Homology
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match:
D7G033_ECTSI (Ribosomal protein L35 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G033_ECTSI)
HSP 1 Score: 236 bits (601), Expect = 1.740e-70
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 3
Query: 723 STMRTSPRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 1067
STMRTSPRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI
Sbjct: 42 STMRTSPRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 156
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match:
A0A836CIX4_9STRA (Ribosomal protein L35Ae-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIX4_9STRA)
HSP 1 Score: 190 bits (482), Expect = 9.380e-54
Identity = 91/111 (81.98%), Postives = 102/111 (91.89%), Query Frame = 3
Query: 735 TSPRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 1067
+SPR QPVRLYVKGV+LG+KRGLRN Y+HTSLIKIQGVED A+ FYLGKRIAYIYKAK LKN +K+RV+WG+VCR HGTNGV+RAKFRTNLPPKAIGAPVRVMLYPS+I
Sbjct: 12 SSPR--QPVRLYVKGVVLGYKRGLRNQYNHTSLIKIQGVEDTAATEFYLGKRIAYIYKAKALKNNSKFRVIWGRVCRAHGTNGVIRAKFRTNLPPKAIGAPVRVMLYPSRI 120
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match:
A0A7S2SN13_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN13_9STRA)
HSP 1 Score: 177 bits (449), Expect = 4.640e-49
Identity = 84/107 (78.50%), Postives = 93/107 (86.92%), Query Frame = 3
Query: 747 SGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 1067
S QPVRLYVKGV+LG+KRGLRN Y HTSLIKIQGV+D + +FYLGKR+AYIYKA NG+KYRV+WGKVCR HGT GVVR KFRTNLPPKAIG PVRVMLYPS+I
Sbjct: 13 SSQPVRLYVKGVVLGYKRGLRNQYCHTSLIKIQGVDDCKDVDFYLGKRVAYIYKASNKVNGSKYRVIWGKVCRAHGTTGVVRCKFRTNLPPKAIGGPVRVMLYPSRI 119
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match:
A0A4D9CXD4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXD4_9STRA)
HSP 1 Score: 175 bits (443), Expect = 2.640e-48
Identity = 83/107 (77.57%), Postives = 94/107 (87.85%), Query Frame = 3
Query: 747 SGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 1067
S +PVRLYVKGV+LG+KRGLR +HTSLIKI G+++K++ +FYLGKRIAYIYKAKTLKN TKYR +WGKV R HGTNGVVRAKFR NLPPKAIG PVRVMLYPS I
Sbjct: 6 SSEPVRLYVKGVVLGYKRGLRQQTNHTSLIKIDGLDEKKSVDFYLGKRIAYIYKAKTLKNNTKYRAIWGKVTRAHGTNGVVRAKFRRNLPPKAIGGPVRVMLYPSTI 112
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match:
A0A7S1XMC8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMC8_9STRA)
HSP 1 Score: 171 bits (434), Expect = 6.610e-47
Identity = 83/106 (78.30%), Postives = 93/106 (87.74%), Query Frame = 3
Query: 753 QPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTL-KNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 1067
QPVRLY KGV+LG+KRGLRN +HTSLIKIQGVEDK+ + FYLGKRIAYIYKA T K G+K+RV+WGKVCR HG+NGVVRAKFR NLPP IGAPVRVMLYPS+I
Sbjct: 16 QPVRLYTKGVVLGYKRGLRNQINHTSLIKIQGVEDKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRAKFRKNLPPSCIGAPVRVMLYPSQI 121
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match:
A0A7S1TVH1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVH1_9STRA)
