Homology
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Match:
D7FU01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU01_ECTSI)
HSP 1 Score: 201 bits (512), Expect = 1.160e-65
Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 1
Query: 1 MSDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVIIMVECSELASFHAGIKRTSISAPGAH-VRWVRVDICRRFRERSNPEE 297
MSDEEPWEPLTM DYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVIIMVECSE+A FHAGI+RTSISAPGA VRWVRVDICRRFRERSNPEE
Sbjct: 1 MSDEEPWEPLTMADYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVIIMVECSEVAGFHAGIQRTSISAPGARDVRWVRVDICRRFRERSNPEE 100
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Match:
D7FTZ7_ECTSI (Similar to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ7_ECTSI)
HSP 1 Score: 115 bits (289), Expect = 1.980e-28
Identity = 50/55 (90.91%), Postives = 52/55 (94.55%), Query Frame = 1
Query: 1 MSDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVIIM 165
MSDEEPWEPLT VDY+MLG+VG FQAFALGVCIHL RWRKWPPYVTKNVDIVIIM
Sbjct: 1 MSDEEPWEPLTFVDYVMLGMVGAFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIM 55
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Match:
D7FU03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU03_ECTSI)
HSP 1 Score: 106 bits (265), Expect = 1.040e-27
Identity = 46/55 (83.64%), Postives = 48/55 (87.27%), Query Frame = 1
Query: 1 MSDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVIIM 165
MSDEE WEPLTMVDY MLG VGT QAFALGVC+HL WR WPPYVTKNVDIVI+M
Sbjct: 1 MSDEEVWEPLTMVDYTMLGFVGTVQAFALGVCVHLLIWRNWPPYVTKNVDIVIVM 55
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Match:
D7FTZ9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ9_ECTSI)
HSP 1 Score: 113 bits (282), Expect = 1.470e-27
Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 1
Query: 1 MSDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVIIM 165
MSDEE WEPLTMVDYLMLGIVGTFQA ALGVC+HLF WR WPPYVTKNVDIVIIM
Sbjct: 1 MSDEELWEPLTMVDYLMLGIVGTFQALALGVCVHLFLWRNWPPYVTKNVDIVIIM 55
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Match:
D7FTZ5_ECTSI (Signal transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ5_ECTSI)
HSP 1 Score: 112 bits (279), Expect = 6.750e-27
Identity = 51/68 (75.00%), Postives = 54/68 (79.41%), Query Frame = 1
Query: 1 MSDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVIIMVECSELASFHAGI 204
M D+EPWEPL VDYLMLGIV TFQAFALGVCIHL RWRKWPPYVTKNVDIVIIM +F A +
Sbjct: 1 MPDKEPWEPLAFVDYLMLGIVCTFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTFAGFAWTFAAAV 68
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Match:
A0A6H5JJQ0_9PHAE (RGS domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJQ0_9PHAE)
HSP 1 Score: 108 bits (269), Expect = 1.340e-25
Identity = 46/55 (83.64%), Postives = 49/55 (89.09%), Query Frame = 1
Query: 1 MSDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVIIM 165
MSDEE WEPLTMVDY+MLG VGT QAFALGVC+HL WR WPPYVTKNVDIVI+M
Sbjct: 1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLLSWRHWPPYVTKNVDIVIVM 55
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Match:
A0A6H5K025_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K025_9PHAE)
HSP 1 Score: 105 bits (261), Expect = 1.180e-24
Identity = 45/56 (80.36%), Postives = 48/56 (85.71%), Query Frame = 1
Query: 1 MSDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVIIMV 168
MSD+E WEPL MVDY+MLG VGT Q FALGVCIHL WR WPPYVTKNVDIVI+MV
Sbjct: 1 MSDKEVWEPLAMVDYIMLGFVGTVQTFALGVCIHLLSWRHWPPYVTKNVDIVIVMV 56
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Match:
D7FIS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS2_ECTSI)
HSP 1 Score: 95.5 bits (236), Expect = 1.980e-23
Identity = 38/54 (70.37%), Postives = 46/54 (85.19%), Query Frame = 1
Query: 1 MSDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVII 162
MSD +PWEPL M+D+ +LG+V TFQ ALGVC HL +WRKWPPY+TKNVD+VII
Sbjct: 1 MSDNQPWEPLGMLDFFVLGMVSTFQLVALGVCAHLVKWRKWPPYLTKNVDVVII 54
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Match:
D7FIR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR8_ECTSI)
HSP 1 Score: 85.5 bits (210), Expect = 3.010e-18
Identity = 41/86 (47.67%), Postives = 53/86 (61.63%), Query Frame = 1
Query: 4 SDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVIIMVECSELASFHAGIKRTSISAPGAHVRWVRVDI 261
++ E WEPL+ D+ +LG V TFQA AL VC HL RWRKWPPYVTKNVD+VII ++F + S+ ++R DI
