mRNA_E-siliculosus-1a_F_contig16488.3673.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig16488.3673.1 vs. uniprot
Match: A0A5R9AHF4_9FLAO (HTTM domain-containing protein n=1 Tax=Maribacter sp. ACAM166 TaxID=2508996 RepID=A0A5R9AHF4_9FLAO) HSP 1 Score: 387 bits (995), Expect = 6.940e-131 Identity = 187/250 (74.80%), Postives = 205/250 (82.00%), Query Frame = 1
Query: 1 FKKKYINKSVEAAPLAVFRILFGLMMFLSIIRFWSYGWIDKLYIQPKFFFSYYGIEWIKPFGNYTHLLFGICGLSAIFITLGYKYRIAILVFFLSFTYIELMDKTTYLNHYYFISASSFLMLFLPPNAYFS*DAFQNPKKAFQQIPAWTINSLKLLLGIVYFYAGLAKLNSDWLFKAMPLKIWLPSKFDIPLLGNLLSQEWVQYAFSWVGAGYDLAFLFYCFIKKQELLALYXXXXFMF*REFCFPSECF 750
FK+KYIN EAAPLAVFRILFGLMM +SI+RFWSYGWIDKLYIQPKFFFSYYG EWIKP G+YT+L+F +C LSA+F+ LGYKY+IAI+ FFLSFTYIELMDKTTYLNHYYF+SA SFLM+FLP NAYFS DAF+NPKKAFQ +P WTIN +KLLLGIVYFYAGLAKLNSDWL KAMPLKIWLPSKFD PLLG+LLSQEWVQYAFSWVG GYDLA F +K A F FP F
Sbjct: 4 FKQKYINNLAEAAPLAVFRILFGLMMLISIVRFWSYGWIDKLYIQPKFFFSYYGFEWIKPLGHYTYLIFVVCALSAVFVALGYKYKIAIITFFLSFTYIELMDKTTYLNHYYFVSALSFLMIFLPANAYFSLDAFRNPKKAFQHVPVWTINCIKLLLGIVYFYAGLAKLNSDWLVKAMPLKIWLPSKFDTPLLGDLLSQEWVQYAFSWVGTGYDLAIPFLLLYRKTRTFAFVLVVIFHVLTRVLFPIGMF 253
BLAST of mRNA_E-siliculosus-1a_F_contig16488.3673.1 vs. uniprot
Match: A0A5B7SVV6_9FLAO (HTTM domain-containing protein n=1 Tax=Aggregatimonas sangjinii TaxID=2583587 RepID=A0A5B7SVV6_9FLAO) HSP 1 Score: 382 bits (981), Expect = 9.180e-129 Identity = 187/249 (75.10%), Postives = 208/249 (83.53%), Query Frame = 1
Query: 4 KKKYINKSVEAAPLAVFRILFGLMMFLSIIRFWSYGWIDKLYIQPKFFFSYYGIEWIKPFGNYTHLLFGICGLSAIFITLGYKYRIAILVFFLSFTYIELMDKTTYLNHYYFISASSFLMLFLPPNAYFS*DAFQNPKKAFQQIPAWTINSLKLLLGIVYFYAGLAKLNSDWLFKAMPLKIWLPSKFDIPLLGNLLSQEWVQYAFSWVGAGYDLAFLFYCFIKKQELLALYXXXXFMF*REFCFPSECF 750
++KYI KSVEAAPLAVFRILFGLMM LSI+RFWSYGWI KLYI+PK FFSYYG EW+KP G+YT+L+F IC LSAIF+ +GYKY++AIL FFLSFTYIELMDKTTYLNHYYFISA SFLMLFLP N YFS DA +NPK AFQ++PAWT+NS+KLLLGIVYFYAGLAKLNSDWLFKAMPLKIWLPSKFDIPLLG+LLSQEWVQYAFSW GAGYDLA F +K ++A F FP F
Sbjct: 5 REKYIFKSVEAAPLAVFRILFGLMMLLSIVRFWSYGWIQKLYIEPKLFFSYYGFEWVKPLGDYTYLIFLICALSAIFVAVGYKYKLAILTFFLSFTYIELMDKTTYLNHYYFISALSFLMLFLPANVYFSADAKRNPKIAFQRVPAWTLNSIKLLLGIVYFYAGLAKLNSDWLFKAMPLKIWLPSKFDIPLLGDLLSQEWVQYAFSWAGAGYDLAIPFLLLYRKTRVMAFALVVVFHVLTRVLFPIGMF 253
BLAST of mRNA_E-siliculosus-1a_F_contig16488.3673.1 vs. uniprot
