prot_E-siliculosus-1a_M_contig98.17735.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig98.17735.1
Unique Nameprot_E-siliculosus-1a_M_contig98.17735.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length121
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig98.17735.1 vs. uniprot
Match: D1J7B8_ECTSI (ATP-dependent Clp protease ATP-binding subunit clpA homolog n=9 Tax=Ectocarpales TaxID=2877 RepID=D1J7B8_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 4.340e-61
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
Query:    1 MMELLVEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKNENDDEDPVDILVDVDLNKVKVSISKTIIKEEVKPAQEXXXXXEKRSYKIIVPRLEKIRKEEEAKAKLDLDKLLQQKQESN 120
            MMELLVEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKNENDDEDPVDILVDVDLNKVKVSISKTIIKEEVKPAQEXXXXXEKRSYKIIVPRLEKIRKEEEAKAKLDLDKLLQQKQESN
Sbjct:  784 MMELLVEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKNENDDEDPVDILVDVDLNKVKVSISKTIIKEEVKPAQEXXXXXEKRSYKIIVPRLEKIRKEEEAKAKLDLDKLLQQKQESN 903          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17735.1 vs. uniprot
Match: A0A2I4Q2E7_9PHAE (ATP-dependent clp protease ATP-binding subunit n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2E7_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 5.140e-28
Identity = 62/105 (59.05%), Postives = 81/105 (77.14%), Query Frame = 0
Query:    1 MMELLVEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKNENDDE---------DPVDILVDVDLNKVKVSISKTIIKEEVKPAQEXXXXXEKRSYKIIVPRLEK 96
            M+ELL+EEGFNP YGARPLRRALVKLVEDKVSLEYLRY+N++D+E         + VDILVDV+ N+VKVSI+KT+ KE+ +  ++     E++ YKI+VP  +K
Sbjct:  781 MLELLIEEGFNPIYGARPLRRALVKLVEDKVSLEYLRYQNDHDEESTQKDQQENEAVDILVDVEFNRVKVSITKTLKKEQSEKPKDETPPQERKKYKIVVPSRQK 885          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17735.1 vs. uniprot
Match: A0A8F0F755_9PHAE (ATP-dependent clp protease ATP-binding subunit n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F755_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 3.970e-26
Identity = 67/96 (69.79%), Postives = 76/96 (79.17%), Query Frame = 0
Query:    1 MMELLVEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKNEND----DEDPVDILVDVDLNKVKVSISKTIIKEEVKPAQEXXXXXEKRSYKIIVP 92
            MMELL++EGFNP YGARPLRRALVKLVEDKVS+EYLRYKN++D    +ED VDILVDVDLNKVKVSI KT  K E      XXXXX    +KI++P
Sbjct:  779 MMELLIDEGFNPIYGARPLRRALVKLVEDKVSIEYLRYKNDHDGEDEEEDAVDILVDVDLNKVKVSIKKTEKKPEEXXXXXXXXXXXXXKFKIVLP 874          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17735.1 vs. uniprot
Match: A0A8E6D4W2_9PHAE (Clp protease ATP binding subunit n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D4W2_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 2.250e-24
Identity = 58/101 (57.43%), Postives = 79/101 (78.22%), Query Frame = 0
Query:    1 MMELLVEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKNENDDEDP---VDILVDVD-LNKVKVSISKTIIKEEVKPAQEXXXXXEKRSYKIIVPRLEKI 97
            MME+L+EEGFNPTYGARPLRRALVKLVEDKVSLEYLR+  + D+ED    V+ILVDV+ L+KV+VSI + II+E+    Q+     E++ YK+++P+  ++
Sbjct:  780 MMEVLIEEGFNPTYGARPLRRALVKLVEDKVSLEYLRFTKDKDNEDQNPAVEILVDVNSLDKVEVSIKEQIIEEKKVEEQKPPVVKERKKYKVVLPKYRRL 880          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17735.1 vs. uniprot
Match: A0A0R6M4R6_UNDPI (ATP-dependent clp protease ATP-binding subunit n=63 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6M4R6_UNDPI)

HSP 1 Score: 85.1 bits (209), Expect = 8.020e-17
Identity = 39/44 (88.64%), Postives = 43/44 (97.73%), Query Frame = 0
Query:    1 MMELLVEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKNENDD 44
            MMELL+EEGFNPTYGARPLRRA+VKLVEDKVSLEYLRYK ++DD
Sbjct:  779 MMELLIEEGFNPTYGARPLRRAIVKLVEDKVSLEYLRYKKDHDD 822          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17735.1 vs. uniprot
Match: A0A2D8WDT9_9FLAO (ATP-dependent Clp protease ATP-binding subunit ClpC (Fragment) n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2D8WDT9_9FLAO)

