prot_E-siliculosus-1a_M_contig97.17668.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig97.17668.1
Unique Nameprot_E-siliculosus-1a_M_contig97.17668.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length114
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match: D7G033_ECTSI (Ribosomal protein L35 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G033_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 5.750e-77
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0
Query:    1 MRTSPRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 113
            MRTSPRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI
Sbjct:   44 MRTSPRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 156          
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match: A0A836CIX4_9STRA (Ribosomal protein L35Ae-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIX4_9STRA)

HSP 1 Score: 190 bits (482), Expect = 1.480e-60
Identity = 91/111 (81.98%), Postives = 102/111 (91.89%), Query Frame = 0
Query:    3 TSPRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 113
            +SPR  QPVRLYVKGV+LG+KRGLRN Y+HTSLIKIQGVED  A+ FYLGKRIAYIYKAK LKN +K+RV+WG+VCR HGTNGV+RAKFRTNLPPKAIGAPVRVMLYPS+I
Sbjct:   12 SSPR--QPVRLYVKGVVLGYKRGLRNQYNHTSLIKIQGVEDTAATEFYLGKRIAYIYKAKALKNNSKFRVIWGRVCRAHGTNGVIRAKFRTNLPPKAIGAPVRVMLYPSRI 120          
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match: A0A7S2SN13_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN13_9STRA)

HSP 1 Score: 177 bits (448), Expect = 2.180e-55
Identity = 84/107 (78.50%), Postives = 93/107 (86.92%), Query Frame = 0
Query:    7 SGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 113
            S QPVRLYVKGV+LG+KRGLRN Y HTSLIKIQGV+D +  +FYLGKR+AYIYKA    NG+KYRV+WGKVCR HGT GVVR KFRTNLPPKAIG PVRVMLYPS+I
Sbjct:   13 SSQPVRLYVKGVVLGYKRGLRNQYCHTSLIKIQGVDDCKDVDFYLGKRVAYIYKASNKVNGSKYRVIWGKVCRAHGTTGVVRCKFRTNLPPKAIGGPVRVMLYPSRI 119          
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match: A0A4D9CXD4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXD4_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.430e-54
Identity = 83/107 (77.57%), Postives = 94/107 (87.85%), Query Frame = 0
Query:    7 SGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 113
            S +PVRLYVKGV+LG+KRGLR   +HTSLIKI G+++K++ +FYLGKRIAYIYKAKTLKN TKYR +WGKV R HGTNGVVRAKFR NLPPKAIG PVRVMLYPS I
Sbjct:    6 SSEPVRLYVKGVVLGYKRGLRQQTNHTSLIKIDGLDEKKSVDFYLGKRIAYIYKAKTLKNNTKYRAIWGKVTRAHGTNGVVRAKFRRNLPPKAIGGPVRVMLYPSTI 112          
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match: A0A7S1XMC8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMC8_9STRA)

HSP 1 Score: 171 bits (433), Expect = 4.490e-53
Identity = 83/106 (78.30%), Postives = 93/106 (87.74%), Query Frame = 0
Query:    9 QPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTL-KNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 113
            QPVRLY KGV+LG+KRGLRN  +HTSLIKIQGVEDK+ + FYLGKRIAYIYKA T  K G+K+RV+WGKVCR HG+NGVVRAKFR NLPP  IGAPVRVMLYPS+I
Sbjct:   16 QPVRLYTKGVVLGYKRGLRNQINHTSLIKIQGVEDKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRAKFRKNLPPSCIGAPVRVMLYPSQI 121          
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match: A0A7S1TVH1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVH1_9STRA)

HSP 1 Score: 171 bits (433), Expect = 1.920e-52
Identity = 83/106 (78.30%), Postives = 93/106 (87.74%), Query Frame = 0
Query:    9 QPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTL-KNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 113
            QPVRLY KGV+LG+KRGLRN  +HTSLIKIQGVEDK+ + FYLGKRIAYIYKA T  K G+K+RV+WGKVCR HG+NGVVRAKFR NLPP  IGAPVRVMLYPS+I
Sbjct:   62 QPVRLYTKGVVLGYKRGLRNQINHTSLIKIQGVEDKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRAKFRKNLPPSCIGAPVRVMLYPSQI 167          
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match: A0A7R9U9P7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9P7_9STRA)

HSP 1 Score: 169 bits (427), Expect = 2.860e-52
Identity = 80/106 (75.47%), Postives = 94/106 (88.68%), Query Frame = 0
Query:    9 QPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTL-KNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 113
            QPVRLYVKGV+LG+KRG RN Y+HTSL+KIQGV++K+ + FYLGKRIAYIYKA T  K G+K+RV+WGKVCR HG+NGVVR KFR NLPP +IGAPVRVMLYPS+I
Sbjct:    8 QPVRLYVKGVVLGYKRGQRNQYNHTSLVKIQGVDEKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRCKFRKNLPPTSIGAPVRVMLYPSQI 113          
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match: A0A7S2XUS1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUS1_9STRA)