Match: UPI00188B71C9 (HTTM domain-containing protein n=3 Tax=Zobellia TaxID=112040 RepID=UPI00188B71C9) HSP 1 Score: 370 bits (949), Expect = 6.450e-124 Identity = 183/250 (73.20%), Postives = 200/250 (80.00%), Query Frame = 1
Query: 1 FKKKYINKSVEAAPLAVFRILFGLMMFLSIIRFWSYGWIDKLYIQPKFFFSYYGIEWIKPFGNYTHLLFGICGLSAIFITLGYKYRIAILVFFLSFTYIELMDKTTYLNHYYFISASSFLMLFLPPNAYFS*DAFQNPKKAFQQIPAWTINSLKLLLGIVYFYAGLAKLNSDWLFKAMPLKIWLPSKFDIPLLGNLLSQEWVQYAFSWVGAGYDLAFLFYCFIKKQELLALYXXXXFMF*REFCFPSECF 750
F K+I+ +EAAPLAVFRILFG+MM LSIIRFWSYGWI+KLYIQPKFFFSYYG EW+KP G YT+L+F ICGLSAIF+ LGYKY++AIL FF+SFTYIELMDKTTYLNHYYFIS SFLM+FLP NAYFS DA +PKKAFQ+IPAWTIN +KLLLGIVYFYAGLAKLNSDWL KAMPLKIWLPSKFD PLLG L +EWVQYAFSW GAGYDLA F KK A F FP F
Sbjct: 4 FINKHISAPIEAAPLAVFRILFGVMMLLSIIRFWSYGWIEKLYIQPKFFFSYYGFEWVKPLGVYTYLIFIICGLSAIFVALGYKYKLAILTFFISFTYIELMDKTTYLNHYYFISLLSFLMIFLPANAYFSLDAKYHPKKAFQKIPAWTINGIKLLLGIVYFYAGLAKLNSDWLLKAMPLKIWLPSKFDTPLLGQFLHEEWVQYAFSWFGAGYDLAIPFLLLYKKTRPYAFVVVVVFHVMTRVLFPIGMF 253
BLAST of mRNA_E-siliculosus-1a_F_contig16488.3673.1 vs. uniprot
Match: A0A7H9AS43_9FLAO (HTTM domain-containing protein n=1 Tax=Costertonia aggregata TaxID=343403 RepID=A0A7H9AS43_9FLAO) HSP 1 Score: 367 bits (943), Expect = 5.220e-123 Identity = 177/247 (71.66%), Postives = 201/247 (81.38%), Query Frame = 1
Query: 10 KYINKSVEAAPLAVFRILFGLMMFLSIIRFWSYGWIDKLYIQPKFFFSYYGIEWIKPFGNYTHLLFGICGLSAIFITLGYKYRIAILVFFLSFTYIELMDKTTYLNHYYFISASSFLMLFLPPNAYFS*DAFQNPKKAFQQIPAWTINSLKLLLGIVYFYAGLAKLNSDWLFKAMPLKIWLPSKFDIPLLGNLLSQEWVQYAFSWVGAGYDLAFLFYCFIKKQELLALYXXXXFMF*REFCFPSECF 750
K I VEAAPLAVFRILFGLMMF+ I+RFWSYGWI+KLY++PKF FS+YG EW+KP G YT+++F +CGLSA+ I++GYKYRIAI++FFLSFTYIELMDKTTYLNHYYFIS SFLM+FLP NAYFS DA +NP+KAFQ IPAW+INS+KL+LGIVYFYAGLAKLNSDWL KAMPLKIWLPSKFDIP LGN+LS EWVQYAFSW+GAGYDLA F KK A F FP F
Sbjct: 7 KLIKAPVEAAPLAVFRILFGLMMFMGIVRFWSYGWIEKLYLEPKFHFSFYGFEWVKPIGGYTYIIFLVCGLSALLISIGYKYRIAIIIFFLSFTYIELMDKTTYLNHYYFISILSFLMVFLPANAYFSVDAMKNPQKAFQYIPAWSINSIKLILGIVYFYAGLAKLNSDWLLKAMPLKIWLPSKFDIPFLGNMLSLEWVQYAFSWLGAGYDLAIPFLLLYKKTRSYAFVLVVVFHVLTRVLFPIGMF 253
BLAST of mRNA_E-siliculosus-1a_F_contig16488.3673.1 vs. uniprot
Match: A0A3Q9FFT9_9FLAO (HTTM domain-containing protein n=2 Tax=unclassified Maribacter TaxID=2615042 RepID=A0A3Q9FFT9_9FLAO) HSP 1 Score: 367 bits (942), Expect = 7.170e-123 Identity = 182/250 (72.80%), Postives = 199/250 (79.60%), Query Frame = 1
