Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 1 |
| Cds size | 315 |
| Model size | 454 |
| Exons | 1 |
| Hectar predicted targeting category | other localisation |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936583.773029-CDS-E-siliculosus-1a_M_contig992:665..980 | 1622936583.773029-CDS-E-siliculosus-1a_M_contig992:665..980 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig992 666..980 + |
| 1696251142.7881207-CDS-E-siliculosus-1a_M_contig992:665..980 | 1696251142.7881207-CDS-E-siliculosus-1a_M_contig992:665..980 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig992 666..980 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936583.800378-UTR-E-siliculosus-1a_M_contig992:980..1119 | 1622936583.800378-UTR-E-siliculosus-1a_M_contig992:980..1119 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig992 981..1119 + |
| 1696251142.800533-UTR-E-siliculosus-1a_M_contig992:980..1119 | 1696251142.800533-UTR-E-siliculosus-1a_M_contig992:980..1119 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig992 981..1119 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig992.17799.1 >prot_E-siliculosus-1a_M_contig992.17799.1 ID=prot_E-siliculosus-1a_M_contig992.17799.1|Name=mRNA_E-siliculosus-1a_M_contig992.17799.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=105bp
RVTWVLRGNSSDYCDSIVSFTSIYSTLLCVALLPVVQDICQIFLWVGRLR
EWRRCTIHVFDAIIFVCFLADRHRGATVRCVARFVRRVHGAGCARSVAGA
VLRS* back to topmRNA from alignment at E-siliculosus-1a_M_contig992:666..1119+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig992.17799.1 ID=mRNA_E-siliculosus-1a_M_contig992.17799.1|Name=mRNA_E-siliculosus-1a_M_contig992.17799.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=454bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig992:666..1119+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CGCGTCACGTGGGTGTTGCGTGGGAATTCATCCGATTATTGCGACTCAAT
CGTTTCTTTTACGTCGATTTATTCAACATTGTTGTGTGTTGCCCTTCTAC
CAGTTGTTCAAGATATTTGTCAGATTTTCCTTTGGGTCGGACGATTGAGA
GAATGGAGACGGTGCACCATTCACGTGTTTGATGCTATTATTTTTGTTTG
TTTCTTAGCTGATAGGCACCGAGGGGCAACGGTTCGCTGCGTTGCTCGTT
TTGTTCGTCGGGTCCATGGGGCAGGGTGCGCTCGTTCCGTTGCAGGTGCA
GTGTTACGGTCTTGAAGTCGTATGCAGATGACACCTCCTTGTTTTGTTAT
TAGCTTTTCTTCCACCCTGGGTTGATCAGGAAGCATCCGAAGAGAAGGAG
GTCACTCTTGGATGTCTGGGTTGGCTTCCACTGATAGGGGAAACGTGATT
GATG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig992:666..1119+ >mRNA_E-siliculosus-1a_M_contig992.17799.1 ID=mRNA_E-siliculosus-1a_M_contig992.17799.1|Name=mRNA_E-siliculosus-1a_M_contig992.17799.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=630bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig992:666..1119+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CGCGTCACGTGGGTGTTGCGTGGGAATTCATCCGATTATTGCGACTCAAT
CGTTTCTTTTACGTCGATTTATTCAACATTGTTGTGTGTTGCCCTTCTAC
CAGTTGTTCAAGATATTTGTCAGATTTTCCTTTGGGTCGGACGATTGAGA
GAATGGAGACGGTGCACCATTCACGTGTTTGATGCTATTATTTTTGTTTG
TTTCTTAGCTGATAGGCACCGAGGGGCAACGGTTCGCTGCGTTGCTCGTT
TTGTTCGTCGGGTCCATGGGGCAGGGTGCGCTCGTTCCGTTGCAGGTGCA
GTGTTACGGTCTTGACGCGTCACGTGGGTGTTGCGTGGGAATTCATCCGA
TTATTGCGACTCAATCGTTTCTTTTACGTCGATTTATTCAACATTGTTGT
GTGTTGCCCTTCTACCAGTTGTTCAAGATATTTGTCAGATTTTCCTTTGG
GTCGGACGATTGAGAGAATGGAGACGGTGCACCATTCACGTGTTTGATGC
TATTATTTTTGTTTGTTTCTTAGCTGATAGGCACCGAGGGGCAACGGTTC
GCTGCGTTGCTCGTTTTGTTCGTCGGGTCCATGGGGCAGGGTGCGCTCGT
TCCGTTGCAGGTGCAGTGTTACGGTCTTGA back to top
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