HSP 1 Score: 171 bits (434), Expect = 2.840e-46
Identity = 83/106 (78.30%), Postives = 93/106 (87.74%), Query Frame = 3
Query: 753 QPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTL-KNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 1067
QPVRLY KGV+LG+KRGLRN +HTSLIKIQGVEDK+ + FYLGKRIAYIYKA T K G+K+RV+WGKVCR HG+NGVVRAKFR NLPP IGAPVRVMLYPS+I
Sbjct: 62 QPVRLYTKGVVLGYKRGLRNQINHTSLIKIQGVEDKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRAKFRKNLPPSCIGAPVRVMLYPSQI 167
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match:
A0A7R9U9P7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9P7_9STRA)
HSP 1 Score: 169 bits (428), Expect = 3.610e-46
Identity = 80/106 (75.47%), Postives = 94/106 (88.68%), Query Frame = 3
Query: 753 QPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTL-KNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 1067
QPVRLYVKGV+LG+KRG RN Y+HTSL+KIQGV++K+ + FYLGKRIAYIYKA T K G+K+RV+WGKVCR HG+NGVVR KFR NLPP +IGAPVRVMLYPS+I
Sbjct: 8 QPVRLYVKGVVLGYKRGQRNQYNHTSLVKIQGVDEKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRCKFRKNLPPTSIGAPVRVMLYPSQI 113
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match:
A0A7S2XUS1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUS1_9STRA)
HSP 1 Score: 168 bits (426), Expect = 8.110e-46
Identity = 79/105 (75.24%), Postives = 92/105 (87.62%), Query Frame = 3
Query: 753 QPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 1067
QPVRLYVK VM+G+K GLR + HT+L KIQGV+DK+++ FYLGK+IAYIYKA TLK +KYRVVWGKV R HG+NGVVRAKFRTNLPPKAIG P+RVMLYPSK+
Sbjct: 14 QPVRLYVKAVMVGYKGGLRTQHCHTALAKIQGVDDKKSAGFYLGKKIAYIYKAHTLKKNSKYRVVWGKVTRAHGSNGVVRAKFRTNLPPKAIGGPLRVMLYPSKV 118
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match:
A0A329S8J7_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A329S8J7_9STRA)
HSP 1 Score: 166 bits (420), Expect = 8.310e-45
Identity = 78/107 (72.90%), Postives = 92/107 (85.98%), Query Frame = 3
Query: 747 SGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 1067
SGQP RLYVKGV LG+KRGLRN Y HT+L+KIQG+ DK+ +FYLGK+IAYIYKAK+LKNGT++RVVWGKV R HG+NGVVRAKF NLP +AI VRVMLYPS++
Sbjct: 24 SGQPTRLYVKGVFLGYKRGLRNQYSHTALVKIQGLTDKKDVDFYLGKKIAYIYKAKSLKNGTQFRVVWGKVMRAHGSNGVVRAKFAKNLPAEAISKSVRVMLYPSRV 130
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Match:
K3W6U5_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3W6U5_GLOUD)
HSP 1 Score: 165 bits (418), Expect = 8.720e-45
Identity = 77/107 (71.96%), Postives = 91/107 (85.05%), Query Frame = 3
Query: 747 SGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 1067
SGQP RLYVKGV +G+KRGLRN Y HTSLIKIQG++DK+ +FYLGK+IAYIYK KTLKN +K+RV+WGKV R HG NG+VRAKF NLP +AI A VRVMLYPS++
Sbjct: 5 SGQPTRLYVKGVFVGYKRGLRNQYSHTSLIKIQGLQDKKDVDFYLGKKIAYIYKGKTLKNNSKFRVIWGKVTRAHGNNGLVRAKFAKNLPAEAISASVRVMLYPSRV 111
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig97.17668.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 25
