mRNA_E-siliculosus-1a_M_contig99.17764.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_M_contig99.17764.1
Unique Name	mRNA_E-siliculosus-1a_M_contig99.17764.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match: A0A6H5JFI0_9PHAE (Matrin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFI0_9PHAE)

HSP 1 Score: 543 bits (1399), Expect = 1.460e-185
Identity = 352/446 (78.92%), Postives = 358/446 (80.27%), Query Frame = 3

Query:    6 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAMFGGAGXXXXXXXXSAGPXXXXXXXXGPRXXXXXXXXXXXXX------------------------------------------RPACGNPSVRAGAVKGEEXXXXXXXXXXXXXXXTAWDGVLEEGGEWYLDGQTHRDKLAVDAACQFFLTSEGLWVDAVVLAVADSEHPPHDATAAGGSSAGSTATTRRAHFRLDLAYFEAGAEKETVLRGVEAAAVRLPAGEGGAWPXXXXXXXXXXXDENTGLGGWQTVSVRMVDVAAEAEARRVKKEVXXXXXXXXXXXXXREKMLVEAMDADDAMGSYDPWGTGKYKGFEVAKDVPRGPEEEAAGAXXXXXXGPAVSFKKRKGPGNKGKFRKKARDDDE 1217
            MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQ AHEKDLAMFGGAG        SAGPXXXXXXXX   XXXXXXXXXXXXX                                          RPA GNPSVRAG VK EE        XXXXXXX AWDGV EEGG+WYLDGQ HRDKLAVDAACQ+FL SEGLWVDAVVLA+ADSE PPHDATAAG +SAG  ATTRR    LDLAYFEAGAEKETVLRGVEAAAVRLPAGEGGAWP       XXXXDENTGLGGWQTVSVRMVDVAAEAEARRVKKEV XXXXXXXXXXXXREKMLVEAMDADDAMGSYDPWGTGKYKGFE+A D PRGPEEEAAG XXXXXXGPAV+FKKRKGPGNKGKFRKKARDDDE
Sbjct:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQLAHEKDLAMFGGAGAGSGLGAGSAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATDXXXXXXXXGSXXXRXXXXXXXXXXXXXXXXRPASGNPSVRAGDVKSEEGAAAGREGXXXXXXXAAWDGVFEEGGQWYLDGQIHRDKLAVDAACQYFLNSEGLWVDAVVLALADSEQPPHDATAAGDASAGIMATTRR----LDLAYFEAGAEKETVLRGVEAAAVRLPAGEGGAWPAPREMPPXXXXDENTGLGGWQTVSVRMVDVAAEAEARRVKKEVKXXXXXXXXXXXXREKMLVEAMDADDAMGSYDPWGTGKYKGFEIANDAPRGPEEEAAGXXXXXXXGPAVAFKKRKGPGNKGKFRKKARDDDE 442

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match: A0A4D9CZ19_9STRA (U1-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ19_9STRA)

HSP 1 Score: 134 bits (337), Expect = 3.380e-30
Identity = 153/445 (34.38%), Postives = 204/445 (45.84%), Query Frame = 3

Query:    6 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAMFGGAGXXXXXXXXSAGPXXXXXXXXGPRXXXXXXXXXXXXXRPACGNPSVRAGAVKG-EEXXXXXXXXXXXXXXXTAWDGVLEEGGEWYLDGQTHRDKLAVDAA------CQFFLTSEGLWVDAVVLAVADSEHPPHDATAA------------GGSSA--GSTATTRRAHFRLDLAYFEAGAEKETVLRGVEAAAVRLPAGEG--GAWPXXXXXXXXXXXDENTGLGGWQTVSVRMVDVAAE---------AEARRVKKEVXXXXXXXXXXXXXREKMLVEAMDADDAMGSYDPWGTGKYKGFEVAKDVPRGPEE---EAAGAXXXXXXGP----AVSFKKRKGPGNKG--KFRKK-ARDDD 1214
            MA YW S  ++ CK+C VW+ +++ S R H+ G +H + V EFF+ +RE K +G+  + +L +++  IEKAAQ   EKD AMF          XX    XXX          XXXXXXXX    P    P    G V G  +               T      E  G + +DG T+ +  AV+        CQ ++  +  W +A+V  V  +  P    T              GG  A  G  A T+R              E + V  GV +  +RL  GE   G       XXXXXX DE+TGLGGWQTVSVRMVD  AE         AE++R K+E              R +ML EAM+ +DAM SYDP G G YKG ++ +    GP     E  GA      G      V+F++R+    KG  KFR+K AR+DD
Sbjct:    1 MADYWKSTPKHCCKFCNVWMDDNKTSRRLHEGGARHKQAVEEFFKAQREAKRQGSIGDGELSKELREIEKAAQAQAEKDAAMFK-TSVVTTVEXXXXXXXXXRPPTFSLSSRXXXXXXXXGVRHPXXXXPHRVRGDVGGWRDVEKEEKEVNGGSEDVTGGSAAAEVEGRYTVDGVTYLEGKAVETRLVRGTPCQVWVEKDDAWREAIVSRVEVTAVPNTSLTLRKFSVILGARRPDGGKEAKEGQAAVTQREE------------EAKEVEEGVLSDRIRLVEGEHSMGGVDTLPPXXXXXXVDEDTGLGGWQTVSVRMVDEEAERKASEAAVRAESKRRKEE----------DAQRRARMLAEAMEGEDAMSSYDPHGRGIYKGMDLKEGGTEGPGAIVGEVGGAALEVDLGGDQAGPVAFRRRRAGEGKGGGKFRRKRAREDD 422