HSP 1 Score: 168 bits (425), Expect = 6.760e-52
Identity = 79/105 (75.24%), Postives = 92/105 (87.62%), Query Frame = 0
Query:    9 QPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 113
            QPVRLYVK VM+G+K GLR  + HT+L KIQGV+DK+++ FYLGK+IAYIYKA TLK  +KYRVVWGKV R HG+NGVVRAKFRTNLPPKAIG P+RVMLYPSK+
Sbjct:   14 QPVRLYVKAVMVGYKGGLRTQHCHTALAKIQGVDDKKSAGFYLGKKIAYIYKAHTLKKNSKYRVVWGKVTRAHGSNGVVRAKFRTNLPPKAIGGPLRVMLYPSKV 118          
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match: A0A329S8J7_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A329S8J7_9STRA)

HSP 1 Score: 166 bits (419), Expect = 8.090e-51
Identity = 78/107 (72.90%), Postives = 92/107 (85.98%), Query Frame = 0
Query:    7 SGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 113
            SGQP RLYVKGV LG+KRGLRN Y HT+L+KIQG+ DK+  +FYLGK+IAYIYKAK+LKNGT++RVVWGKV R HG+NGVVRAKF  NLP +AI   VRVMLYPS++
Sbjct:   24 SGQPTRLYVKGVFLGYKRGLRNQYSHTALVKIQGLTDKKDVDFYLGKKIAYIYKAKSLKNGTQFRVVWGKVMRAHGSNGVVRAKFAKNLPAEAISKSVRVMLYPSRV 130          
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match: K3W6U5_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3W6U5_GLOUD)

HSP 1 Score: 165 bits (417), Expect = 8.980e-51
Identity = 77/107 (71.96%), Postives = 91/107 (85.05%), Query Frame = 0
Query:    7 SGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 113
            SGQP RLYVKGV +G+KRGLRN Y HTSLIKIQG++DK+  +FYLGK+IAYIYK KTLKN +K+RV+WGKV R HG NG+VRAKF  NLP +AI A VRVMLYPS++
Sbjct:    5 SGQPTRLYVKGVFVGYKRGLRNQYSHTSLIKIQGLQDKKDVDFYLGKKIAYIYKGKTLKNNSKFRVIWGKVTRAHGNNGLVRAKFAKNLPAEAISASVRVMLYPSRV 111          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G033_ECTSI5.750e-77100.00Ribosomal protein L35 n=1 Tax=Ectocarpus siliculos... [more]
A0A836CIX4_9STRA1.480e-6081.98Ribosomal protein L35Ae-domain-containing protein ... [more]
A0A7S2SN13_9STRA2.180e-5578.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9CXD4_9STRA1.430e-5477.57Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S1XMC8_9STRA4.490e-5378.30Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1TVH1_9STRA1.920e-5278.30Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9U9P7_9STRA2.860e-5275.47Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2XUS1_9STRA6.760e-5275.24Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A329S8J7_9STRA8.090e-5172.90Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
K3W6U5_GLOUD8.980e-5171.96Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038661Ribosomal protein L35A superfamilyGENE3D2.40.10.190coord: 1..113
e-value: 2.3E-48
score: 164.5
IPR001780Ribosomal protein L35APFAMPF01247Ribosomal_L35Aecoord: 13..107
e-value: 1.0E-42
score: 144.2
IPR001780Ribosomal protein L35APANTHERPTHR1090260S RIBOSOMAL PROTEIN L35Acoord: 6..113
IPR001780Ribosomal protein L35AHAMAPMF_00573Ribosomal_L35Aecoord: 15..107
score: 24.564
NoneNo IPR availablePANTHERPTHR10902:SF0RIBOSOMAL PROTEIN L35Acoord: 6..113
NoneNo IPR availablePRODOMPD012670coord: 15..106
e-value: 2.0E-27
score: 298.0
IPR018266Ribosomal protein L35Ae, conserved sitePROSITEPS01105RIBOSOMAL_L35AEcoord: 75..96
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 13..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig97contigE-siliculosus-1a_M_contig97:498876..502903 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig97.17668.1mRNA_E-siliculosus-1a_M_contig97.17668.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig97 497825..503631 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig97.17668.1 ID=prot_E-siliculosus-1a_M_contig97.17668.1|Name=mRNA_E-siliculosus-1a_M_contig97.17668.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=114bp
MRTSPRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFY
LGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAI
GAPVRVMLYPSKI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009000Transl_B-barrel_sf
IPR018266Ribosomal_L35Ae_CS
IPR001780Ribosomal_L35A
IPR038661L35A_sf