0 1 Expect = 1.74e-70 / Id = 100.00 Expect = 9.38e-54 / Id = 81.98 Expect = 4.64e-49 / Id = 78.50 Expect = 2.64e-48 / Id = 77.57 Expect = 6.61e-47 / Id = 78.30 Expect = 2.84e-46 / Id = 78.30 Expect = 3.61e-46 / Id = 75.47 Expect = 8.11e-46 / Id = 75.24 Expect = 8.31e-45 / Id = 72.90 Expect = 8.72e-45 / Id = 71.96 Sequence D7G033_ECTSI A0A836CIX4_9STRA A0A7S2SN13_9STRA A0A4D9CXD4_9STRA A0A7S1XMC8_9STRA A0A7S1TVH1_9STRA A0A7R9U9P7_9STRA A0A7S2XUS1_9STRA A0A329S8J7_9STRA K3W6U5_GLOUD Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1 Stop 1 Cds size 342 Model size 2121 Exons 5 Ec32 ortholog Ec-06_009110.1 Ec32 ortholog description 60S ribosomal protein L35a Hectar predicted targeting category other localisation BRITE br01610,ko00000,ko00001,ko00002,ko01000,ko01002,ko03011,ko03029 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. J EC 3.4.24.64 EggNOG OGs COG2451@1,KOG0887@2759 EggNOG free text desc. structural constituent of ribosome GOs GO:0000184,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015934,GO:0016070,GO:0016071,GO:0016072,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0033036,GO:0033365,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042254,GO:0042273,GO:0042886,GO:0043021,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046872,GO:0046907,GO:0046914,GO:0048519,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060255,GO:0065007,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904 KEGG Module M00177,M00179 KEGG Pathway ko03010,map03010 KEGG ko ko:K01412,ko:K02917 Preferred name RPL35A Seed eggNOG ortholog 2880.D7G033 Seed ortholog evalue 3.1e-59 Seed ortholog score 234.2 Taxonomic scope Eukaryota
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622936552.6937032-UTR-E-siliculosus-1a_M_contig97:497824..498875 1622936552.6937032-UTR-E-siliculosus-1a_M_contig97:497824..498875 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig97 497825..498875 - 1696251127.6917675-UTR-E-siliculosus-1a_M_contig97:497824..498875 1696251127.6917675-UTR-E-siliculosus-1a_M_contig97:497824..498875 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig97 497825..498875 - 1622936552.788298-UTR-E-siliculosus-1a_M_contig97:502903..503631 1622936552.788298-UTR-E-siliculosus-1a_M_contig97:502903..503631 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig97 502904..503631 - 1696251127.7601807-UTR-E-siliculosus-1a_M_contig97:502903..503631 1696251127.7601807-UTR-E-siliculosus-1a_M_contig97:502903..503631 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig97 502904..503631 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622936552.7144485-CDS-E-siliculosus-1a_M_contig97:498875..498929 1622936552.7144485-CDS-E-siliculosus-1a_M_contig97:498875..498929 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 498876..498929 - 1696251127.7065485-CDS-E-siliculosus-1a_M_contig97:498875..498929 1696251127.7065485-CDS-E-siliculosus-1a_M_contig97:498875..498929 