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match: F0WHY0_9STRA (Uncharacterized protein AlNc14C105G6187 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHY0_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 4.340e-12
Identity = 78/310 (25.16%), Postives = 125/310 (40.32%), Query Frame = 3

Query:    6 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAMFGGAGXXXXXXXXSAGPXXXXXXXXGPRXXXXXXXXXXXXXRPACGNPSVRAGAVKGEEXXXXXXXXXXXXXXXTAWDGVLEEGGEWYLDGQTHRDKLAVDAACQFFLTSEGLWVDAVVLAVADSEHPPHDATAAGGSSAGSTATTRRAHFRLDLAYFEAGAEKETVLRGVEAAAVR--LPAG-----------EGGAWPXXXXXXXXXXXDENTGLGGWQTVSVRMV 896
            M  YW S ERYFCKYC +WL     S+R+H++ K+H++ + E  + KR+ K+K  + + DLK+Q++ IE+ A     +D  M G +         ++ P         P+              P          AV  E+                   GV     + +LDG+ H  ++   +ACQ ++     W DA+V              AA   S  +T+ + R H+++   Y +    +    + V A  +R  LPAG           + G              DE+TG+G W TV VR +
Sbjct:    1 MTEYWKSNERYFCKYCDIWLQGDSISVRHHEKSKRHLDRIQEKLKAKRQAKVKSEREDKDLKKQLDEIERTAHARFAED--MKGKSSKYANNKAFTSKPFRR------PKTKTFSDGTSSWPLYPV---------AVPEEKEPVDERKKDDL--------GVYSVRDQVFLDGKCHEGQIFAQSACQIWVEELEEWRDALV-------------DAAVRHSVPNTSLSLR-HYQIT--YMDPSQNQVITEKEVTADRLRILLPAGTTLEEAEEMIRKAGCGGASDTTESHGPVDESTGMGEWSTVLVREI 269

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match: A0A5J5BSD2_9ASTE (Matrin-type domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5BSD2_9ASTE)

HSP 1 Score: 73.9 bits (180), Expect = 6.920e-11
Identity = 34/83 (40.96%), Postives = 57/83 (68.67%), Query Frame = 3

Query:    6 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAMF 254
            M  YWVSQ   +C +CK+++SN+ ASIRNH+ G++H + V++     R+DK+   + E +  R +E+IE  A+R+++KD+A F
Sbjct:    1 MTEYWVSQGNKWCDFCKIFISNNPASIRNHELGQRHKDNVSKKLTTMRQDKVAKEKEEKEAARALEQIEAKAKRSYQKDVATF 83

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match: A0A397TAV1_9GLOM (Matrin-type domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TAV1_9GLOM)

HSP 1 Score: 73.2 bits (178), Expect = 8.840e-11
Identity = 32/82 (39.02%), Postives = 58/82 (70.73%), Query Frame = 3

Query:    6 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAM 251
            M+ YWVSQ++++C+YC++++++++ S   H+QGKKH E V +F R  R    +  + E   KR++ERIE+AA + ++KD+ +
Sbjct:    1 MSEYWVSQQKHWCQYCRIYIADNKPSRTMHEQGKKHKENVEKFLRDIRRRDHENRKEEEKTKRELERIERAAMKQYKKDIIL 82

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match: UPI000C1D7CA3 (zinc finger protein ZOP1 isoform X1 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D7CA3)

HSP 1 Score: 72.0 bits (175), Expect = 3.280e-10
Identity = 33/83 (39.76%), Postives = 56/83 (67.47%), Query Frame = 3

Query:    6 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAMF 254
            M  +WVSQ   +C +CK+++SN+ ASIRNH+ G +H + VA+     R+DK+   + + +  R +E+IE  A+R+++KDL +F
Sbjct:    1 MTEFWVSQGNKWCDFCKIYISNNPASIRNHELGTRHKDNVAKKLNTMRQDKVAKEKEQKEAARVLEQIEAKAKRSYQKDLEVF 83

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match: A0A2I0I759_PUNGR (zinc finger protein ZOP1 n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0I759_PUNGR)

HSP 1 Score: 70.9 bits (172), Expect = 7.260e-10
Identity = 33/83 (39.76%), Postives = 56/83 (67.47%), Query Frame = 3

Query:    6 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDLAMF 254
            M  YWVSQ   +C +CK+++SN+ ASIRNH+ G++H + VA+     R+DK    + + +  R +++IE  A+R+++KD+A F
Sbjct:    1 MTEYWVSQGNKWCDFCKIFISNNPASIRNHELGQRHKDNVAKKLDDMRKDKAAKEKQQQEAARAIQQIEAKAKRSYQKDVATF 83

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match: A0A2P5FZ54_TREOI (U1 small nuclear ribonucleoprotein C n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5FZ54_TREOI)

HSP 1 Score: 69.7 bits (169), Expect = 1.680e-9
Identity = 33/80 (41.25%), Postives = 54/80 (67.50%), Query Frame = 3