Query: 1 FKKKYINKSVEAAPLAVFRILFGLMMFLSIIRFWSYGWIDKLYIQPKFFFSYYGIEWIKPFGNYTHLLFGICGLSAIFITLGYKYRIAILVFFLSFTYIELMDKTTYLNHYYFISASSFLMLFLPPNAYFS*DAFQNPKKAFQQIPAWTINSLKLLLGIVYFYAGLAKLNSDWLFKAMPLKIWLPSKFDIPLLGNLLSQEWVQYAFSWVGAGYDLAFLFYCFIKKQELLALYXXXXFMF*REFCFPSECF 750
F K+I EAAPLAVFRILFGLMM +SIIRFWSYGWIDKLYIQPK FFSYYG EW+KP G+YT+LLF ICG+SA F+ LGY+YRI+I+VFFLSFTYIELMDKTTYLNHYYFIS SFLM+FLP AYFS DA +NPKKAFQ IPAWTINS+KLLLGIVY YAGLAKLNSDWLFKAMPLKIWLPSKF IPL+G+LLS+EWV YAFSW GA YDLA F K+ A F FP F
Sbjct: 3 FVAKHIKAPTEAAPLAVFRILFGLMMLISIIRFWSYGWIDKLYIQPKLFFSYYGFEWVKPIGDYTYLLFAICGISAFFVALGYRYRISIIVFFLSFTYIELMDKTTYLNHYYFISILSFLMIFLPAQAYFSVDAARNPKKAFQYIPAWTINSIKLLLGIVYVYAGLAKLNSDWLFKAMPLKIWLPSKFHIPLIGDLLSEEWVHYAFSWTGAIYDLAIPFLLLSKRTRPYAFILVVVFHVLTRVLFPIGMF 252
BLAST of mRNA_E-siliculosus-1a_F_contig16488.3673.1 vs. uniprot
Match: G0L6K3_ZOBGA (Vitamin K-dependent gamma-glutamyl carboxylase n=9 Tax=Flavobacteriaceae TaxID=49546 RepID=G0L6K3_ZOBGA) HSP 1 Score: 366 bits (940), Expect = 1.490e-122 Identity = 179/250 (71.60%), Postives = 198/250 (79.20%), Query Frame = 1
Query: 1 FKKKYINKSVEAAPLAVFRILFGLMMFLSIIRFWSYGWIDKLYIQPKFFFSYYGIEWIKPFGNYTHLLFGICGLSAIFITLGYKYRIAILVFFLSFTYIELMDKTTYLNHYYFISASSFLMLFLPPNAYFS*DAFQNPKKAFQQIPAWTINSLKLLLGIVYFYAGLAKLNSDWLFKAMPLKIWLPSKFDIPLLGNLLSQEWVQYAFSWVGAGYDLAFLFYCFIKKQELLALYXXXXFMF*REFCFPSECF 750
F K+I +EAAPLAVFRILFG+MM LSI+RFWSYGWI+KLYIQPK FFSYYG EW+KP G YT+L+F ICGLSAIF+ LGY+YR+AI++FFLSFTYIELMDKTTYLNHYYFIS FLM+FLP NAYFS DA NPKKAFQ+IPAWT+N +KL+LGIVYFYAGLAKLNSDWLFKAMPLKIWLPSKFD PLLG L +EWVQYAFSW GA YDLA F KK A F FP F
Sbjct: 4 FISKHITAPIEAAPLAVFRILFGVMMLLSIVRFWSYGWIEKLYIQPKLFFSYYGFEWVKPLGAYTYLIFIICGLSAIFVALGYRYRMAIIMFFLSFTYIELMDKTTYLNHYYFISLVGFLMIFLPANAYFSLDAKLNPKKAFQKIPAWTVNGIKLMLGIVYFYAGLAKLNSDWLFKAMPLKIWLPSKFDTPLLGQFLHEEWVQYAFSWFGASYDLAIPFLLLYKKTRPFAFLMVVVFHVTTRVLFPIGMF 253
BLAST of mRNA_E-siliculosus-1a_F_contig16488.3673.1 vs. uniprot
Match: A0A426RJA3_9FLAO (HTTM domain-containing protein n=1 Tax=Maribacter algicola TaxID=2498892 RepID=A0A426RJA3_9FLAO) HSP 1 Score: 365 bits (937), Expect = 4.230e-122 Identity = 178/248 (71.77%), Postives = 198/248 (79.84%), Query Frame = 1
Query: 7 KKYINKSVEAAPLAVFRILFGLMMFLSIIRFWSYGWIDKLYIQPKFFFSYYGIEWIKPFGNYTHLLFGICGLSAIFITLGYKYRIAILVFFLSFTYIELMDKTTYLNHYYFISASSFLMLFLPPNAYFS*DAFQNPKKAFQQIPAWTINSLKLLLGIVYFYAGLAKLNSDWLFKAMPLKIWLPSKFDIPLLGNLLSQEWVQYAFSWVGAGYDLAFLFYCFIKKQELLALYXXXXFMF*REFCFPSECF 750