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 498876..498929 - 1622936552.728285-CDS-E-siliculosus-1a_M_contig97:499455..499563 1622936552.728285-CDS-E-siliculosus-1a_M_contig97:499455..499563 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 499456..499563 - 1696251127.7169762-CDS-E-siliculosus-1a_M_contig97:499455..499563 1696251127.7169762-CDS-E-siliculosus-1a_M_contig97:499455..499563 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 499456..499563 - 1622936552.741994-CDS-E-siliculosus-1a_M_contig97:500214..500277 1622936552.741994-CDS-E-siliculosus-1a_M_contig97:500214..500277 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 500215..500277 - 1696251127.7278473-CDS-E-siliculosus-1a_M_contig97:500214..500277 1696251127.7278473-CDS-E-siliculosus-1a_M_contig97:500214..500277 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 500215..500277 - 1622936552.757552-CDS-E-siliculosus-1a_M_contig97:500669..500759 1622936552.757552-CDS-E-siliculosus-1a_M_contig97:500669..500759 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 500670..500759 - 1696251127.7387629-CDS-E-siliculosus-1a_M_contig97:500669..500759 1696251127.7387629-CDS-E-siliculosus-1a_M_contig97:500669..500759 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 500670..500759 - 1622936552.7722466-CDS-E-siliculosus-1a_M_contig97:502876..502903 1622936552.7722466-CDS-E-siliculosus-1a_M_contig97:502876..502903 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 502877..502903 - 1696251127.7487464-CDS-E-siliculosus-1a_M_contig97:502876..502903 1696251127.7487464-CDS-E-siliculosus-1a_M_contig97:502876..502903 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig97 502877..502903 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig97.17668.1
>prot_E-siliculosus-1a_M_contig97.17668.1 ID=prot_E-siliculosus-1a_M_contig97.17668.1|Name=mRNA_E-siliculosus-1a_M_contig97.17668.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=114bp
MRTSPRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFY back to top mRNA from alignment at E-siliculosus-1a_M_contig97:497825..503631-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig97.17668.1 ID=mRNA_E-siliculosus-1a_M_contig97.17668.1|Name=mRNA_E-siliculosus-1a_M_contig97.17668.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5807bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:497825..503631- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)TGATTTCCGTTGCTTTTAGCGTGGTAGAAAAGCTGGAGCTCTAGCTGCGT
CGTTTTTCTGGATCAAAAGTGGACTCGGAGGTAGATCAGCTTTGTGTGGT
TTGGGACGGTGTGAGGGTGTGTGTCTTTTGAGGCCATAGCCTCGCTCCAG
CAACTGCCATTTCAGGCCGGTGGCAGGGGAATCATTGCCGTGTGGCGTTC
CTGTGCTGGATGGCTCTTCGGAACTGGGAGCTGTGTCGGTTTGCTTCTCT
GCCAGAACAGCAGTTTGCCAGTGGTTGCTGATTTATAGGCATTCTCGAGG
ATCAGGGTGGCTTCGCATTCAGTGTTCAGGTGCCACAGCAGCGGTTCACG
TCCGACACGAAACACGTCGTGTTGGTCACACGTTGTGCTTCAGTCAGGCC
CTTGTACGACCTACGATAGCGTGCGATGGGATGTAGCCCCCACGAGGGAG
AGGTTTGCAATGTTGTCGCTATATTTTGGTCTGGTCTCACGAAGTGTGCC