Sbjct: 3 AEGEVWEPLSTPDFWVLGFVATFQAVALLVCAHLLRWRKWPPYVTKNVDVVII-------STFSGVLWNVSMIISSGYIRREAGDI 81
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Match:
A0A6H5KAT5_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT5_9PHAE)
HSP 1 Score: 87.0 bits (214), Expect = 7.750e-18
Identity = 36/54 (66.67%), Postives = 43/54 (79.63%), Query Frame = 1
Query: 1 MSDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVII 162
M+++E WEPL+ D+ +LG V TFQ AL VC HL RWRKWPPYVTKNVD+VII
Sbjct: 1 MAEDEVWEPLSTPDFWVLGFVATFQTVALLVCAHLLRWRKWPPYVTKNVDVVII 54
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 11
0 1 Expect = 1.16e-65 / Id = 94.00 Expect = 1.98e-28 / Id = 90.91 Expect = 1.04e-27 / Id = 83.64 Expect = 1.47e-27 / Id = 90.91 Expect = 6.75e-27 / Id = 75.00 Expect = 1.34e-25 / Id = 83.64 Expect = 1.18e-24 / Id = 80.36 Expect = 1.98e-23 / Id = 70.37 Expect = 3.01e-18 / Id = 47.67 Expect = 7.75e-18 / Id = 66.67 Sequence D7FU01_ECTSI D7FTZ7_ECTSI D7FU03_ECTSI D7FTZ9_ECTSI D7FTZ5_ECTSI A0A6H5JJQ0_9PHAE A0A6H5K025_9PHAE D7FIS2_ECTSI D7FIR8_ECTSI A0A6H5KAT5_9PHAE Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1 Stop 1 Cds size 300 Model size 300 Exons 3 Ec32 ortholog Ec-11_003440.1 Ec32 ortholog description hypothetical protein Hectar predicted targeting category other localisation BRITE ko00000 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. S EggNOG OGs 2CNEE@1,2QVMV@2759 EggNOG free text desc. Regulator of G protein signaling domain GOs GO:0001101,GO:0003674,GO:0004888,GO:0004930,GO:0005096,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005886,GO:0006950,GO:0007154,GO:0007165,GO:0007186,GO:0008047,GO:0008150,GO:0009414,GO:0009415,GO:0009628,GO:0009719,GO:0009725,GO:0009737,GO:0009743,GO:0009746,GO:0009749,GO:0009756,GO:0009987,GO:0010008,GO:0010033,GO:0010035,GO:0010182,GO:0012505,GO:0016020,GO:0023052,GO:0030234,GO:0030695,GO:0031090,GO:0031410,GO:0031982,GO:0033993,GO:0034284,GO:0038023,GO:0042127,GO:0042221,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043547,GO:0044093,GO:0044422,GO:0044424,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051336,GO:0051345,GO:0051716,GO:0060089,GO:0060589,GO:0065007,GO:0065009,GO:0070887,GO:0071310,GO:0071322,GO:0071944,GO:0097305,GO:0097708,GO:0098588,GO:0098772,GO:0098805,GO:1901700,GO:1901701 KEGG ko ko:K16449 Preferred name RGS1 Seed eggNOG ortholog 2880.D7FTZ7 Seed ortholog evalue 3.7e-24 Seed ortholog score 117.5 Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig97.17634.1
>prot_E-siliculosus-1a_M_contig97.17634.1 ID=prot_E-siliculosus-1a_M_contig97.17634.1|Name=mRNA_E-siliculosus-1a_M_contig97.17634.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=100bp
MSDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVD back to top mRNA from alignment at E-siliculosus-1a_M_contig97:40166..40932+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig97.17634.1 ID=mRNA_E-siliculosus-1a_M_contig97.17634.1|Name=mRNA_E-siliculosus-1a_M_contig97.17634.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=767bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:40166..40932+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)ATGTCGGATGAAGAGCCGTGGGAGCCTTTGACCATGGTGGATTACCTCAT
GCTTGGAATTGTGGGTACCTTCCAAGCGTTTGCCCTGGGCGTGTGCATCC
ATCTATTTCGTTGGCGGAAGTGGCCACCATACGTCACCAAGAACGTCGAC
ATCGTCATCATCATG GTGAGTGGGGTATGTAATTAATGAGGGGGGTGTTG
CTGTTGGTGCTGTTGTTTCTGCTGCCGCCGCTCAGCAACTTTCAGTAAGC
GTGCCGTGCGTGCCTCTCGGATCTGCTGGGTTGAAGTCGCCGCTCATCCT
GCAAGGTTGAGTGCTCCGAGTTGGCCAGCTTCCACGCAGGGATAAAGCGA
ACGTCGATATCCGCACCTGGTGCTC GTGATGAGGGCAAGTTGCTGTTGCA
AGGGTGTGCTCTTGCGCTTGTTTGCCCGTCTCGCCAGGACCTTTCCCTGC
GAGCTGCCCGTATTCAAGAGCAACTACCAGTGGCAAACCATCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACATCTCTC
TACCTCATTCTCTGCTTGCATCCCTCTCCCGTTGACTTCTCGGACTCTTT
ACGCTTTTCCCTCTGCCTCTTCGACCAACCCCCCGGCTCTCCCCCTCTCT
TGCGCTTTTCGTGCTTCTCCCGTCCTCGATCCCGCTGGCTGCATACCTCC
AGACGTTCGCTGGGTTCGCGTGGACATTTGCAGGCGCTTTAGAGAACGGT
CTAATCCGGAGGAGTGA back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig97:40166..40932+
>mRNA_E-siliculosus-1a_M_contig97.17634.1 ID=mRNA_E-siliculosus-1a_M_contig97.17634.1|Name=mRNA_E-siliculosus-1a_M_contig97.17634.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=600bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:40166..40932+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male) back to top