KKYIN VEAAPLAVFRI FG MM SI+RFW+YGWIDKLYIQP+FFFSYYG EW+KP GN+T+LLF ICGLSA + LGY+YRI+I++FFLSFTYIELMDKTTYLNHYYFIS SFLM+FLP AYFS DA N +KA+Q IPAWTINS+KLLLGIVYFYAG+AKLNSDWLF+AMPLKIWLPSKFDIP +G+LL QEWVQYAFSW GA YDLA F +KK A F FP F
Sbjct: 6 KKYINDPVEAAPLAVFRIFFGFMMLFSILRFWAYGWIDKLYIQPRFFFSYYGFEWVKPIGNFTYLLFAICGLSAFLVALGYRYRISIVLFFLSFTYIELMDKTTYLNHYYFISILSFLMIFLPAEAYFSLDARNNKEKAYQFIPAWTINSIKLLLGIVYFYAGVAKLNSDWLFRAMPLKIWLPSKFDIPFIGDLLGQEWVQYAFSWTGALYDLAIPFLLLVKKTRPYAFVLVIIFHVLTRVLFPIGMF 253
BLAST of mRNA_E-siliculosus-1a_F_contig16488.3673.1 vs. uniprot
Match: UPI001C070EB7 (HTTM domain-containing protein n=2 Tax=Zobellia TaxID=112040 RepID=UPI001C070EB7) HSP 1 Score: 361 bits (926), Expect = 2.020e-120 Identity = 176/250 (70.40%), Postives = 197/250 (78.80%), Query Frame = 1
Query: 1 FKKKYINKSVEAAPLAVFRILFGLMMFLSIIRFWSYGWIDKLYIQPKFFFSYYGIEWIKPFGNYTHLLFGICGLSAIFITLGYKYRIAILVFFLSFTYIELMDKTTYLNHYYFISASSFLMLFLPPNAYFS*DAFQNPKKAFQQIPAWTINSLKLLLGIVYFYAGLAKLNSDWLFKAMPLKIWLPSKFDIPLLGNLLSQEWVQYAFSWVGAGYDLAFLFYCFIKKQELLALYXXXXFMF*REFCFPSECF 750
F K+I+ +EAAPLAVFRILFG+MM LSI+RFWSYGWI+KLYIQPKFFFSYYG EW+KP G+YT+ +F IC LSAIF+TLGYKY++AI+ FFLSFTYIELMDKTTYLNHYYFIS SFLM+FLP NAYFS DA Q AFQ+IPAWT+NS+KL+LGIVYFYAGLAKLNSDWL KAMPLKIWLPSKFD P G+ L +EWVQYAFSW GAGYDLA F KK A F FP F
Sbjct: 4 FISKHISAPIEAAPLAVFRILFGVMMLLSIVRFWSYGWIEKLYIQPKFFFSYYGFEWVKPLGDYTYFIFVICALSAIFVTLGYKYKVAIVTFFLSFTYIELMDKTTYLNHYYFISLLSFLMIFLPANAYFSLDAKQRSHIAFQKIPAWTVNSIKLMLGIVYFYAGLAKLNSDWLLKAMPLKIWLPSKFDTPFFGHFLHEEWVQYAFSWFGAGYDLAIPFLLLYKKTRPFAFIMVVIFHVMTRVLFPIGMF 253
BLAST of mRNA_E-siliculosus-1a_F_contig16488.3673.1 vs. uniprot
Match: UPI00126A5992 (HTTM domain-containing protein n=1 Tax=Pelagihabitans pacificus TaxID=2696054 RepID=UPI00126A5992) HSP 1 Score: 360 bits (925), Expect = 2.770e-120 Identity = 174/249 (69.88%), Postives = 199/249 (79.92%), Query Frame = 1
Query: 4 KKKYINKSVEAAPLAVFRILFGLMMFLSIIRFWSYGWIDKLYIQPKFFFSYYGIEWIKPFGNYTHLLFGICGLSAIFITLGYKYRIAILVFFLSFTYIELMDKTTYLNHYYFISASSFLMLFLPPNAYFS*DAFQNPKKAFQQIPAWTINSLKLLLGIVYFYAGLAKLNSDWLFKAMPLKIWLPSKFDIPLLGNLLSQEWVQYAFSWVGAGYDLAFLFYCFIKKQELLALYXXXXFMF*REFCFPSECF 750
+K+Y+ KSVEAAPLAVFRILFG MMF SI+RFW YGWIDKLYI+P FFFSYYG EW+KP +T+LLF ICGLSAI + +GY+YR+AI+VFFLSF+YIELMDKTTYLNHYYFIS SFLM+FLP N Y++ DA ++P++AFQ IP W INSLKLLLGIVYFYAGLAKLNSDWL KAMPLKIWLPSKFDIP LG+LL +EWVQYAFSW+GAGYDLA F +K A F FP F