CTACAGCAGCTACAGCAGTACGAACCGCAACGCGTAACCCGCCTCCGCTA
ATGTAGTGTCGTCGTGTCGCCCGACCGGCAGCTGAGACCGACTGATCCAA
CGCTTGTATTGTGGTGCTGCGTCTCTCTCTTTTGTCGGCTCACGTGTGCT
GGGGCCTCAAATGATGGTTTGCTTTGGCGGCGTGGCGCGAACCGTGGAAA
ACGTTGACGCTGGCCTCCTGGCAGCACC ATGCGCACTTCACCTCGCTCCG
GTCAG GTGAGAATCTCCTCCCTGTAGACCGCGACTGCTGCTGTGCAGTGG
TTGATACAGATTACCTTGCTTGGTGTTACCGTATTCCAATTCATCATGCA
GTGTGCACATAGTTGTGCTATTTGGTGTGATGCACACCGGCGATAGTTCG
CTGTCCGCCGTCTCTGCGCGTGGTGCTGTCAAAAGACTGTTGTGGGCAAA
AACTCGACAGAGTTGTTTTGGTCGGCGTGGAAAACGGTAATTGAGACATC
CAGCAGTCGGATACCGCATATTGTACCCAAGGTAAGATCGAGGTAGATCA
CCAGTATACATGTGCCTTCCGGTTGCGCGAGTGGGTGACTGTTGCTGGTG
TGGTCCTGCAGGAACGTTTTGTGCATCGTTCGTGATCCAGAGTCTGCTGC
GGTTGACGCCCTACGAAGATGCCGCCGCGCCTGCCATAACCCATGTTTGA
CTGCCGCCGCTGGCGTCGAGCCCGTTCATGTCGTTGTTGATGCCCAAGTG
AATTGGGCGTCTTTTGTGCCTGCGAAGACACCACTGCTGTTAGTTGCACC
CGCAAGCGATCTGCGCAGAAATATCGACCTGGCACCTCCCCAAAAGCATA
TCAACCAAGCTTCCGCCCCCCATTAGGGTTATTCGTGTTAGGTTCCGCCC
CGGGGGTTGAGGCAAGGGGCTGGAAACCTGCGGTATTTCCACCAGAACTA
CCCTCACAGAGAACAAACGAATGGGAGGTTTGCAGGCACTAGCTTGTGTC
TGTTAATGCCATTGTGCTCCCACTGGTCCAGGTTCCACCGTCCGCAGCAA
GCAGCCCCGGTTTCCCACGGGGCTCCGTGATGGTATTTTTTAACCAGCGG
TACCCAAAGCTTTTGAGACACTCCCAAAGGTCACGCGATCAACATTCTAG
GTAGAGGCCTCTCTACTGCCGTGGCTCTTTTCCATGTAGTACAGACTTGC
ACCAAAAAATTCTACTGCTGATAACGGCTTCAAGCACATAACGATGGACG
CTTTTTCGGCGTGGTGCCGACCAAGGCTCTAGGAAGAGAGGGCGTGTACA
ACAACAGGTCGAGGTACTCCATTGTTTTGGATGGTGTTGTGGAAACCTTT
GTTGGCGTTCCAGATCGACCAATCCAAACAACCTCAGGTCAAGCTGGCGC
GTTCCTGTGACACTGAAGCTTCACACGCTAGCAGACACAACAAAAAAAAC
AGGCCGATTCGGAGATGCGGTTTGGCTGTGCGCCGCGACATCGTTGTCGA
CCAACGTACAGTAGTAGGCCCGATGATGGAAGACGTTGGACGGGGGGTAG
CTTTCATTCGTAGGATCTTCCAAGGTACTTGGCGTAGTACCAGAAGAGGC
CGAGTGCCCGAAGGTTATGCAGTATATGATATCGATGCCCGGAGGGGGAG
CACGTATTCCACCCGAAACAGTTGGGCCATGGATGGGCATAGACAGGCTG
GAAATCGCAGGGATCCGCTGTTACGCCGATCGACGACCGCTCCAGCATGC
CCGCTTACGGGTGCCTCGGCGTAGCAAACCACTCTCTCTTTTTGTAGGCT
ACACGCCTCTTCCAAGGCTTTCACGCAGTCGGGAGCGCTGCCTTGATTTC
GCGTACAGTACACAGCGACCATGGCGCAGCGCATCTGCATCTTTCTTCCA
GGTCGACTACCGTTTTCGCCCGACCGAACACATTTTGTGTACATTCGAAA
TCTCATCTTCGTAAAGAGGAAATGCAGCAGCGCTGCCTGGTGTTGGGCCC
TCCGCGCCTGCACAAGCCTGGAGCGTTTCCCGGACCTGTCGCTGCCGCGT
GCAGCACTCTCTCTGCGTCTAACAGCCTCACGACAGCAAGAACCCTTTCG
ATTTGTACCGACTGACTGGCTGGCTCGATGACGTGCTTTCGAAGGAATCA
GTAGGTTGCCATCACTTGCTGCTATGCATACGTGCTTTTGCGGTCGAGGC
CTCTGGTTTCCTCTGGGTTTCGTCTCTCTTTCCGCGAAGGATGAACCGCC
ACCATTTCCCGCTGCTGTAATTCGAAAGTTTTGCATTTTGCCCGCCTAGC
AGACATTCTGCTGACCCCCCCCCCCCCCATCGCCTCTGAACTGGGTCCCC
CTCTCGTTGTTCGCTTGTGCAGCCCGTGCGGCTGTACGTGAAGGGCGTCA
TGCTTGGCTTCAAGCGTGGCCTTCGGAACACGTACCACCACACCTCCCTC
ATCAAGATCCAG GCAAGCTAGCTAAACGGCACTAATTCGATTTCGTGTGT
GATTTTCTCGTGTTGCGTACCTCCCCTTTCGCCTGACCATGTGTACAAGC
TGGTCGTGATCGTGTGCATGTGCGATGCGTGACCATGAAGAGGGGGCGTG
GTAGCTTGGTTCATGGCCGTTGCTACTGCCGATTGATCGGGATGGGTGCG
CGTCGCGATAATTTTCTTTGAGATGAACAATGCCCCTTATGCTGTGTGGT
GACTGATGATGAGGAATGATATCGAGTTGTTCTTGTGAACTCGTCGCGGA
CTAAAGTTTTTGCCGATTGCAAGGCCTCTCAAATCAACCAACGATCACCT
GATTGGAAGAAGACTGACGGCGATCATGCTCGCCGTTGCTTTTTTTCTTG