HSP 1 Score: 59.3 bits (142), Expect = 8.240e-8
Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    3 ELLVEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKNENDDEDPVDILVDVDLNKVKVSIS 64
            E LVEEG+NP+YGARPLRRA+++L+ED ++ E L  + +N D      LVD+D NK KVS++
Sbjct:  460 ERLVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGRIKNGDR----ALVDIDENK-KVSVN 516          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17735.1 vs. uniprot
Match: CLPC_CYACA (ATP-dependent Clp protease ATP-binding subunit ClpA homolog n=1 Tax=Cyanidium caldarium TaxID=2771 RepID=CLPC_CYACA)

HSP 1 Score: 58.2 bits (139), Expect = 2.200e-7
Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    4 LLVEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKNENDDEDPVDILVDVDLNK 58
            LL+EEG+NP+YGARPLRRALV+L+ED ++ E L  K +  D    + ++DVD NK
Sbjct:  787 LLIEEGYNPSYGARPLRRALVRLLEDSLAEEVLSGKIKEGD----NAMIDVDENK 837          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17735.1 vs. uniprot
Match: A0A0A2BQH6_9CYAN (ATP-dependent Clp protease n=2 Tax=Prochlorococcus TaxID=1218 RepID=A0A0A2BQH6_9CYAN)

HSP 1 Score: 57.8 bits (138), Expect = 2.990e-7
Identity = 34/73 (46.58%), Postives = 49/73 (67.12%), Query Frame = 0
Query:    3 ELLVEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKNENDDEDPVDILVDVDLNKVKVSISKTIIKEEVKPA 75
            E LVEEG+NP+YGARPLRRA+++L+ED ++ E+L  K ++ D   VDI  D + N V   I +  IK ++  A
Sbjct:  767 ERLVEEGYNPSYGARPLRRAVMRLLEDSLAEEFLSGKIKDGDYAEVDI--DENKNVVVKHIDENTIKPQLATA 837          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17735.1 vs. uniprot
Match: A0A7S6ZPD9_9STRA (ClpC n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPD9_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 4.100e-7
Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    1 MMELLVEEGFNPTYGARPLRRALVKLVEDKVSLEYL 36
            M   L++EGFNP YGARPLRRA+V+L+EDKV+ +YL
Sbjct:  783 MRARLIDEGFNPVYGARPLRRAVVRLIEDKVAAKYL 818          
BLAST of mRNA_E-siliculosus-1a_M_contig98.17735.1 vs. uniprot
Match: A2BX75_PROM5 (ClpC n=46 Tax=root TaxID=1 RepID=A2BX75_PROM5)

HSP 1 Score: 57.0 bits (136), Expect = 5.570e-7
Identity = 33/63 (52.38%), Postives = 46/63 (73.02%), Query Frame = 0
Query:    3 ELLVEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKNENDDEDPVDILVDVDLNK-VKVSIS 64
            E LVEEG+NP YGARPLRRA+++L+ED ++ E L  + ++ D+     LVD+D NK V V+IS
Sbjct:  772 ERLVEEGYNPAYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDK----ALVDIDENKKVTVNIS 830          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig98.17735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J7B8_ECTSI4.340e-61100.00ATP-dependent Clp protease ATP-binding subunit clp... [more]
A0A2I4Q2E7_9PHAE5.140e-2859.05ATP-dependent clp protease ATP-binding subunit n=1... [more]
A0A8F0F755_9PHAE3.970e-2669.79ATP-dependent clp protease ATP-binding subunit n=1... [more]
A0A8E6D4W2_9PHAE2.250e-2457.43Clp protease ATP binding subunit n=1 Tax=Ishige ok... [more]
A0A0R6M4R6_UNDPI8.020e-1788.64ATP-dependent clp protease ATP-binding subunit n=6... [more]
A0A2D8WDT9_9FLAO8.240e-853.23ATP-dependent Clp protease ATP-binding subunit Clp... [more]
CLPC_CYACA2.200e-754.55ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A0A2BQH6_9CYAN2.990e-746.58ATP-dependent Clp protease n=2 Tax=Prochlorococcus... [more]
A0A7S6ZPD9_9STRA4.100e-766.67ClpC n=1 Tax=Schizocladia ischiensis TaxID=196139 ... [more]
A2BX75_PROM55.570e-752.38ClpC n=46 Tax=root TaxID=1 RepID=A2BX75_PROM5[more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019489Clp ATPase, C-terminalPFAMPF10431ClpB_D2-smallcoord: 2..41
e-value: 8.0E-9
score: 35.4
NoneNo IPR availableGENE3D1.10.8.60coord: 1..76
e-value: 1.8E-10
score: 42.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig98contigE-siliculosus-1a_M_contig98:650717..651079 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig98.17735.1mRNA_E-siliculosus-1a_M_contig98.17735.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig98 650691..651115 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig98.17735.1 ID=prot_E-siliculosus-1a_M_contig98.17735.1|Name=mRNA_E-siliculosus-1a_M_contig98.17735.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=121bp
MMELLVEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKNENDDEDPVDI
LVDVDLNKVKVSISKTIIKEEVKPAQEIKPAQEKRSYKIIVPRLEKIRKE
EEAKAKLDLDKLLQQKQESN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019489Clp_ATPase_C