prot_E-siliculosus-1a_F_contig1052.379.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
ZOOM
x 1
POSITION
0
MDPRFKATVVLPGDDVTETTTRTTRSLRLGPGLVQHAQDKVLATRAGVLRYRPPCSYWVESNGRRYGARVEDQVLGIVEDRMADSYKVNIFGSCAALLGMLEFDGASKRSKPNLRTGSLVFCRVAAVNKDMETELTCTSTHHGSKKDWMTGQSTFGELRGGKMERCSLLLSKSLTKPDCRVLKSLAKHMPFELAAGLNGTFWVDSGSEAHTIVICNAILNSEVMTDAQTDAMVDRLAKHMKKGLAAMDT*20406080100120140160180200220240Expect = 5.1E-8 / Score = 32.7Expect = 4.5E-7 / Score = 31.8Expect = 1.2E-25 / Score = 91.0Score = Score = Expect = 1.2E-8 / Score = 35.2Expect = 5.4E-22 / Score = 79.3Score = Score = Score = SequencePF18311G3DSA:2.40.50.100G3DSA:2.40.50.140PTHR21321:SF1SSF110324PF15985G3DSA:3.30.1370.10SSF54791PTHR21321SSF50249
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041054Exosome complex exonuclease Rrp40, N-terminalPFAMPF18311Rrp40_Ncoord: 23..65
e-value: 5.1E-8
score: 32.7
NoneNo IPR availableGENE3D2.40.50.100coord: 7..67
e-value: 4.5E-7
score: 31.8
NoneNo IPR availableGENE3D2.40.50.140coord: 69..143
e-value: 1.2E-25
score: 91.0
NoneNo IPR availablePANTHERPTHR21321:SF1EXOSOME COMPLEX COMPONENT RRP40coord: 7..241
NoneNo IPR availableSUPERFAMILY110324Ribosomal L27 protein-likecoord: 8..63
IPR004088K Homology domain, type 1PFAMPF15985KH_6coord: 162..208
e-value: 1.2E-8
score: 35.2
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 153..239
e-value: 5.4E-22
score: 79.3
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 160..241
IPR026699Exosome complex RNA-binding protein 1/RRP40/RRP4PANTHERPTHR21321PNAS-3 RELATEDcoord: 7..241
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 65..147