Homology
BLAST of mRNA_E-siliculosus-1a_M_contig97.17643.1 vs. uniprot
Match:
A0A6H5KWC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWC1_9PHAE)
HSP 1 Score: 194 bits (493), Expect = 1.290e-61
Identity = 94/104 (90.38%), Postives = 98/104 (94.23%), Query Frame = -2
Query: 2 ITGPRRIASGLLTIAKSHCGNPKIMRFLSPCACGDDNRIVEDTPAADVHVDDAELGAFLDDMDGSALNIRLGREIAGNVLGLSAWYGVWWEWEGAGCLYIAFGN 313
+TGPRRIASGLLTIAKSH GNPKIMR LSP ACGDDN IVEDTPAADVHVDDAELGAFLD+MDGS L+IR+GREIAGNVLGLSAW GVWWEWEGAGCLYIAFGN
Sbjct: 1 MTGPRRIASGLLTIAKSHYGNPKIMRVLSPYACGDDNLIVEDTPAADVHVDDAELGAFLDEMDGSTLSIRMGREIAGNVLGLSAWCGVWWEWEGAGCLYIAFGN 104
BLAST of mRNA_E-siliculosus-1a_M_contig97.17643.1 vs. uniprot
Match:
A0A6H5K844_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K844_9PHAE)
HSP 1 Score: 162 bits (410), Expect = 7.490e-50
Identity = 79/94 (84.04%), Postives = 86/94 (91.49%), Query Frame = -2
Query: 44 MLQFITGPRRIASGLLTIAKSHCGNPKIMRFLSPCACGDDNRIVEDTPAADVHVDDAELGAFLDDMDGSALNIRLGREIAGNVLGLSAWYGVWW 325
MLQF+TGP RIASGL TIAKSH GNPK +R LS CACGDDN IVEDTPAADVHVDDAELGAFLD+M+GSAL+IR+GR+IAGNVLGLSAW GVWW
Sbjct: 1 MLQFMTGPHRIASGLRTIAKSHYGNPKNLRLLSACACGDDNLIVEDTPAADVHVDDAELGAFLDEMNGSALSIRMGRDIAGNVLGLSAWCGVWW 94
BLAST of mRNA_E-siliculosus-1a_M_contig97.17643.1 vs. uniprot
Match:
A0A6H5K3D5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D5_9PHAE)
HSP 1 Score: 161 bits (408), Expect = 1.420e-49
Identity = 81/93 (87.10%), Postives = 86/93 (92.47%), Query Frame = -2
Query: 47 MLQFITGPRRIASGLLTIAKSHCGNPKIMRFLSPCACGDDNRIVEDTPAADVHVDDAELGAFLDDMDGSALNIRLGREIAGNVLGLSAWYGVW 325
ML+F+TGPRRIASGLLTIAKSH GNPKIMR LSP ACGDDN VEDTPAA VHVDDAELGAFLD+MDGSAL+IR+GREIAGNVLGLSAW GVW
Sbjct: 1 MLRFMTGPRRIASGLLTIAKSHYGNPKIMRLLSPHACGDDNLSVEDTPAAGVHVDDAELGAFLDEMDGSALSIRMGREIAGNVLGLSAWCGVW 93
BLAST of mRNA_E-siliculosus-1a_M_contig97.17643.1 vs. uniprot
Match:
A0A6H5KLK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLK7_9PHAE)
HSP 1 Score: 104 bits (259), Expect = 3.330e-27
Identity = 52/67 (77.61%), Postives = 59/67 (88.06%), Query Frame = -2
Query: 125 MLQFITGPRRIASGLLTIAKSHCGNPKIMRFLSPCACGDDNRIVEDTPAADVHVDDAELGAFLDDMD 325
MLQF+TGPRR ASG+LTI KS GNPKIMRFLSP A GDDN IVE+TPA DVHV+DAELGA+LD+M+
Sbjct: 1 MLQFMTGPRRHASGILTIPKSDYGNPKIMRFLSPHAGGDDNLIVEETPAEDVHVEDAELGAYLDEMN 67
BLAST of mRNA_E-siliculosus-1a_M_contig97.17643.1 vs. uniprot
Match:
A0A6H5JUE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE1_9PHAE)
HSP 1 Score: 107 bits (268), Expect = 7.320e-26
Identity = 51/71 (71.83%), Postives = 62/71 (87.32%), Query Frame = -2
