Homology
BLAST of mRNA_E-siliculosus-1a_M_contig96.17604.1 vs. uniprot
Match:
D7FWI8_ECTSI (Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7FWI8_ECTSI)
HSP 1 Score: 218 bits (556), Expect = 7.610e-72
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1
Query: 1 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 348
MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 1 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
BLAST of mRNA_E-siliculosus-1a_M_contig96.17604.1 vs. uniprot
Match:
A0A6U0X3U9_9STRA (Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A6U0X3U9_9STRA)
HSP 1 Score: 198 bits (503), Expect = 1.500e-63
Identity = 102/116 (87.93%), Postives = 112/116 (96.55%), Query Frame = 1
Query: 1 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 348
MAKTPSKKSAKAPKKAGDK + KRTESYSSYIYKVLKQVHP+TGISK+GMSIMNSFIND+FER+AGE+G+L RY+KKATLSSRE+QT+VRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 15 MAKTPSKKSAKAPKKAGDKVKKGKRTESYSSYIYKVLKQVHPETGISKKGMSIMNSFINDIFERLAGEAGRLARYSKKATLSSREIQTSVRLMLPGELAKHAVSEGTKAVTKFTSS 130
BLAST of mRNA_E-siliculosus-1a_M_contig96.17604.1 vs. uniprot
Match:
A0A836CJ22_9STRA (Histone H2B n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ22_9STRA)
HSP 1 Score: 194 bits (494), Expect = 2.320e-62
Identity = 104/117 (88.89%), Postives = 110/117 (94.02%), Query Frame = 1
Query: 1 MAKTPSKKSAKAPKKAGD-KKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 348
MAK PSKK+AKAPKKA D KK+ KRTESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 1 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 117
BLAST of mRNA_E-siliculosus-1a_M_contig96.17604.1 vs. uniprot
Match:
H2B_OLILU (Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=H2B_OLILU)
HSP 1 Score: 190 bits (483), Expect = 9.690e-61
Identity = 99/116 (85.34%), Postives = 110/116 (94.83%), Query Frame = 1
Query: 1 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 348
MAKTPSKK+AKAPKKAG K+ NKR E+YSSYIYKVLKQVHPDTGISKRGMSIMNSFIND+FER+AGE+ +L RYNK++TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 1 MAKTPSKKAAKAPKKAGSKR--NKRVETYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDIFERLAGEASRLARYNKRSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSN 114
BLAST of mRNA_E-siliculosus-1a_M_contig96.17604.1 vs. uniprot
Match:
A0A485K2U0_9STRA (Histone H2B n=29 Tax=Stramenopiles TaxID=33634 RepID=A0A485K2U0_9STRA)
HSP 1 Score: 190 bits (483), Expect = 1.140e-60
Identity = 101/118 (85.59%), Postives = 110/118 (93.22%), Query Frame = 1
Query: 1 MAKTPSKKSAKAPKKAGDK--KRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 348
MAKTPSKKSAKAPKK G+K R KR ESYS+YIYKVLKQVHP+TGISKRGMSIMNSFIND+FER+A E+GKL+RYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 1 MAKTPSKKSAKAPKKTGEKGKNRKVKRIESYSTYIYKVLKQVHPETGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 118
BLAST of mRNA_E-siliculosus-1a_M_contig96.17604.1 vs. uniprot
Match:
A0A836CJT3_9STRA (Histone H2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJT3_9STRA)
HSP 1 Score: 194 bits (494), Expect = 1.580e-60
Identity = 104/117 (88.89%), Postives = 110/117 (94.02%), Query Frame = 1
Query: 1 MAKTPSKKSAKAPKKAGD-KKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 348
MAK PSKK+AKAPKKA D KK+ KRTESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 134 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 250
BLAST of mRNA_E-siliculosus-1a_M_contig96.17604.1 vs. uniprot
Match:
B7FWR8_PHATC (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B7FWR8_PHATC)
HSP 1 Score: 188 bits (478), Expect = 5.980e-60
Identity = 98/116 (84.48%), Postives = 108/116 (93.10%), Query Frame = 1
Query: 1 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 348
MAKTPSK+SAKAPKKA ++ KRTE+YSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+SS
Sbjct: 1 MAKTPSKQSAKAPKKAATGTKSKKRTETYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIATEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSS 116
BLAST of mRNA_E-siliculosus-1a_M_contig96.17604.1 vs. uniprot
Match:
A0A6U6DWX5_9STRA (Histone H2B n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6DWX5_9STRA)
HSP 1 Score: 187 bits (474), Expect = 2.860e-59
Identity = 100/116 (86.21%), Postives = 110/116 (94.83%), Query Frame = 1
Query: 1 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 348
MAKTPSKK+A APKKAG K R+ KRTESYSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct: 8 MAKTPSKKAA-APKKAGGK-RSRKRTESYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIASEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 121
BLAST of mRNA_E-siliculosus-1a_M_contig96.17604.1 vs. uniprot
Match:
B8BX20_THAPS (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B8BX20_THAPS)
HSP 1 Score: 181 bits (460), Expect = 3.770e-57
Identity = 100/120 (83.33%), Postives = 112/120 (93.33%), Query Frame = 1
Query: 1 MAKTPSKKS-AKAPKKA--GDKK-RTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 348
MAKTPSK++ AKA KKA GDKK R+ KR ESYS+YIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+AGE+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct: 1 MAKTPSKQAPAKAAKKAATGDKKKRSKKRVESYSTYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIAGEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 120
BLAST of mRNA_E-siliculosus-1a_M_contig96.17604.1 vs. uniprot
Match:
A0A7S2U5X6_9STRA (Histone H2B (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U5X6_9STRA)
HSP 1 Score: 180 bits (456), Expect = 1.350e-56
Identity = 96/112 (85.71%), Postives = 102/112 (91.07%), Query Frame = 1
Query: 1 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTK 336
MAKTPSKKSA PKKA KR KR ESYSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTK
Sbjct: 6 MAKTPSKKSA-VPKKASTGKRNKKRVESYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIASEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTK 116
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17604.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 25
0 1 Expect = 7.61e-72 / Id = 100.00 Expect = 1.50e-63 / Id = 87.93 Expect = 2.32e-62 / Id = 88.89 Expect = 9.69e-61 / Id = 85.34 Expect = 1.14e-60 / Id = 85.59 Expect = 1.58e-60 / Id = 88.89 Expect = 5.98e-60 / Id = 84.48 Expect = 2.86e-59 / Id = 86.21 Expect = 3.77e-57 / Id = 83.33 Expect = 1.35e-56 / Id = 85.71 Sequence D7FWI8_ECTSI A0A6U0X3U9_9STRA A0A836CJ22_9STRA H2B_OLILU A0A485K2U0_9STRA A0A836CJT3_9STRA B7FWR8_PHATC A0A6U6DWX5_9STRA B8BX20_THAPS A0A7S2U5X6_9STRA Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1 Stop 1 Cds size 351 Model size 351 Exons 1 Hectar predicted targeting category other localisation BRITE ko00000,ko00001,ko03036,ko04147 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. B EggNOG OGs KOG1744@1,KOG1744@2759 EggNOG free text desc. protein heterodimerization activity GOs GO:0000228,GO:0000785,GO:0000786,GO:0000788,GO:0000790,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005657,GO:0005694,GO:0006325,GO:0006333,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0031298,GO:0031974,GO:0031981,GO:0032991,GO:0032993,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044815,GO:0051276,GO:0070013,GO:0071840,GO:0097159,GO:1901363 KEGG Pathway ko05034,ko05203,ko05322,map05034,map05203,map05322 KEGG ko ko:K11252 Seed eggNOG ortholog 2880.D7FWI8 Seed ortholog evalue 6.1e-55 Seed ortholog score 219.9 Taxonomic scope Eukaryota
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622936537.0737534-CDS-E-siliculosus-1a_M_contig96:458821..459172 1622936537.0737534-CDS-E-siliculosus-1a_M_contig96:458821..459172 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig96 458822..459172 + 1696251121.7598085-CDS-E-siliculosus-1a_M_contig96:458821..459172 1696251121.7598085-CDS-E-siliculosus-1a_M_contig96:458821..459172 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig96 458822..459172 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig96.17604.1
>prot_E-siliculosus-1a_M_contig96.17604.1 ID=prot_E-siliculosus-1a_M_contig96.17604.1|Name=mRNA_E-siliculosus-1a_M_contig96.17604.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=117bp
MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRG back to top mRNA from alignment at E-siliculosus-1a_M_contig96:458822..459172+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig96.17604.1 ID=mRNA_E-siliculosus-1a_M_contig96.17604.1|Name=mRNA_E-siliculosus-1a_M_contig96.17604.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=351bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:458822..459172+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)ATGGCCAAGACCCCCTCCAAGAAGTCCGCCAAGGCGCCCAAGAAGGCCGG
TGACAAGAAGAGGACCAACAAGAGGACCGAGTCGTACTCGTCGTACATCT
ACAAGGTGCTCAAGCAGGTCCACCCCGACACCGGTATCTCCAAGCGCGGC
ATGTCCATCATGAACTCGTTCATCAACGATGTGTTCGAGCGCGTGGCCGG
CGAGTCCGGCAAGCTCACCCGCTACAACAAGAAGGCGACCCTGTCCTCCC
GCGAGGTCCAGACCGCCGTGCGCCTCATGCTTCCCGGAGAGCTCGCCAAG
CACGCCGTGTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCGTCCTA
A back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig96:458822..459172+
>mRNA_E-siliculosus-1a_M_contig96.17604.1 ID=mRNA_E-siliculosus-1a_M_contig96.17604.1|Name=mRNA_E-siliculosus-1a_M_contig96.17604.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=702bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:458822..459172+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male) back to top