TCAGGGTGTGGAGGACAAGGAGGCGTCCAACTTTTACCTCGGGAAGCGCA
TCGCTTACATCTACAAG GTCAGAGTAACAGAGAGAACCGAACGGATAGTA
GCGTTCAACGGTACAAAAGCCAACCCACAAGAGTGTCGTGGCGGTTATCC
TGTCCGCGTGCCCCCACGGTAGACGGTAGCGTCGGGTGTGCTTGTAGTGA
TTGCACGCTTTGCGGTTTCCCCAGTGTTTTCTCGCACTTTAGACTCCTCT
GGATCGAAGATGTTGTTGCTGTCGAATCCGTCAGAGCTGGTAGAAGCCAC
GCGCGTACAAGGCACGTGTAGATCACAGCGCGCTTCTTCCTCCGATATTT
TTCCGTGGTGGTTTATGTTTGATGTACCTTGGCGTGTCAAGGTCTGCTGT
ATGAGTGTCAGAAAAGGATGCCGAGGGTACAGCCGCGAATGGGTCGAATG
CATGACCTCAATCTCCCGACGTGTGGATGTTTCGCTGCAAGCGCCGGACG
CTTGTCGCGACACTATTTCAAGTGTTTCCTCACGACGTGCTCTCTCTAGA
CCGTGCCATTTGGTGCTATCACGAGCGACAGGAAGACGGCTCGCGATCCT
AGATGAGTAGGTACGGTTGGAGCGTTGTTGAACAATTGCTTAAGGGAGGG
TATTGATGCCCTTACCCTGGTTCTGGTACACCGTTGCTGCTGCTGCTGCT
GTGATTGGTGGTTTGCAGGCGAAGACGCTCAAGAACGGGACCAAGTACCG
CGTGGTGTGGGGCAAGGTGTGCCGCGGGCACGGCACCAACGGGGTTGTAC
GGGCCAAGTTCAGGACTAACCTCCCG GTAAGCAAGCAGCAAGCATGCTTC
CTGAACTTGCGTTGTCGGTGGCCTCTGTTTCATGCGTGAAGGGTTTTGTT
TTTGGTTGTTGGGGGCACTCCTGTGGGTTGTGGAGCATGTCTCGTTTGGA
ATCCCCCCCCCCGGATGATATCTCTCCAACATTGCCCTCTTTGTCACCGG
CAGAGCGGTGGAGCTTTGAGGTTCGGTCCGAAGTATAGACCGTAGGCGCG
TGAAGCTTCGCTTCAGTGCCAGTCTCGCAAAATTCGGAGGGTTGTGTTGG
TAATTGGAGGAGGTGGAGGAGCGTGCAGAGTTTTTTTGCAAGAAGAGACA
TGGCATGACCACGGTTCTTGACGCACTTTGAAAATCGCCGGAAATTAAGG
GTGCGAGTTTGTTCTTGTATTCGCTCGTACAGTGTTTGCGTGGGGGCCTT
CATGTTTGGTACTCTCTCTTCTCCGTCGTGCCACCACCCGTCTCACCCCC
CCCTCTCTCCCCGCCCTCCGCCCTCCCCCTCCCCGCTTCTCTCCCGTCGC
AGCCCAAGGCAATCGGTGCTCCCGTGCGCGTGATGCTCTACCCATCAAAG
ATCTAA CTCTGCAGTGTGGCGAGCTATCTGTTTGGAAATGATCCCGGACG
GCCAATTGTAGCCAAGCCAGCGAGGCCTGTTGGCGATCAAGGCGCGTGCG
GTACGTCCGTCGAAGAGGATAGCCACCTCCGGCGGTCCGTGTCGTAGTCT
TTGCCCAGCGCGGACATGGCGGCTAGGTTGTTGGAAGGGGTGGAGAGGCG
GACGTACGTGAGCGCGGCGAAATGAACAAGCACACGCTGCCGAGTGCTGG
CTGTTGTTTTCGCGGTTTGCATCTGGTGACGGTGTTTTAGCGTCGAGGCT
GTGGTGCGTTCGTTCGGTGGGGGGTGAATATAAAGCTTCACGACCTACCC
GCAGGTTGAACAAAAAAAATGAAACTCCAATTACTCACAAACCACGTCTC
AACAAAGCACACCGTGTTTCCCACCTCCCTATCGTCCACGGAACGGTACA
ATACCGCGGTACAACGGTCGTGAACGCATGCATAGAGAGGACATGTGCTG
GGACAACCGCATGCCTCGATTCGCTCCTCACCGGTGGTGCTTGCGTGTCC
TTTTACGTATGCATACATGTGTACGAGCGTCACGTTCGAGCTTGTTCACC
GATCGGTACGAGTCACTATTTAGCTTGACGAATTCAATCATGAGCGCGGT
GTGTGTTGCTCACACAGAGCAGAAGGGCTGTCGTACAAGGGGCACCTCGC
AACGTTCCAGCTGTCCATTACAGTAGATGGCTTGGTGTTGTAGTTAGCGT
TTGTGCTTGTTCCTCCGCCGCCGGGAAAAAACCCAAAGACCTCTGTCGTG
GTGACCCGTTTCGGTGTGATACCAGTATTGTTGTTGTGTTCGGGATTGCT
CATCTTCGACGACACCGAGTAGGACCCACCCACCATTGTTCCGAGGTGGG
GAGAGCCAACGGAGAGTAATAAATGCAACACACGTTCAACACGTCCGTGT
TTGTACACGTTTGCAACAACACGTCCCGGACACACCTGTGGCTGAACTGA
CGTAGGCACCACACACACAAACCCAGAGAACCGGTCCTGACCCCCTTAGA
TGTTTTC back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig97:497825..503631-
>mRNA_E-siliculosus-1a_M_contig97.17668.1 ID=mRNA_E-siliculosus-1a_M_contig97.17668.1|Name=mRNA_E-siliculosus-1a_M_contig97.17668.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=684bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:497825..503631- (Ectocarpus siliculosus Ec864m_EcPH12_78m male) back to top