Query: 125 FWYSMLQFITGPRRIASGLLTIAKSHCGNPKIMRFLSPCACGDDNRIVEDTPAADVHVDDAELGAFLDDMD 337
FWYSMLQF+TGPRR ASG+LTI S GNPKIMRFLSP A G+DN +VE+TPA DVHV+D++LGA+LD+M+
Sbjct: 253 FWYSMLQFMTGPRRHASGILTIPNSDYGNPKIMRFLSPHAGGNDNLVVEETPAEDVHVEDSDLGAYLDEMN 323
BLAST of mRNA_E-siliculosus-1a_M_contig97.17643.1 vs. uniprot
Match:
A0A6H5K6X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6X8_9PHAE)
HSP 1 Score: 103 bits (256), Expect = 8.180e-24
Identity = 49/71 (69.01%), Postives = 60/71 (84.51%), Query Frame = -2
Query: 125 FWYSMLQFITGPRRIASGLLTIAKSHCGNPKIMRFLSPCACGDDNRIVEDTPAADVHVDDAELGAFLDDMD 337
FW SMLQF+TGPRR ASG+LTI KS GNPKIMRFLSP G+DN +VE+TPA DVHV+D++LG +LD+M+
Sbjct: 302 FWNSMLQFMTGPRRHASGILTIPKSDFGNPKIMRFLSPYVGGNDNLVVEETPAEDVHVEDSDLGEYLDEMN 372
BLAST of mRNA_E-siliculosus-1a_M_contig97.17643.1 vs. uniprot
Match:
A0A6H5JV29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV29_9PHAE)
HSP 1 Score: 95.5 bits (236), Expect = 9.980e-23
Identity = 45/67 (67.16%), Postives = 57/67 (85.07%), Query Frame = -2
Query: 125 MLQFITGPRRIASGLLTIAKSHCGNPKIMRFLSPCACGDDNRIVEDTPAADVHVDDAELGAFLDDMD 325
+ QF+TGPRR ASG+LTI KS GNPKIMRFLSP G+DN +VE+TPA DVHV+D++LGA+LD+M+
Sbjct: 83 LAQFMTGPRRHASGILTIPKSDFGNPKIMRFLSPYVGGNDNLVVEETPAEDVHVEDSDLGAYLDEMN 149
BLAST of mRNA_E-siliculosus-1a_M_contig97.17643.1 vs. uniprot
Match:
A0A6H5KA09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA09_9PHAE)
HSP 1 Score: 97.4 bits (241), Expect = 1.310e-22
Identity = 49/73 (67.12%), Postives = 59/73 (80.82%), Query Frame = -2
Query: 125 NSFWYSMLQFITGPRRIASGLLTIAKSHCGNPKIMRFLSPCACGDDNRIVEDTPAADVHVDDAELGAFLDDMD 343
FWYSMLQF+TGPRRIASG+LTI KS GNPKIMRFLSP A G+DN +VE+TPA D++LGA+LD+M+
Sbjct: 164 EKFWYSMLQFMTGPRRIASGILTIPKSDYGNPKIMRFLSPHAGGNDNLVVEETPAEG---GDSDLGAYLDEMN 233
BLAST of mRNA_E-siliculosus-1a_M_contig97.17643.1 vs. uniprot
Match:
A0A6H5KEJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEJ3_9PHAE)
HSP 1 Score: 91.3 bits (225), Expect = 2.500e-19
Identity = 44/61 (72.13%), Postives = 49/61 (80.33%), Query Frame = -2
Query: 161 NSFWYSMLQFITGPRRIASGLLTIAKSHCGNPKIMRFLSPCACGDDNRIVEDTPAADVHVD 343
FWYSMLQF+TGPRR SG+LTI KS GNPKIMRFLSP A G DN +VE+TPA DVHV+
Sbjct: 317 EGFWYSMLQFMTGPRRHVSGILTIPKSDYGNPKIMRFLSPHAGGKDNLVVEETPAEDVHVE 377
BLAST of mRNA_E-siliculosus-1a_M_contig97.17643.1 vs. uniprot
Match:
A0A6H5K1Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1Q8_9PHAE)
HSP 1 Score: 87.4 bits (215), Expect = 1.200e-18
Identity = 42/58 (72.41%), Postives = 47/58 (81.03%), Query Frame = -2
Query: 170 NSFWYSMLQFITGPRRIASGLLTIAKSHCGNPKIMRFLSPCACGDDNRIVEDTPAADV 343
FWYSMLQF+TGPRR ASG+LTI KS GNPKIMRFLSP G+DN +VE+TPA DV
Sbjct: 82 EGFWYSMLQFMTGPRRHASGILTIPKSDFGNPKIMRFLSPYVGGNDNLVVEETPAEDV 139
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig97.17643.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 14
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig97.17643.1
>prot_E-siliculosus-1a_M_contig97.17643.1 ID=prot_E-siliculosus-1a_M_contig97.17643.1|Name=mRNA_E-siliculosus-1a_M_contig97.17643.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=114bp
MYKQPAPSHSHQTPYQALRPRTLPAISRPKRMLSADPSMSSRNAPSSASS
TCTSAAGVSSTMRLSSPQAHGDRKRMILGFPQCDLAMVRSPEAMRRGPVM
NCSMEYQKLFQST*
back to topmRNA from alignment at E-siliculosus-1a_M_contig97:144695..145050+
Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig97.17643.1 ID=mRNA_E-siliculosus-1a_M_contig97.17643.1|Name=mRNA_E-siliculosus-1a_M_contig97.17643.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=356bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:144695..145050+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
TATTGCCGAACGCTATGTACAAGCAACCTGCTCCCTCCCACTCCCACCAA
ACACCATACCAAGCGCTAAGGCCGAGAACATTGCCAGCAATTTCGCGACC
CAAGCGGATGTTAAGCGCTGATCCGTCCATGTCGTCGAGAAATGCGCCGA
GCTCGGCATCGTCGACGTGCACGTCTGCGGCCGGGGTGTCTTCCACGATG
CGATTGTCGTCCCCGCAGGCGCACGGGGACAGGAAGCGCATGATCTTGGG
GTTCCCGCAGTGCGACTTGGCGATGGTCAGGAGTCCGGAGGCTATGCGAC
GCGGGCCCGTTATGAACTGCAGCATGGAGTACCAGAAACTGTTCCAAAGC
ACGTAG
back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig97:144695..145050+
>mRNA_E-siliculosus-1a_M_contig97.17643.1 ID=mRNA_E-siliculosus-1a_M_contig97.17643.1|Name=mRNA_E-siliculosus-1a_M_contig97.17643.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=684bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:144695..145050+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTACAAGCAACCTGCTCCCTCCCACTCCCACCAAACACCATACCAAGC
GCTAAGGCCGAGAACATTGCCAGCAATTTCGCGACCCAAGCGGATGTTAA
GCGCTGATCCGTCCATGTCGTCGAGAAATGCGCCGAGCTCGGCATCGTCG
ACGTGCACGTCTGCGGCCGGGGTGTCTTCCACGATGCGATTGTCGTCCCC
GCAGGCGCACGGGGACAGGAAGCGCATGATCTTGGGGTTCCCGCAGTGCG
ACTTGGCGATGGTCAGGAGTCCGGAGGCTATGCGACGCGGGCCCGTTATG
AACTGCAGCATGGAGTACCAGAAACTGTTCCAAAGCACGTAGATGTACAA
GCAACCTGCTCCCTCCCACTCCCACCAAACACCATACCAAGCGCTAAGGC
CGAGAACATTGCCAGCAATTTCGCGACCCAAGCGGATGTTAAGCGCTGAT
CCGTCCATGTCGTCGAGAAATGCGCCGAGCTCGGCATCGTCGACGTGCAC
GTCTGCGGCCGGGGTGTCTTCCACGATGCGATTGTCGTCCCCGCAGGCGC
ACGGGGACAGGAAGCGCATGATCTTGGGGTTCCCGCAGTGCGACTTGGCG
ATGGTCAGGAGTCCGGAGGCTATGCGACGCGGGCCCGTTATGAACTGCAG
CATGGAGTACCAGAAACTGTTCCAAAGCACGTAG
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