Homology
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match:
A0A6H5JFI0_9PHAE (Matrin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFI0_9PHAE)
HSP 1 Score: 543 bits (1399), Expect = 1.460e-185
Identity = 352/446 (78.92%), Postives = 358/446 (80.27%), Query Frame = 3
Query: 6 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAMFGGAGXXXXXXXXSAGPXXXXXXXXGPRXXXXXXXXXXXXX------------------------------------------RPACGNPSVRAGAVKGEEXXXXXXXXXXXXXXXTAWDGVLEEGGEWYLDGQTHRDKLAVDAACQFFLTSEGLWVDAVVLAVADSEHPPHDATAAGGSSAGSTATTRRAHFRLDLAYFEAGAEKETVLRGVEAAAVRLPAGEGGAWPXXXXXXXXXXXDENTGLGGWQTVSVRMVDVAAEAEARRVKKEVXXXXXXXXXXXXXREKMLVEAMDADDAMGSYDPWGTGKYKGFEVAKDVPRGPEEEAAGAXXXXXXGPAVSFKKRKGPGNKGKFRKKARDDDE 1217
MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQ AHEKDLAMFGGAG SAGPXXXXXXXX XXXXXXXXXXXXX RPA GNPSVRAG VK EE XXXXXXX AWDGV EEGG+WYLDGQ HRDKLAVDAACQ+FL SEGLWVDAVVLA+ADSE PPHDATAAG +SAG ATTRR LDLAYFEAGAEKETVLRGVEAAAVRLPAGEGGAWP XXXXDENTGLGGWQTVSVRMVDVAAEAEARRVKKEV XXXXXXXXXXXXREKMLVEAMDADDAMGSYDPWGTGKYKGFE+A D PRGPEEEAAG XXXXXXGPAV+FKKRKGPGNKGKFRKKARDDDE
Sbjct: 1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQLAHEKDLAMFGGAGAGSGLGAGSAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATDXXXXXXXXGSXXXRXXXXXXXXXXXXXXXXRPASGNPSVRAGDVKSEEGAAAGREGXXXXXXXAAWDGVFEEGGQWYLDGQIHRDKLAVDAACQYFLNSEGLWVDAVVLALADSEQPPHDATAAGDASAGIMATTRR----LDLAYFEAGAEKETVLRGVEAAAVRLPAGEGGAWPAPREMPPXXXXDENTGLGGWQTVSVRMVDVAAEAEARRVKKEVKXXXXXXXXXXXXREKMLVEAMDADDAMGSYDPWGTGKYKGFEIANDAPRGPEEEAAGXXXXXXXGPAVAFKKRKGPGNKGKFRKKARDDDE 442
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match:
A0A4D9CZ19_9STRA (U1-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ19_9STRA)
HSP 1 Score: 134 bits (337), Expect = 3.380e-30
Identity = 153/445 (34.38%), Postives = 204/445 (45.84%), Query Frame = 3
Query: 6 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAMFGGAGXXXXXXXXSAGPXXXXXXXXGPRXXXXXXXXXXXXXRPACGNPSVRAGAVKG-EEXXXXXXXXXXXXXXXTAWDGVLEEGGEWYLDGQTHRDKLAVDAA------CQFFLTSEGLWVDAVVLAVADSEHPPHDATAA------------GGSSA--GSTATTRRAHFRLDLAYFEAGAEKETVLRGVEAAAVRLPAGEG--GAWPXXXXXXXXXXXDENTGLGGWQTVSVRMVDVAAE---------AEARRVKKEVXXXXXXXXXXXXXREKMLVEAMDADDAMGSYDPWGTGKYKGFEVAKDVPRGPEE---EAAGAXXXXXXGP----AVSFKKRKGPGNKG--KFRKK-ARDDD 1214
MA YW S ++ CK+C VW+ +++ S R H+ G +H + V EFF+ +RE K +G+ + +L +++ IEKAAQ EKD AMF XX XXX XXXXXXXX P P G V G + T E G + +DG T+ + AV+ CQ ++ + W +A+V V + P T GG A G A T+R E + V GV + +RL GE G XXXXXX DE+TGLGGWQTVSVRMVD AE AE++R K+E R +ML EAM+ +DAM SYDP G G YKG ++ + GP E GA G V+F++R+ KG KFR+K AR+DD
Sbjct: 1 MADYWKSTPKHCCKFCNVWMDDNKTSRRLHEGGARHKQAVEEFFKAQREAKRQGSIGDGELSKELREIEKAAQAQAEKDAAMFK-TSVVTTVEXXXXXXXXXRPPTFSLSSRXXXXXXXXGVRHPXXXXPHRVRGDVGGWRDVEKEEKEVNGGSEDVTGGSAAAEVEGRYTVDGVTYLEGKAVETRLVRGTPCQVWVEKDDAWREAIVSRVEVTAVPNTSLTLRKFSVILGARRPDGGKEAKEGQAAVTQREE------------EAKEVEEGVLSDRIRLVEGEHSMGGVDTLPPXXXXXXVDEDTGLGGWQTVSVRMVDEEAERKASEAAVRAESKRRKEE----------DAQRRARMLAEAMEGEDAMSSYDPHGRGIYKGMDLKEGGTEGPGAIVGEVGGAALEVDLGGDQAGPVAFRRRRAGEGKGGGKFRRKRAREDD 422
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match:
F0WHY0_9STRA (Uncharacterized protein AlNc14C105G6187 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHY0_9STRA)
HSP 1 Score: 79.3 bits (194), Expect = 4.340e-12
Identity = 78/310 (25.16%), Postives = 125/310 (40.32%), Query Frame = 3
Query: 6 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAMFGGAGXXXXXXXXSAGPXXXXXXXXGPRXXXXXXXXXXXXXRPACGNPSVRAGAVKGEEXXXXXXXXXXXXXXXTAWDGVLEEGGEWYLDGQTHRDKLAVDAACQFFLTSEGLWVDAVVLAVADSEHPPHDATAAGGSSAGSTATTRRAHFRLDLAYFEAGAEKETVLRGVEAAAVR--LPAG-----------EGGAWPXXXXXXXXXXXDENTGLGGWQTVSVRMV 896
M YW S ERYFCKYC +WL S+R+H++ K+H++ + E + KR+ K+K + + DLK+Q++ IE+ A +D M G + ++ P P+ P AV E+ GV + +LDG+ H ++ +ACQ ++ W DA+V AA S +T+ + R H+++ Y + + + V A +R LPAG + G DE+TG+G W TV VR +
Sbjct: 1 MTEYWKSNERYFCKYCDIWLQGDSISVRHHEKSKRHLDRIQEKLKAKRQAKVKSEREDKDLKKQLDEIERTAHARFAED--MKGKSSKYANNKAFTSKPFRR------PKTKTFSDGTSSWPLYPV---------AVPEEKEPVDERKKDDL--------GVYSVRDQVFLDGKCHEGQIFAQSACQIWVEELEEWRDALV-------------DAAVRHSVPNTSLSLR-HYQIT--YMDPSQNQVITEKEVTADRLRILLPAGTTLEEAEEMIRKAGCGGASDTTESHGPVDESTGMGEWSTVLVREI 269
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match:
A0A5J5BSD2_9ASTE (Matrin-type domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5BSD2_9ASTE)
HSP 1 Score: 73.9 bits (180), Expect = 6.920e-11
Identity = 34/83 (40.96%), Postives = 57/83 (68.67%), Query Frame = 3
Query: 6 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAMF 254
M YWVSQ +C +CK+++SN+ ASIRNH+ G++H + V++ R+DK+ + E + R +E+IE A+R+++KD+A F
Sbjct: 1 MTEYWVSQGNKWCDFCKIFISNNPASIRNHELGQRHKDNVSKKLTTMRQDKVAKEKEEKEAARALEQIEAKAKRSYQKDVATF 83
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match:
A0A397TAV1_9GLOM (Matrin-type domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TAV1_9GLOM)
HSP 1 Score: 73.2 bits (178), Expect = 8.840e-11
Identity = 32/82 (39.02%), Postives = 58/82 (70.73%), Query Frame = 3
Query: 6 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAM 251
M+ YWVSQ++++C+YC++++++++ S H+QGKKH E V +F R R + + E KR++ERIE+AA + ++KD+ +
Sbjct: 1 MSEYWVSQQKHWCQYCRIYIADNKPSRTMHEQGKKHKENVEKFLRDIRRRDHENRKEEEKTKRELERIERAAMKQYKKDIIL 82
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match:
UPI000C1D7CA3 (zinc finger protein ZOP1 isoform X1 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D7CA3)
HSP 1 Score: 72.0 bits (175), Expect = 3.280e-10
Identity = 33/83 (39.76%), Postives = 56/83 (67.47%), Query Frame = 3
Query: 6 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAMF 254
M +WVSQ +C +CK+++SN+ ASIRNH+ G +H + VA+ R+DK+ + + + R +E+IE A+R+++KDL +F
Sbjct: 1 MTEFWVSQGNKWCDFCKIYISNNPASIRNHELGTRHKDNVAKKLNTMRQDKVAKEKEQKEAARVLEQIEAKAKRSYQKDLEVF 83
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match:
A0A2I0I759_PUNGR (zinc finger protein ZOP1 n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0I759_PUNGR)
HSP 1 Score: 70.9 bits (172), Expect = 7.260e-10
Identity = 33/83 (39.76%), Postives = 56/83 (67.47%), Query Frame = 3
Query: 6 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAMF 254
M YWVSQ +C +CK+++SN+ ASIRNH+ G++H + VA+ R+DK + + + R +++IE A+R+++KD+A F
Sbjct: 1 MTEYWVSQGNKWCDFCKIFISNNPASIRNHELGQRHKDNVAKKLDDMRKDKAAKEKQQQEAARAIQQIEAKAKRSYQKDVATF 83
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match:
A0A2P5FZ54_TREOI (U1 small nuclear ribonucleoprotein C n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5FZ54_TREOI)
HSP 1 Score: 69.7 bits (169), Expect = 1.680e-9
Identity = 33/80 (41.25%), Postives = 54/80 (67.50%), Query Frame = 3
Query: 6 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDL 245
M YWVSQ +C +CK++LSN+ ASIRNH+ G++H + VA+ R++K + E + R +E+IE A+R+++KD+
Sbjct: 1 MTEYWVSQGNKWCDFCKIYLSNNPASIRNHELGQRHKDNVAKKLADMRKEKAAKEKEEKEATRLLEQIETKAKRSYQKDM 80
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match:
A0A1Y1UL55_9FUNG (Matrin-type domain-containing protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1UL55_9FUNG)
HSP 1 Score: 69.3 bits (168), Expect = 1.740e-9
Identity = 29/79 (36.71%), Postives = 55/79 (69.62%), Query Frame = 3
Query: 6 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKD 242
M+ YWVS ++Y+CKYCK+++++++ S +NHD G+KH EIV + R ++ K + + +R ++++EKAA + + +D
Sbjct: 1 MSEYWVSNKKYYCKYCKIYITDNKISRQNHDNGRKHKEIVQMYIRDVQKRKQEEDKEAEATRRMLQQVEKAAYKQYSQD 79
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match:
A0A1Y2BXJ3_9FUNG (Matrin-type domain-containing protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2BXJ3_9FUNG)
HSP 1 Score: 69.3 bits (168), Expect = 1.920e-9
Identity = 29/79 (36.71%), Postives = 56/79 (70.89%), Query Frame = 3
Query: 6 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKD 242
M+ YWVS ++Y+CKYCK+++++++ S +NHD G+KH EIV + R ++ K + + + K+ +++I+KAA + + +D
Sbjct: 1 MSEYWVSNKKYYCKYCKIYITDNKISRQNHDNGRKHKEIVQMYIRDVQKRKKEEEKEAEETKKILQQIDKAAYKQYSQD 79
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 25
0 1 Expect = 1.46e-185 / Id = 78.92 Expect = 3.38e-30 / Id = 34.38 Expect = 4.34e-12 / Id = 25.16 Expect = 6.92e-11 / Id = 40.96 Expect = 8.84e-11 / Id = 39.02 Expect = 3.28e-10 / Id = 39.76 Expect = 7.26e-10 / Id = 39.76 Expect = 1.68e-9 / Id = 41.25 Expect = 1.74e-9 / Id = 36.71 Expect = 1.92e-9 / Id = 36.71 Sequence A0A6H5JFI0_9PHAE A0A4D9CZ19_9STRA F0WHY0_9STRA A0A5J5BSD2_9ASTE A0A397TAV1_9GLOM UPI000C1D7CA3 A0A2I0I759_PUNGR A0A2P5FZ54_TREOI A0A1Y1UL55_9FUNG A0A1Y2BXJ3_9FUNG Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1 Stop 1 Cds size 1215 Model size 2130 Exons 8 Ec32 ortholog Ec-10_003350.1 Ec32 ortholog description Zinc finger, U1-type Hectar predicted targeting category other localisation BRITE ko00000,ko01000,ko03041,ko04812 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. A EC 1.6.99.1 EggNOG OGs KOG0150@1,KOG0150@2759 EggNOG free text desc. zinc ion binding GOs GO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003725,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008380,GO:0009791,GO:0009845,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015030,GO:0016070,GO:0016071,GO:0016458,GO:0016604,GO:0019222,GO:0031047,GO:0031974,GO:0031981,GO:0032259,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044728,GO:0045292,GO:0046483,GO:0048519,GO:0048856,GO:0050789,GO:0060255,GO:0065007,GO:0070013,GO:0071005,GO:0071011,GO:0071704,GO:0080188,GO:0090304,GO:0090351,GO:0097159,GO:1901360,GO:1901363,GO:1990904 KEGG Reaction R00282 KEGG ko ko:K00354,ko:K13220,ko:K21768 KEGG rclass RC00001 Seed eggNOG ortholog 2880.D7FI35 Seed ortholog evalue 3.9e-157 Seed ortholog score 561.2 Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622936574.6666353-UTR-E-siliculosus-1a_M_contig99:237294..238204 1622936574.6666353-UTR-E-siliculosus-1a_M_contig99:237294..238204 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig99 237295..238204 - 1696251138.0397627-UTR-E-siliculosus-1a_M_contig99:237294..238204 1696251138.0397627-UTR-E-siliculosus-1a_M_contig99:237294..238204 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig99 237295..238204 - 1622936574.8288379-UTR-E-siliculosus-1a_M_contig99:245063..245068 1622936574.8288379-UTR-E-siliculosus-1a_M_contig99:245063..245068 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig99 245064..245068 - 1696251138.1444979-UTR-E-siliculosus-1a_M_contig99:245063..245068 1696251138.1444979-UTR-E-siliculosus-1a_M_contig99:245063..245068 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig99 245064..245068 -
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig99.17764.1
>prot_E-siliculosus-1a_M_contig99.17764.1 ID=prot_E-siliculosus-1a_M_contig99.17764.1|Name=mRNA_E-siliculosus-1a_M_contig99.17764.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=405bp
MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKRED back to top mRNA from alignment at E-siliculosus-1a_M_contig99:237295..245068-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig99.17764.1 ID=mRNA_E-siliculosus-1a_M_contig99.17764.1|Name=mRNA_E-siliculosus-1a_M_contig99.17764.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7774bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:237295..245068- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)GAGAG ATGGCATCATACTGGGTATCGCAGGAGAGGTACTTTTGCAAGTAC
TGCAAAGTGTGGCTTTCCAACCATCAAGCG GTGAGATTATGCTTGTCTAT
ACATTGGAGTACACAAGTATTGATGCGCGTCGGGTGTTGCTACAGGTAAC
GAGGTGCTGTGGACCGTTGCACTGCTGTAGTCATGATGTCTTCATCTAAA
GAGAGATGCCAGTTACGGAGCAGGTACAGTAGATGATACCTAAAGTTCCC
GCTATGGCATCATTTTTGAAATCATCGTCGTACTGCTTGGACAGCCTACA
GAGCTGGTTGCTCCTTCATTTCTCGGCCGACGTTTGCGCCAGAAACATCA
ACTAAATACTTCGTATGCATACTGATCATGGGTAGGCTCACGGCGTAGCA
GCGGTGTCTCAATGATGGAGAACAGACGGTTAGTTGTCAAGACCATTTAG
TGCAGTGCCGCCGTTTTTCTTCGTTGTTTCTGAAGCGCTGAACCCAACAT
CTTACACCGCAGAGGGTTGGTCTGATTTACATGTGAATCCGCGGCCAGTC
TACACGTCTACACGCGAAGGAAGGGGAGGGGGATGGAATTACCGACAGCT
TGAAATGTGCATACGGCAACGGACGGCAGCCTCCCCGGAATGGAGTGTTT
TGAAGTCGATCGGCAGCGGGGACTCCCTGCTGTAGCATAGCCGCCTACCA
ATGTATCAACAAGTCTTGACGTCTAGTACAGGTACCAGTGAGTCTTGCGT
CACATTCCGAACACACGAAGTATTTCCCTGAAGAATCACAGGGCCGTATA
GTTGCTGTACGGACTGTTATTGTACCATTCGGCCCGAGCGCCCAAACCGG
CACAGCAAGACGGCATTTTCCCTCAGATTGGGCCGCCCCCCCGTGTTGCC
TGCTACTGCTACTTGTTTGGGGCAGCACCAGTATATGCTGATAACATCGC
GCTACCTGCGGATTCCATTGATTTACCACCACCACATTTTTGGCGGATTT
TGTGGTGCTGTTTGACGCGTCGAATGAAGCGGGCACACATGATGACCAGG
ATTCTGAGACAACTCGTGTTAAACTTAAGTAGCGGAATATCGTTGGAGTG
TTGTGCGGATGAGAGATTTTGTAGTGTTCGGCGGTGCGATGTGTGACGGA
GCATGGGGGGGGGCAACGCGGCGAGCGGCTGCCCGGGCGGGTTCCCACCG
ATGCTTTCGCCGCATACCACGGGCGGTGCTGCCATCCTTTCCCCATCCCA
CGACACCAAGTATTGTTTTTCTCGACGCCTGTGCATATCGTTTCGGGAAC
CCACGGAATGCGAGGGAACTGCTAGAAGAAGATTTTCGGCTCACCGGGAG
AATGGGTCCGCGAAAATGGCAACAACAACAACAACAATGCAACAACCAAG
AGCTACATCATTTTTTGTCAACACAATGCGCGCACACCCTTTTTTTTTTC
CTTGTCTGCGGCCGGTTTTTTCAGAGCATTCGCAATCATGACCAAGGCAA
GAAGCACGTCGAGATCGTCGCCGAGTTCTTCCGCAAGAAGCGCGAGGACA
AGCTCAAGGGTGCGCAGAGCGAGTCGGACCTGAAACGGCAGATGGAGAGG
ATCGAAAAG GTGAGGACGAGACGGGGGAAAAGAAATAGTGGCCTCACGGT
GTGTGGGGGGAGGGTTCAGCAGCGGACGAAAGTTAAAAGTTTTGTGTTTC
CACTAGCGGCTGTTGCTTGTTTTTTTCGTTCGCCATATGTGACCATATGC
GTTCCCATATAATGCGGTGGTGGTGGGGCGGGGAAAGGTAGCCCTTGCTT
GAGTACCTATTTGGCGACGCCAAGTGGGCCAGCAGCTGCTTGATCTCCTG
CCGCGCGCCTCCGCAGCGTCCCCTCCCGCAATGAGTTGCTCGTCGCGTGC
CAATCATCATCGTCGTCGGAATCCGGAAACCCTATCTTATGTTTTCGGAT
CACTCTGCGGGCGGCGCCTGTGCTTGCATAGAAACGCCTCCCTGCTCCGC
GAAAGAGACCCCCGAGTTCTTCGCCCCGGCTTCGAGCTATGCGGTCGTGC
ATGGCAACCAACAAACCTACGGCCATGCTAAAGCTACCCAGCGTACGGCC
TCGCCCCACCCACCGCCCTCGTCGTGTGCCATCATGTTTTTTCTCCGCAG
GCGGCGCAAAGAGCGCACGAGAAAGACCTCGCCATGTTCGGCGGCGCCGG
GGCCGGATCAGGATCGGGCGCAGGATCCGCGGGACCCCCACCCCCCCCGC
CCCCCCCGGGAGGCCC GTCGCCGCCCCCCCCGCCTCCGCCACCAGGAGCC
CCGCCGCCGCCGCCCCCCCGGCCGAGTGGCGACGAAGCGGCCGACCGCCC
TCCGCCCCCGCCCCCCCCCGGCTCGCCTCCCGGCCGAAGTAGTAGTCGGG
GCGGAGATACACCGCCGCCGCCGCCGCCGCCGCCGCCAAGGCCTGCATGT
GGAAACCCGTCGGTTCGGGCGGGTGCAGTAAAGGGGGAAGAGGGGGAAGA
AGGGCGGGAGGGGAGCGACGGGGGCGGCGGAGGAGGAACTGCCTGGGACG
GGGTTTTGGAGGAGGGGGGAGAGTGGTATCTGGACGGACAG GTGCGGTGG
GGGAAACGTGATAAATGACATAGTACCGTCAATGTTGTTTTTTGTTGTGG
ATCGAAGGGGGTCGGGGCATCCGACCCCGCAGTTTTTGCTGGTTTTGGGT
TATGGTCTGAAGACGGAGGGCAGTTTTGGGCTACCGTCGTCTTCTGGTCG
TCGTGCTTGGTTGAATCGCGGGTACGTATTGTACGACCTCCGTATAGGTT
TGAAGAACTGTTTGGTGTGCACATTAGTAGTTGCATCCGTCCGAGTGCAT
AGTCGAGACCCGTGCGTTCGTTCGCAACGTTGAGGTGGGGAGGCGGCGAC
GGGGGAGAACGAAGAACGTGTCTGTGGTGACATTCGTGGTTGATTGGACC
CTGCCCTACGGATGCTACAGGTGAACTCGTATACTTGTGGTCGCAGTCCT
CCTTGCGTGGGCCATGTCTTTGCTCCCGTCTTCTCCTTCGTGACGGATTA
CCGTCTGTGGGACGCAAAACATCGCGACCCCTCCCTCCTCCTCTTGCGTC
TTCACGGCAGTCCCTCTCGTCATCCCATACAGGCACATACAGTCGACCCC
GCTTTAAGGACACACCGCGTTTTTTTTTTTTGGAGTGTCCTTAACGCGGG
GAAGTGTCCTTAAGATTCCGGGGCCACTAACTCACCATCCCCGGGGCCAA
TGGAGGTGTAACATGTGTCAAAATACGCGCATTTGAAGCAGGAATGCGAC
CACGAAACTACTGCTGTGCTGCTGTGTTGCTTTAAACTACGACAACACGC
GTTGGAAGGCCGCCACACTACGGCTGTAGTACTCCAATACTGCAGCACGA
TCGATTGTAATGTGCGGCAGTGCGCTGGTGTTGCTGCAGGCTTTTATTAT
TGTCAAGGCGTCATCCTCACGGTGAACATCATGCCCGAGATATCGCGAAC
ACACCTGAGACACATCAATTCGTTGGAACTAGCTCTGATGCGATACACGC
AAGTTACCTGCCACATGGGGACCAAACAAACCCAGTCGACCCCTTAGAAG
GATACTAGGAAACGGTCGGTACAACATATATATGTAAAAAAAATCGGGCA
AATACACAGAAAATAGGACACCGTTCTTCCCCAAAGGAAAAAACACAAAA
AAAAAACAAAATTTAAAATTTAACTCCACGAGAAAGGCAAAAAATCCCAA
ACCCCTGACACGAGAGTAGACTTTGACTGGCACGTGGGTTCGCCACATGG
CTTCAAGCCGGCAGCTGACGACCCGCCAGCAGATGGGAGGAATCTCTCCA
TACCCACACGCAGTAGTGCGGGCTGCAGCAGACCGCTGTCGATGCTATAT
GTACTGCTGTACAGGTGTGCTGCCCCGCAAAAAAATGGGGGGGCCGCGTA
GTGGAAAAGGTACCCCCCCCTATTATTGTATATCTGCGGGGCACCATGTT
CTGGGAAAAAAATGTATCCTTATAGCGGGGAGTTTCCTTAAGATTAGTGT
CCTTAAAGCGGGGACGACTGTAACCACATTTTGTTTTTGCTCGCAAGGTC
TAAAACCCGGGCCCGTATGTGCTGCCTATCTGTTTCGTGGCGGAATTCAT
ACCGCGACCCGCGCAGACGCATCGAGACAAGCTTGCGGTTGACGCCGCCT
GCCAGTTCTTCCTGACTTCTGAGGGCCTGTGGGTCGATGCGGTCGTGCTA
GCGGTAGCCGACTCAGAACATCCACCGCATGACGCTACCGCTGCTGGTGG
TTCCTCAGCTGGATCCACGGCTACCACTCGGCG GTGAGAGCAATGGAGAG
ATTTTTTTTTTTTTTTCTCCCTGCTAGCAACACCAGGGTCCCGCGCTCTC
GTGTCAGCTTCCCCCCAAACAATCTACATTGTCGACACGATGCTTTTGTC
CCTCTCCGTAAAGACTATTTATCTCGGGAAGAGTATTAGTGTAGGTTTAT
CTCCTGACAATCCATCGGGAAAACTGCAAGTGTTGCCTGCGTCTCTGTCC
CTGATAGACGATCAGGAAAATAAGGTGTGTTTCACATTGTCGTCAATTTC
ATATTCAACTCTCACGATCGAGATAGATTTCCTTTTAGCGTTACTCTTTG
CGATGCGTAAACATGCACATATGCGTACGGCTGTTTGCACGTATGGTTGT
GTGTGTGTGAGAAAGGGGTGGCGGTGAGTGGCGAGGAGAGGCATCAGCGC
CGACGGTTTCGCTTTCTTTTTCGAAATTTTCGGGCTTCACTTTGTAGGGC
GGCGTTTTGGCCCCCCTCTGGAAACGAAAGTGTTGGTGCCAAGTTGGCTT
TTCGATCTGCAGGATAGGACTTTTCTGCAGCACCATACACATTGTTTCGC
CTCACAAGAGGAGGTTGTTGACATGGTGTCCAGTTAAGTCATGCCCACCT
GTACCGCCCCCCTGTGATGCATTGGTGAATGTGCCTTTGTTGGCCATGTA
CAGGGAGTTGTCACCGCCCAGCTGTCCCTTGTTCTGGCATGCCATACCTG
GTGTGCTTGGCCATCCCTCCATGCAATTCTCCGGATACCTCACGGCGCGC
TTGGTGATGTGCTCGCTTGGTCCGGTGAAAACCCGGCGTGCTCCGTCCGA
CTTTGTACGACTGCGAAGTCTAACGACTTTGGCATGCATGCACGGCTATG
AGTACACCCCGCTCCGGCCCGCACCACCCAACGCCTTCCTCCGTACAGTA
TAAGGCATGCCCTCGCCGTGTTCTTCACTCTCCCCTCTCACACATCTTGC
CCACCCTCCCCTACCCCACGAGGGCACACTTCAGGTTAGACCTGGCCTAC
TTTGAGGCAGGTGCTGAGAAGGAGACGGTTTTGAGAGGGGTGGAGGCGGC
GGCGGTGCGTCTTCCGGCCGGGGAGGGGGGGGCGTGGCCCCCCCCTCAGG
AGATGCCTCCTCCACCACCACCGGACGAGAACACCGGGCTGGGGGGATGG
CAGACG GTGAGGAAGGACTACGGGGGTGTTGCCATTCACCCTTTATACAG
TAATAAATAAATGGAACCGGATAGCAGTACATCGATCCTAGGGTAAGGGT
AGGGTATTTTTCCTGCGACGAAGGATGGGAGGAGGTCGACTTCCGCTGCC
ACATGGTATCGAGAGTATGAATCTTGTGTTTGTCAGGTGTTGGTGTTGTT
GTTGATGATGACGTACTTTTCGTGGGTTGAACAGCAGTGGTCCTGTGCCG
TTGTGCTGCTCAATATATTTCACTCGCACACCACCAACCACTACCACCGC
CCCCAACGCATTTCAATGCAAAGCATACCAACGAACACCCCGGGCGAGAG
ATCTCCAGGCGATGCCCCGCGCCTTGGCCGCAAACACCCGCCGCGGTCTT
CTGAATGAGATCGAGACGTCCACCCCTCCTCATTTTTTTGCTTGGCGGCG
ACAAACAAAACTTGCTCGTTGCACGTATGCCTCCAGGTAAGCGTACGCAT
GGTGGACGTGGCTGCGGAGGCGGAGGCCAGGCGCGTAAAGAAGGAGGTCA
AGAAGGCGAAGAAGCAAAAACGGGAGGAAAAAACAGAGCGAGAGAAG GTG
GGCGTGCTTACGGGGCTCGGCAGCAAGTGCATGCATGCGGACAGAGTCTG
AGTCCCTCGGAACCTTTGTACTATCTGGTCCCTTGACGCTTTGTGCCCTC
TGTGATCCTTTCGAAGCCGTGTACAGCCCTCTGTGGAAGGAAGGTCGGTG
GGTTCATTGGCTTGGCGTGGTGCGGAGCAGCTCGACTCTTACTCTCTCAC
CGATCGCCTCGATAATTGAGACCTCCCGTGCGGTGTGGGCTTTTGGTCGC
CCCCGCGGACGCTGTGACGACGTAGTTGCAACCGCCCGGTGGTCGGGGTT
TGTGTGCAGAGACGTCGTAGCCCCCCCTCCCCACGGTCGCCACTGACGAA
ATCTCGTCCGTTCTAGCCTGGCAGCTGTGTTCCGGTCACACCACGCGCGA
AAAGGTGCAACGATAAAACGCCACAGCCACGACAATAATCTACAACAGTA
TCGTCGTGACCCATCCCATTGCCCGCCGCCGCCGCCGCCGCCGGCCGCTG
ATTTGCCTGGTGACGATGATTTTTTTCCCACAGATGTTGGTGGAAGCGAT
GGACGCGGACGATGCCATGGGGTCCTACGACCCGTGGGGCACCGGCAAGT
ACAAGGGTTTCGAGGTAGCGAAGGATGTTCCCCGCGGCCCCGAGGAGGAG
GCGGCGGGCGCCGGGGGTGGGGAGGGCGGTGGACCGGCGGTGTCGTTCAA
GAAGAGAAAGGGTCCCGGCAACAAGGGCAAATTCAGGAAGAAGGCCAGGG
ATGATGATGAGTGA AACGTTGGCGGAGGAAGGGGTCTGCCCCCCCCCCAG
GGGGTGTGCGGCGTGTGTTCGCCGGGACCCGGAGGCGAGTGTTGACGGAA
ATATGAGCGACATTGCAGTATGAAAGAAAGCAAGAAGTAGTGGGGCGCGT
TTGCGGTGTGCACTGACTGCGTGTGTGAAGGTGGCAGTGTCATGACGATT
GCTTTCTTCTCCTGGCGGATCGTGATAGATCGAGACTTGGGGGGCCGATT
TCTGCCCAGCCAGCTCGTTTTCACTTTTATTGCCCGCGTATCGAGCTGGT
GTATTAGAGAAGGTTGGAACCAAGCCCCCGTTAAACAACAAGGCCGTAAA
ATCGCTCGTCGTGTGCTGTCACCCTGGGTGATGGACGGCATCCAATCACA
ACTTGTCCCACGTTTTGATGGATTCCGACTGGGGTTACAATACAACTCAC
GAGATGGCGGCGTTCGTCGACCGAGCCTGCGAGAAGCGCTTTCGAGGACC
GAGCTTTCCGTGATGTTTTATTCCAACGACCTTTACAAGTCACTGATTCA
CCTGTCCATAGACCCTTCCAGAGTGAAGTAGCCGTGATCGCTCCGAAAGC
TCCCGTGCGAAGCACAAGTGAGGTTGCTAAGATCAGAGTTGGGATGGAAA
ACAAGTGAAACCGTCCGTCGAGATTGTGGCCACACGTAACGAAGACCTCA
GGTCAACGTTCACTGGAGACGCCAACAAACGCAAGTTTTGTGTACAACTC
TATTGTAGAGAAAATGTTTGGTGGAGTCCACACGCCTCGGGGGGAGAAGT
TTTAGTCTTTAAGGTGTTTCCAATCTCTAGCATGAGAAAAGTGACGGGAA
GTGCGATCTGGCCTCTTGAGAATCTCCGCAATCGCCCACGCACTCTTCAC
AGAGGTCGGGATGAAACACACATG back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig99:237295..245068-
>mRNA_E-siliculosus-1a_M_contig99.17764.1 ID=mRNA_E-siliculosus-1a_M_contig99.17764.1|Name=mRNA_E-siliculosus-1a_M_contig99.17764.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2430bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:237295..245068- (Ectocarpus siliculosus Ec864m_EcPH12_78m male) back to top