Query:    6 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKDL 245
            M  YWVSQ   +C +CK++LSN+ ASIRNH+ G++H + VA+     R++K    + E +  R +E+IE  A+R+++KD+
Sbjct:    1 MTEYWVSQGNKWCDFCKIYLSNNPASIRNHELGQRHKDNVAKKLADMRKEKAAKEKEEKEATRLLEQIETKAKRSYQKDM 80

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match: A0A1Y1UL55_9FUNG (Matrin-type domain-containing protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1UL55_9FUNG)

HSP 1 Score: 69.3 bits (168), Expect = 1.740e-9
Identity = 29/79 (36.71%), Postives = 55/79 (69.62%), Query Frame = 3

Query:    6 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKD 242
            M+ YWVS ++Y+CKYCK+++++++ S +NHD G+KH EIV  + R  ++ K +  +     +R ++++EKAA + + +D
Sbjct:    1 MSEYWVSNKKYYCKYCKIYITDNKISRQNHDNGRKHKEIVQMYIRDVQKRKQEEDKEAEATRRMLQQVEKAAYKQYSQD 79

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Match: A0A1Y2BXJ3_9FUNG (Matrin-type domain-containing protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2BXJ3_9FUNG)

HSP 1 Score: 69.3 bits (168), Expect = 1.920e-9
Identity = 29/79 (36.71%), Postives = 56/79 (70.89%), Query Frame = 3

Query:    6 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQRAHEKD 242
            M+ YWVS ++Y+CKYCK+++++++ S +NHD G+KH EIV  + R  ++ K +  +   + K+ +++I+KAA + + +D
Sbjct:    1 MSEYWVSNKKYYCKYCKIYITDNKISRQNHDNGRKHKEIVQMYIRDVQKRKKEEEKEAEETKKILQQIDKAAYKQYSQD 79

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig99.17764.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JFI0_9PHAE	1.460e-185	78.92	Matrin-type domain-containing protein n=2 Tax=Ecto...	[more]
A0A4D9CZ19_9STRA	3.380e-30	34.38	U1-type domain-containing protein n=2 Tax=Monodops...	[more]
F0WHY0_9STRA	4.340e-12	25.16	Uncharacterized protein AlNc14C105G6187 n=1 Tax=Al...	[more]
A0A5J5BSD2_9ASTE	6.920e-11	40.96	Matrin-type domain-containing protein n=1 Tax=Nyss...	[more]
A0A397TAV1_9GLOM	8.840e-11	39.02	Matrin-type domain-containing protein n=1 Tax=Glom...	[more]
UPI000C1D7CA3	3.280e-10	39.76	zinc finger protein ZOP1 isoform X1 n=2 Tax=Olea e...	[more]
A0A2I0I759_PUNGR	7.260e-10	39.76	zinc finger protein ZOP1 n=1 Tax=Punica granatum T...	[more]
A0A2P5FZ54_TREOI	1.680e-9	41.25	U1 small nuclear ribonucleoprotein C n=2 Tax=Canna...	[more]
A0A1Y1UL55_9FUNG	1.740e-9	36.71	Matrin-type domain-containing protein n=1 Tax=Piro...	[more]
A0A1Y2BXJ3_9FUNG	1.920e-9	36.71	Matrin-type domain-containing protein n=1 Tax=Neoc...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig99	contig	E-siliculosus-1a_M_contig99:237295..245068 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	1215
Model size	2130
Exons	8
Ec32 ortholog	Ec-10_003350.1
Ec32 ortholog description	Zinc finger, U1-type
Hectar predicted targeting category	other localisation
BRITE	ko00000,ko01000,ko03041,ko04812
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	A
EC	1.6.99.1
EggNOG OGs	KOG0150@1,KOG0150@2759
EggNOG free text desc.	zinc ion binding
GOs	GO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003725,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008380,GO:0009791,GO:0009845,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015030,GO:0016070,GO:0016071,GO:0016458,GO:0016604,GO:0019222,GO:0031047,GO:0031974,GO:0031981,GO:0032259,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044728,GO:0045292,GO:0046483,GO:0048519,GO:0048856,GO:0050789,GO:0060255,GO:0065007,GO:0070013,GO:0071005,GO:0071011,GO:0071704,GO:0080188,GO:0090304,GO:0090351,GO:0097159,GO:1901360,GO:1901363,GO:1990904
KEGG Reaction	R00282
KEGG ko	ko:K00354,ko:K13220,ko:K21768
KEGG rclass	RC00001
Seed eggNOG ortholog	2880.D7FI35
Seed ortholog evalue	3.9e-157
Seed ortholog score	561.2
Taxonomic scope	Eukaryota

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig99.17764.1	prot_E-siliculosus-1a_M_contig99.17764.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	polypeptide	E-siliculosus-1a_M_contig99 238205..245063 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622936574.6666353-UTR-E-siliculosus-1a_M_contig99:237294..238204	1622936574.6666353-UTR-E-siliculosus-1a_M_contig99:237294..238204	Ectocarpus siliculosus Ec864m_EcPH12_78m male	UTR	E-siliculosus-1a_M_contig99 237295..238204 -
1696251138.0397627-UTR-E-siliculosus-1a_M_contig99:237294..238204	1696251138.0397627-UTR-E-siliculosus-1a_M_contig99:237294..238204	Ectocarpus siliculosus Ec864m_EcPH12_78m male	UTR	E-siliculosus-1a_M_contig99 237295..238204 -
1622936574.8288379-UTR-E-siliculosus-1a_M_contig99:245063..245068	1622936574.8288379-UTR-E-siliculosus-1a_M_contig99:245063..245068	Ectocarpus siliculosus Ec864m_EcPH12_78m male	UTR	E-siliculosus-1a_M_contig99 245064..245068 -
1696251138.1444979-UTR-E-siliculosus-1a_M_contig99:245063..245068	1696251138.1444979-UTR-E-siliculosus-1a_M_contig99:245063..245068	Ectocarpus siliculosus Ec864m_EcPH12_78m male	UTR	E-siliculosus-1a_M_contig99 245064..245068 -

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_M_contig99:237295..245068-
coding sequence from alignment at E-siliculosus-1a_M_contig99:237295..245068-

protein sequence of mRNA_E-siliculosus-1a_M_contig99.17764.1

>prot_E-siliculosus-1a_M_contig99.17764.1 ID=prot_E-siliculosus-1a_M_contig99.17764.1|Name=mRNA_E-siliculosus-1a_M_contig99.17764.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=405bp
MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKRED
KLKGAQSESDLKRQMERIEKAAQRAHEKDLAMFGGAGAGSGSGAGSAGPP
PPPPPPGGPRGGDTPPPPPPPPPRPACGNPSVRAGAVKGEEGEEGREGSD
GGGGGGTAWDGVLEEGGEWYLDGQTHRDKLAVDAACQFFLTSEGLWVDAV
VLAVADSEHPPHDATAAGGSSAGSTATTRRAHFRLDLAYFEAGAEKETVL
RGVEAAAVRLPAGEGGAWPPPQEMPPPPPPDENTGLGGWQTVSVRMVDVA
AEAEARRVKKEVKKAKKQKREEKTEREKMLVEAMDADDAMGSYDPWGTGK
YKGFEVAKDVPRGPEEEAAGAGGGEGGGPAVSFKKRKGPGNKGKFRKKAR
DDDE*

mRNA from alignment at E-siliculosus-1a_M_contig99:237295..245068-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_M_contig99.17764.1 ID=mRNA_E-siliculosus-1a_M_contig99.17764.1|Name=mRNA_E-siliculosus-1a_M_contig99.17764.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7774bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:237295..245068- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GAGAGATGGCATCATACTGGGTATCGCAGGAGAGGTACTTTTGCAAGTAC
TGCAAAGTGTGGCTTTCCAACCATCAAGCGGTGAGATTATGCTTGTCTAT
ACATTGGAGTACACAAGTATTGATGCGCGTCGGGTGTTGCTACAGGTAAC
GAGGTGCTGTGGACCGTTGCACTGCTGTAGTCATGATGTCTTCATCTAAA
GAGAGATGCCAGTTACGGAGCAGGTACAGTAGATGATACCTAAAGTTCCC
GCTATGGCATCATTTTTGAAATCATCGTCGTACTGCTTGGACAGCCTACA
GAGCTGGTTGCTCCTTCATTTCTCGGCCGACGTTTGCGCCAGAAACATCA
ACTAAATACTTCGTATGCATACTGATCATGGGTAGGCTCACGGCGTAGCA
GCGGTGTCTCAATGATGGAGAACAGACGGTTAGTTGTCAAGACCATTTAG
TGCAGTGCCGCCGTTTTTCTTCGTTGTTTCTGAAGCGCTGAACCCAACAT
CTTACACCGCAGAGGGTTGGTCTGATTTACATGTGAATCCGCGGCCAGTC
TACACGTCTACACGCGAAGGAAGGGGAGGGGGATGGAATTACCGACAGCT
TGAAATGTGCATACGGCAACGGACGGCAGCCTCCCCGGAATGGAGTGTTT
TGAAGTCGATCGGCAGCGGGGACTCCCTGCTGTAGCATAGCCGCCTACCA
ATGTATCAACAAGTCTTGACGTCTAGTACAGGTACCAGTGAGTCTTGCGT
CACATTCCGAACACACGAAGTATTTCCCTGAAGAATCACAGGGCCGTATA
GTTGCTGTACGGACTGTTATTGTACCATTCGGCCCGAGCGCCCAAACCGG
CACAGCAAGACGGCATTTTCCCTCAGATTGGGCCGCCCCCCCGTGTTGCC
TGCTACTGCTACTTGTTTGGGGCAGCACCAGTATATGCTGATAACATCGC
GCTACCTGCGGATTCCATTGATTTACCACCACCACATTTTTGGCGGATTT
TGTGGTGCTGTTTGACGCGTCGAATGAAGCGGGCACACATGATGACCAGG
ATTCTGAGACAACTCGTGTTAAACTTAAGTAGCGGAATATCGTTGGAGTG
TTGTGCGGATGAGAGATTTTGTAGTGTTCGGCGGTGCGATGTGTGACGGA
GCATGGGGGGGGGCAACGCGGCGAGCGGCTGCCCGGGCGGGTTCCCACCG
ATGCTTTCGCCGCATACCACGGGCGGTGCTGCCATCCTTTCCCCATCCCA
CGACACCAAGTATTGTTTTTCTCGACGCCTGTGCATATCGTTTCGGGAAC
CCACGGAATGCGAGGGAACTGCTAGAAGAAGATTTTCGGCTCACCGGGAG
AATGGGTCCGCGAAAATGGCAACAACAACAACAACAATGCAACAACCAAG
AGCTACATCATTTTTTGTCAACACAATGCGCGCACACCCTTTTTTTTTTC
CTTGTCTGCGGCCGGTTTTTTCAGAGCATTCGCAATCATGACCAAGGCAA
GAAGCACGTCGAGATCGTCGCCGAGTTCTTCCGCAAGAAGCGCGAGGACA
AGCTCAAGGGTGCGCAGAGCGAGTCGGACCTGAAACGGCAGATGGAGAGG
ATCGAAAAGGTGAGGACGAGACGGGGGAAAAGAAATAGTGGCCTCACGGT
GTGTGGGGGGAGGGTTCAGCAGCGGACGAAAGTTAAAAGTTTTGTGTTTC
CACTAGCGGCTGTTGCTTGTTTTTTTCGTTCGCCATATGTGACCATATGC
GTTCCCATATAATGCGGTGGTGGTGGGGCGGGGAAAGGTAGCCCTTGCTT
GAGTACCTATTTGGCGACGCCAAGTGGGCCAGCAGCTGCTTGATCTCCTG
CCGCGCGCCTCCGCAGCGTCCCCTCCCGCAATGAGTTGCTCGTCGCGTGC
CAATCATCATCGTCGTCGGAATCCGGAAACCCTATCTTATGTTTTCGGAT
CACTCTGCGGGCGGCGCCTGTGCTTGCATAGAAACGCCTCCCTGCTCCGC
GAAAGAGACCCCCGAGTTCTTCGCCCCGGCTTCGAGCTATGCGGTCGTGC
ATGGCAACCAACAAACCTACGGCCATGCTAAAGCTACCCAGCGTACGGCC
TCGCCCCACCCACCGCCCTCGTCGTGTGCCATCATGTTTTTTCTCCGCAG
GCGGCGCAAAGAGCGCACGAGAAAGACCTCGCCATGTTCGGCGGCGCCGG
GGCCGGATCAGGATCGGGCGCAGGATCCGCGGGACCCCCACCCCCCCCGC
CCCCCCCGGGAGGCCCGTCGCCGCCCCCCCCGCCTCCGCCACCAGGAGCC
CCGCCGCCGCCGCCCCCCCGGCCGAGTGGCGACGAAGCGGCCGACCGCCC
TCCGCCCCCGCCCCCCCCCGGCTCGCCTCCCGGCCGAAGTAGTAGTCGGG
GCGGAGATACACCGCCGCCGCCGCCGCCGCCGCCGCCAAGGCCTGCATGT
GGAAACCCGTCGGTTCGGGCGGGTGCAGTAAAGGGGGAAGAGGGGGAAGA
AGGGCGGGAGGGGAGCGACGGGGGCGGCGGAGGAGGAACTGCCTGGGACG
GGGTTTTGGAGGAGGGGGGAGAGTGGTATCTGGACGGACAGGTGCGGTGG
GGGAAACGTGATAAATGACATAGTACCGTCAATGTTGTTTTTTGTTGTGG
ATCGAAGGGGGTCGGGGCATCCGACCCCGCAGTTTTTGCTGGTTTTGGGT
TATGGTCTGAAGACGGAGGGCAGTTTTGGGCTACCGTCGTCTTCTGGTCG
TCGTGCTTGGTTGAATCGCGGGTACGTATTGTACGACCTCCGTATAGGTT
TGAAGAACTGTTTGGTGTGCACATTAGTAGTTGCATCCGTCCGAGTGCAT
AGTCGAGACCCGTGCGTTCGTTCGCAACGTTGAGGTGGGGAGGCGGCGAC
GGGGGAGAACGAAGAACGTGTCTGTGGTGACATTCGTGGTTGATTGGACC
CTGCCCTACGGATGCTACAGGTGAACTCGTATACTTGTGGTCGCAGTCCT
CCTTGCGTGGGCCATGTCTTTGCTCCCGTCTTCTCCTTCGTGACGGATTA
CCGTCTGTGGGACGCAAAACATCGCGACCCCTCCCTCCTCCTCTTGCGTC
TTCACGGCAGTCCCTCTCGTCATCCCATACAGGCACATACAGTCGACCCC
GCTTTAAGGACACACCGCGTTTTTTTTTTTTGGAGTGTCCTTAACGCGGG
GAAGTGTCCTTAAGATTCCGGGGCCACTAACTCACCATCCCCGGGGCCAA
TGGAGGTGTAACATGTGTCAAAATACGCGCATTTGAAGCAGGAATGCGAC
CACGAAACTACTGCTGTGCTGCTGTGTTGCTTTAAACTACGACAACACGC
GTTGGAAGGCCGCCACACTACGGCTGTAGTACTCCAATACTGCAGCACGA
TCGATTGTAATGTGCGGCAGTGCGCTGGTGTTGCTGCAGGCTTTTATTAT
TGTCAAGGCGTCATCCTCACGGTGAACATCATGCCCGAGATATCGCGAAC
ACACCTGAGACACATCAATTCGTTGGAACTAGCTCTGATGCGATACACGC
AAGTTACCTGCCACATGGGGACCAAACAAACCCAGTCGACCCCTTAGAAG
GATACTAGGAAACGGTCGGTACAACATATATATGTAAAAAAAATCGGGCA
AATACACAGAAAATAGGACACCGTTCTTCCCCAAAGGAAAAAACACAAAA
AAAAAACAAAATTTAAAATTTAACTCCACGAGAAAGGCAAAAAATCCCAA
ACCCCTGACACGAGAGTAGACTTTGACTGGCACGTGGGTTCGCCACATGG
CTTCAAGCCGGCAGCTGACGACCCGCCAGCAGATGGGAGGAATCTCTCCA
TACCCACACGCAGTAGTGCGGGCTGCAGCAGACCGCTGTCGATGCTATAT
GTACTGCTGTACAGGTGTGCTGCCCCGCAAAAAAATGGGGGGGCCGCGTA
GTGGAAAAGGTACCCCCCCCTATTATTGTATATCTGCGGGGCACCATGTT
CTGGGAAAAAAATGTATCCTTATAGCGGGGAGTTTCCTTAAGATTAGTGT
CCTTAAAGCGGGGACGACTGTAACCACATTTTGTTTTTGCTCGCAAGGTC
TAAAACCCGGGCCCGTATGTGCTGCCTATCTGTTTCGTGGCGGAATTCAT
ACCGCGACCCGCGCAGACGCATCGAGACAAGCTTGCGGTTGACGCCGCCT
GCCAGTTCTTCCTGACTTCTGAGGGCCTGTGGGTCGATGCGGTCGTGCTA
GCGGTAGCCGACTCAGAACATCCACCGCATGACGCTACCGCTGCTGGTGG
TTCCTCAGCTGGATCCACGGCTACCACTCGGCGGTGAGAGCAATGGAGAG
ATTTTTTTTTTTTTTTCTCCCTGCTAGCAACACCAGGGTCCCGCGCTCTC
GTGTCAGCTTCCCCCCAAACAATCTACATTGTCGACACGATGCTTTTGTC
CCTCTCCGTAAAGACTATTTATCTCGGGAAGAGTATTAGTGTAGGTTTAT
CTCCTGACAATCCATCGGGAAAACTGCAAGTGTTGCCTGCGTCTCTGTCC
CTGATAGACGATCAGGAAAATAAGGTGTGTTTCACATTGTCGTCAATTTC
ATATTCAACTCTCACGATCGAGATAGATTTCCTTTTAGCGTTACTCTTTG
CGATGCGTAAACATGCACATATGCGTACGGCTGTTTGCACGTATGGTTGT
GTGTGTGTGAGAAAGGGGTGGCGGTGAGTGGCGAGGAGAGGCATCAGCGC
CGACGGTTTCGCTTTCTTTTTCGAAATTTTCGGGCTTCACTTTGTAGGGC
GGCGTTTTGGCCCCCCTCTGGAAACGAAAGTGTTGGTGCCAAGTTGGCTT
TTCGATCTGCAGGATAGGACTTTTCTGCAGCACCATACACATTGTTTCGC
CTCACAAGAGGAGGTTGTTGACATGGTGTCCAGTTAAGTCATGCCCACCT
GTACCGCCCCCCTGTGATGCATTGGTGAATGTGCCTTTGTTGGCCATGTA
CAGGGAGTTGTCACCGCCCAGCTGTCCCTTGTTCTGGCATGCCATACCTG
GTGTGCTTGGCCATCCCTCCATGCAATTCTCCGGATACCTCACGGCGCGC
TTGGTGATGTGCTCGCTTGGTCCGGTGAAAACCCGGCGTGCTCCGTCCGA
CTTTGTACGACTGCGAAGTCTAACGACTTTGGCATGCATGCACGGCTATG
AGTACACCCCGCTCCGGCCCGCACCACCCAACGCCTTCCTCCGTACAGTA
TAAGGCATGCCCTCGCCGTGTTCTTCACTCTCCCCTCTCACACATCTTGC
CCACCCTCCCCTACCCCACGAGGGCACACTTCAGGTTAGACCTGGCCTAC
TTTGAGGCAGGTGCTGAGAAGGAGACGGTTTTGAGAGGGGTGGAGGCGGC
GGCGGTGCGTCTTCCGGCCGGGGAGGGGGGGGCGTGGCCCCCCCCTCAGG
AGATGCCTCCTCCACCACCACCGGACGAGAACACCGGGCTGGGGGGATGG
CAGACGGTGAGGAAGGACTACGGGGGTGTTGCCATTCACCCTTTATACAG
TAATAAATAAATGGAACCGGATAGCAGTACATCGATCCTAGGGTAAGGGT
AGGGTATTTTTCCTGCGACGAAGGATGGGAGGAGGTCGACTTCCGCTGCC
ACATGGTATCGAGAGTATGAATCTTGTGTTTGTCAGGTGTTGGTGTTGTT
GTTGATGATGACGTACTTTTCGTGGGTTGAACAGCAGTGGTCCTGTGCCG
TTGTGCTGCTCAATATATTTCACTCGCACACCACCAACCACTACCACCGC
CCCCAACGCATTTCAATGCAAAGCATACCAACGAACACCCCGGGCGAGAG
ATCTCCAGGCGATGCCCCGCGCCTTGGCCGCAAACACCCGCCGCGGTCTT
CTGAATGAGATCGAGACGTCCACCCCTCCTCATTTTTTTGCTTGGCGGCG
ACAAACAAAACTTGCTCGTTGCACGTATGCCTCCAGGTAAGCGTACGCAT
GGTGGACGTGGCTGCGGAGGCGGAGGCCAGGCGCGTAAAGAAGGAGGTCA
AGAAGGCGAAGAAGCAAAAACGGGAGGAAAAAACAGAGCGAGAGAAGGTG
GGCGTGCTTACGGGGCTCGGCAGCAAGTGCATGCATGCGGACAGAGTCTG
AGTCCCTCGGAACCTTTGTACTATCTGGTCCCTTGACGCTTTGTGCCCTC
TGTGATCCTTTCGAAGCCGTGTACAGCCCTCTGTGGAAGGAAGGTCGGTG
GGTTCATTGGCTTGGCGTGGTGCGGAGCAGCTCGACTCTTACTCTCTCAC
CGATCGCCTCGATAATTGAGACCTCCCGTGCGGTGTGGGCTTTTGGTCGC
CCCCGCGGACGCTGTGACGACGTAGTTGCAACCGCCCGGTGGTCGGGGTT
TGTGTGCAGAGACGTCGTAGCCCCCCCTCCCCACGGTCGCCACTGACGAA
ATCTCGTCCGTTCTAGCCTGGCAGCTGTGTTCCGGTCACACCACGCGCGA
AAAGGTGCAACGATAAAACGCCACAGCCACGACAATAATCTACAACAGTA
TCGTCGTGACCCATCCCATTGCCCGCCGCCGCCGCCGCCGCCGGCCGCTG
ATTTGCCTGGTGACGATGATTTTTTTCCCACAGATGTTGGTGGAAGCGAT
GGACGCGGACGATGCCATGGGGTCCTACGACCCGTGGGGCACCGGCAAGT
ACAAGGGTTTCGAGGTAGCGAAGGATGTTCCCCGCGGCCCCGAGGAGGAG
GCGGCGGGCGCCGGGGGTGGGGAGGGCGGTGGACCGGCGGTGTCGTTCAA
GAAGAGAAAGGGTCCCGGCAACAAGGGCAAATTCAGGAAGAAGGCCAGGG
ATGATGATGAGTGAAACGTTGGCGGAGGAAGGGGTCTGCCCCCCCCCCAG
GGGGTGTGCGGCGTGTGTTCGCCGGGACCCGGAGGCGAGTGTTGACGGAA
ATATGAGCGACATTGCAGTATGAAAGAAAGCAAGAAGTAGTGGGGCGCGT
TTGCGGTGTGCACTGACTGCGTGTGTGAAGGTGGCAGTGTCATGACGATT
GCTTTCTTCTCCTGGCGGATCGTGATAGATCGAGACTTGGGGGGCCGATT
TCTGCCCAGCCAGCTCGTTTTCACTTTTATTGCCCGCGTATCGAGCTGGT
GTATTAGAGAAGGTTGGAACCAAGCCCCCGTTAAACAACAAGGCCGTAAA
ATCGCTCGTCGTGTGCTGTCACCCTGGGTGATGGACGGCATCCAATCACA
ACTTGTCCCACGTTTTGATGGATTCCGACTGGGGTTACAATACAACTCAC
GAGATGGCGGCGTTCGTCGACCGAGCCTGCGAGAAGCGCTTTCGAGGACC
GAGCTTTCCGTGATGTTTTATTCCAACGACCTTTACAAGTCACTGATTCA
CCTGTCCATAGACCCTTCCAGAGTGAAGTAGCCGTGATCGCTCCGAAAGC
TCCCGTGCGAAGCACAAGTGAGGTTGCTAAGATCAGAGTTGGGATGGAAA
ACAAGTGAAACCGTCCGTCGAGATTGTGGCCACACGTAACGAAGACCTCA
GGTCAACGTTCACTGGAGACGCCAACAAACGCAAGTTTTGTGTACAACTC
TATTGTAGAGAAAATGTTTGGTGGAGTCCACACGCCTCGGGGGGAGAAGT
TTTAGTCTTTAAGGTGTTTCCAATCTCTAGCATGAGAAAAGTGACGGGAA
GTGCGATCTGGCCTCTTGAGAATCTCCGCAATCGCCCACGCACTCTTCAC
AGAGGTCGGGATGAAACACACATG

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig99:237295..245068-

>mRNA_E-siliculosus-1a_M_contig99.17764.1 ID=mRNA_E-siliculosus-1a_M_contig99.17764.1|Name=mRNA_E-siliculosus-1a_M_contig99.17764.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2430bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:237295..245068- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCATCATACTGGGTATCGCAGGAGAGGTACTTTTGCAAGTACTGCAA
AGTGTGGCTTTCCAACCATCAAGCGATGGCATCATACTGGGTATCGCAGG
AGAGGTACTTTTGCAAGTACTGCAAAGTGTGGCTTTCCAACCATCAAGCG
AGCATTCGCAATCATGACCAAGGCAAGAAGCACGTCGAGATCGTCGCCGA
GTTCTTCCGCAAGAAGCGCGAGGACAAGCTCAAGGGTGCGCAGAGCGAGT
CGGACCTGAAACGGCAGATGGAGAGGATCGAAAAGAGCATTCGCAATCAT
GACCAAGGCAAGAAGCACGTCGAGATCGTCGCCGAGTTCTTCCGCAAGAA
GCGCGAGGACAAGCTCAAGGGTGCGCAGAGCGAGTCGGACCTGAAACGGC
AGATGGAGAGGATCGAAAAGGCGGCGCAAAGAGCGCACGAGAAAGACCTC
GCCATGTTCGGCGGCGCCGGGGCCGGATCAGGATCGGGCGCAGGATCCGC
GGGACCCCCACCCCCCCCGCCCCCCCCGGGAGGCCCGCGGCGCAAAGAGC
GCACGAGAAAGACCTCGCCATGTTCGGCGGCGCCGGGGCCGGATCAGGAT
CGGGCGCAGGATCCGCGGGACCCCCACCCCCCCCGCCCCCCCCGGGAGGC
CCTCGGGGCGGAGATACACCGCCGCCGCCGCCGCCGCCGCCGCCAAGGCC
TGCATGTGGAAACCCGTCGGTTCGGGCGGGTGCAGTAAAGGGGGAAGAGG
GGGAAGAAGGGCGGGAGGGGAGCGACGGGGGCGGCGGAGGAGGAACTGCC
TGGGACGGGGTTTTGGAGGAGGGGGGAGAGTGGTATCTGGACGGACAGTC
GGGGCGGAGATACACCGCCGCCGCCGCCGCCGCCGCCGCCAAGGCCTGCA
TGTGGAAACCCGTCGGTTCGGGCGGGTGCAGTAAAGGGGGAAGAGGGGGA
AGAAGGGCGGGAGGGGAGCGACGGGGGCGGCGGAGGAGGAACTGCCTGGG
ACGGGGTTTTGGAGGAGGGGGGAGAGTGGTATCTGGACGGACAGACGCAT
CGAGACAAGCTTGCGGTTGACGCCGCCTGCCAGTTCTTCCTGACTTCTGA
GGGCCTGTGGGTCGATGCGGTCGTGCTAGCGGTAGCCGACTCAGAACATC
CACCGCATGACGCTACCGCTGCTGGTGGTTCCTCAGCTGGATCCACGGCT
ACCACTCGGCGACGCATCGAGACAAGCTTGCGGTTGACGCCGCCTGCCAG
TTCTTCCTGACTTCTGAGGGCCTGTGGGTCGATGCGGTCGTGCTAGCGGT
AGCCGACTCAGAACATCCACCGCATGACGCTACCGCTGCTGGTGGTTCCT
CAGCTGGATCCACGGCTACCACTCGGCGGGCACACTTCAGGTTAGACCTG
GCCTACTTTGAGGCAGGTGCTGAGAAGGAGACGGTTTTGAGAGGGGTGGA
GGCGGCGGCGGTGCGTCTTCCGGCCGGGGAGGGGGGGGCGTGGCCCCCCC
CTCAGGAGATGCCTCCTCCACCACCACCGGACGAGAACACCGGGCTGGGG
GGATGGCAGACGGGCACACTTCAGGTTAGACCTGGCCTACTTTGAGGCAG
GTGCTGAGAAGGAGACGGTTTTGAGAGGGGTGGAGGCGGCGGCGGTGCGT
CTTCCGGCCGGGGAGGGGGGGGCGTGGCCCCCCCCTCAGGAGATGCCTCC
TCCACCACCACCGGACGAGAACACCGGGCTGGGGGGATGGCAGACGGTAA
GCGTACGCATGGTGGACGTGGCTGCGGAGGCGGAGGCCAGGCGCGTAAAG
AAGGAGGTCAAGAAGGCGAAGAAGCAAAAACGGGAGGAAAAAACAGAGCG
AGAGAAGGTAAGCGTACGCATGGTGGACGTGGCTGCGGAGGCGGAGGCCA
GGCGCGTAAAGAAGGAGGTCAAGAAGGCGAAGAAGCAAAAACGGGAGGAA
AAAACAGAGCGAGAGAAGATGTTGGTGGAAGCGATGGACGCGGACGATGC
CATGGGGTCCTACGACCCGTGGGGCACCGGCAAGTACAAGGGTTTCGAGG
TAGCGAAGGATGTTCCCCGCGGCCCCGAGGAGGAGGCGGCGGGCGCCGGG
GGTGGGGAGGGCGGTGGACCGGCGGTGTCGTTCAAGAAGAGAAAGGGTCC
CGGCAACAAGGGCAAATTCAGGAAGAAGGCCAGGGATGATGATGAGTGAA
TGTTGGTGGAAGCGATGGACGCGGACGATGCCATGGGGTCCTACGACCCG
TGGGGCACCGGCAAGTACAAGGGTTTCGAGGTAGCGAAGGATGTTCCCCG
CGGCCCCGAGGAGGAGGCGGCGGGCGCCGGGGGTGGGGAGGGCGGTGGAC
CGGCGGTGTCGTTCAAGAAGAGAAAGGGTCCCGGCAACAAGGGCAAATTC
AGGAAGAAGGCCAGGGATGATGATGAGTGA