Sbjct: 5 RKRYLTKSVEAAPLAVFRILFGTMMFFSIVRFWGYGWIDKLYIRPSFFFSYYGFEWVKPLEGFTYLLFAICGLSAILVAIGYRYRMAIVVFFLSFSYIELMDKTTYLNHYYFISILSFLMIFLPANCYYALDAKRSPERAFQYIPVWAINSLKLLLGIVYFYAGLAKLNSDWLLKAMPLKIWLPSKFDIPFLGDLLGREWVQYAFSWLGAGYDLAIPFLLLYRKTRPFAFGLVVVFHVLTRVLFPIGMF 253
BLAST of mRNA_E-siliculosus-1a_F_contig16488.3673.1 vs. uniprot
Match: UPI00047896B5 (HTTM domain-containing protein n=1 Tax=Maribacter antarcticus TaxID=505250 RepID=UPI00047896B5) HSP 1 Score: 359 bits (921), Expect = 1.120e-119 Identity = 176/250 (70.40%), Postives = 199/250 (79.60%), Query Frame = 1
Query: 1 FKKKYINKSVEAAPLAVFRILFGLMMFLSIIRFWSYGWIDKLYIQPKFFFSYYGIEWIKPFGNYTHLLFGICGLSAIFITLGYKYRIAILVFFLSFTYIELMDKTTYLNHYYFISASSFLMLFLPPNAYFS*DAFQNPKKAFQQIPAWTINSLKLLLGIVYFYAGLAKLNSDWLFKAMPLKIWLPSKFDIPLLGNLLSQEWVQYAFSWVGAGYDLAFLFYCFIKKQELLALYXXXXFMF*REFCFPSECF 750
F K+YIN VEAAPLAVFRILFG+MM S+IRFWSYGWIDKLY+QP +FFSYYG EWIKP G +T+L+F IC +SAIF+ +GY+Y IAI+VFFLSFTYIELMDKTTYLNHYYFIS SF+M+FLP + YFS DA +NPKKA Q +PAWTIN +KLLLG+VYFYAGLAKLNSDWL KAMPLKIWLPSKFDIPLLG+L+SQEWVQYAFSW GA YDLA F +K A F FP F
Sbjct: 4 FLKEYINAPVEAAPLAVFRILFGVMMLGSMIRFWSYGWIDKLYVQPTYFFSYYGFEWIKPLGEFTYLIFFICAVSAIFVAIGYRYTIAIIVFFLSFTYIELMDKTTYLNHYYFISVLSFVMIFLPASTYFSVDATRNPKKANQYVPAWTINCIKLLLGVVYFYAGLAKLNSDWLIKAMPLKIWLPSKFDIPLLGDLVSQEWVQYAFSWSGAMYDLAIPFLLLYRKTRPFAFVLVVVFHVLTRVLFPIGMF 253 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig16488.3673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig16488.3673.1 >prot_E-siliculosus-1a_F_contig16488.3673.1 ID=prot_E-siliculosus-1a_F_contig16488.3673.1|Name=mRNA_E-siliculosus-1a_F_contig16488.3673.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=108bp MMFLSIIRFWSYGWIDKLYIQPKFFFSYYGIEWIKPFGNYTHLLFGICGLback to top mRNA from alignment at E-siliculosus-1a_F_contig16488:8..846+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig16488.3673.1 ID=mRNA_E-siliculosus-1a_F_contig16488.3673.1|Name=mRNA_E-siliculosus-1a_F_contig16488.3673.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=839bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig16488:8..846+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig16488:8..846+ >mRNA_E-siliculosus-1a_F_contig16488.3673.1 ID=mRNA_E-siliculosus-1a_F_contig16488.3673.1|Name=mRNA_E-siliculosus-1a_F_contig16488.3673.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=648bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig16488:8..846+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |