siliculosus-1a_F_contig1053.382.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1053 996..3455 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1053.382.1 ID=prot_E-siliculosus-1a_F_contig1053.382.1|Name=mRNA_E-siliculosus-1a_F_contig1053.382.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=268bp
QVDVLDSVFTGNFASDTASWSSSVFHAGGALFVSGQAAVSIKASSFTGNG
AEGAGAAYFYGSNSISVEGSSFVGNLGNAQGGGIMINNEGPFDVNFTDTV
FSDNWSGGNGGGLWAFLTAGNLTLLRTNFSNNAVAYREGFFDVPNSHRGG
GVWVSGDGEMAVQAEDCHLERNEAGAQGGGMAVDGGVLRTAGCGFSGNVA
GRGGAIAAAGEDDDSAAVVFVSGGYMRGNSAELSSWNLWYGYGGGLFAQD
GAQAVLDGVALDGNSAGF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence