Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 0 |
| Cds size | 138 |
| Model size | 140 |
| Exons | 2 |
| Hectar predicted targeting category | no signal peptide or anchor |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936569.3832488-CDS-E-siliculosus-1a_M_contig99:606999..607085 | 1622936569.3832488-CDS-E-siliculosus-1a_M_contig99:606999..607085 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig99 607000..607085 + |
| 1696251135.637063-CDS-E-siliculosus-1a_M_contig99:606999..607085 | 1696251135.637063-CDS-E-siliculosus-1a_M_contig99:606999..607085 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig99 607000..607085 + |
| 1622936569.402783-CDS-E-siliculosus-1a_M_contig99:607560..607612 | 1622936569.402783-CDS-E-siliculosus-1a_M_contig99:607560..607612 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig99 607561..607612 + |
| 1696251135.6475065-CDS-E-siliculosus-1a_M_contig99:607560..607612 | 1696251135.6475065-CDS-E-siliculosus-1a_M_contig99:607560..607612 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig99 607561..607612 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig99.17795.1 >prot_E-siliculosus-1a_M_contig99.17795.1 ID=prot_E-siliculosus-1a_M_contig99.17795.1|Name=mRNA_E-siliculosus-1a_M_contig99.17795.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=46bp
TPRTSSETTLTGLGPPTLGTYPGKRKVGRPTLMEGLHFVWNPRDQS back to topmRNA from alignment at E-siliculosus-1a_M_contig99:607000..607613+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig99.17795.1 ID=mRNA_E-siliculosus-1a_M_contig99.17795.1|Name=mRNA_E-siliculosus-1a_M_contig99.17795.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=614bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:607000..607613+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ACGCCAAGAACTTCGTCTGAGACCACCCTTACCGGCCTCGGACCACCCAC
ACTCGGAACGTACCCCGGAAAACGGAAGGTAGGCAGGTATGTATGTCAAG
AGCCGGAGAGTACAGATTTTGGTAGATGGCACCGGGTGCGATCGGTTTCT
TGTCTTGTTCTGTTCTGTGAAGAGGCCACGCTGTCTTCGGTCCCTCTGAA
CCCAGTGCTTTCGGGCTCTGCACTCCCAGTCAGTGCTCCAATCTGTCAGT
GTTCCCGTTTGGCGCAGCATTCTGCACCTCGCGCGCTCACTCCCTCTTTG
TTTGCACTAATCGATCAGCAGTCTCATCCTCGCATGCTCCGCGCAACCAA
CAATTATTCGCGCTGTCATCCACGTGATCATTCATCCACTAGTTTCCGCG
AGCAGATATTTATACCCCATCCGCGTTCTGTGTCCCTCTCTTTCCGTGTC
AATTTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTACTATCTCTCTCTCTCTACTATCTTTCTCTCTCATAATTCCT
GCTCAACTCAGGCCAACTCTTATGGAAGGTCTGCATTTTGTCTGGAACCC
ACGGGACCAGTCAG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig99:607000..607613+ >mRNA_E-siliculosus-1a_M_contig99.17795.1 ID=mRNA_E-siliculosus-1a_M_contig99.17795.1|Name=mRNA_E-siliculosus-1a_M_contig99.17795.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=276bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:607000..607613+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ACGCCAAGAACTTCGTCTGAGACCACCCTTACCGGCCTCGGACCACCCAC
ACTCGGAACGTACCCCGGAAAACGGAAGGTAGGCAGACGCCAAGAACTTC
GTCTGAGACCACCCTTACCGGCCTCGGACCACCCACACTCGGAACGTACC
CCGGAAAACGGAAGGTAGGCAGGCCAACTCTTATGGAAGGTCTGCATTTT
GTCTGGAACCCACGGGACCAGTCAGCCAACTCTTATGGAAGGTCTGCATT
TTGTCTGGAACCCACGGGACCAGTCA back to top
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